RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 SRPX2O60687 465 aaPredicted RBP4.49□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF432O94892 652 aa4.49□□□□□ -1.69
SMAD4-202ENST00000398417 HEXBP07686 556 aa4.49□□□□□ -1.69
SMAD4-202ENST00000398417 NGFRP08138 427 aa4.49□□□□□ -1.69
SMAD4-202ENST00000398417 EPXP11678 715 aa4.49□□□□□ -1.69
SMAD4-202ENST00000398417 NDUFB7P17568 137 aa4.49□□□□□ -1.69
SMAD4-202ENST00000398417 ADAM8P78325 824 aa4.49□□□□□ -1.69
SMAD4-202ENST00000398417 SP5Q6BEB4 398 aaPredicted RBP4.49□□□□□ -1.69
SMAD4-202ENST00000398417 TIPARPQ7Z3E1 657 aaKnown RBP4.49□□□□□ -1.69
SMAD4-202ENST00000398417 OR10AC1Q8NH08 325 aa4.49□□□□□ -1.69
SMAD4-202ENST00000398417 MFSD8Q8NHS3 518 aa4.49□□□□□ -1.69
SMAD4-202ENST00000398417 NPRL2Q8WTW4 380 aa4.49□□□□□ -1.69
SMAD4-202ENST00000398417 PELI1Q96FA3 418 aa4.49□□□□□ -1.69
SMAD4-202ENST00000398417 INTS14Q96SY0 518 aa4.49□□□□□ -1.69
SMAD4-202ENST00000398417 DDOQ99489 341 aa4.49□□□□□ -1.69
SMAD4-202ENST00000398417 C12orf4Q9NQ89 552 aa4.49□□□□□ -1.69
SMAD4-202ENST00000398417 SLCO1B1Q9Y6L6 691 aa4.49□□□□□ -1.69
SMAD4-202ENST00000398417 MEIKINA0A087WXM9 373 aa4.49□□□□□ -1.69
SMAD4-202ENST00000398417 OR6C68A6NDL8 312 aa4.49□□□□□ -1.69
SMAD4-202ENST00000398417 ARPC5O15511 151 aa4.49□□□□□ -1.69
SMAD4-202ENST00000398417 BEX5Q5H9J7 111 aa4.49□□□□□ -1.69
SMAD4-202ENST00000398417 KHDC1LQ5JSQ8 128 aa4.49□□□□□ -1.69
SMAD4-202ENST00000398417 CBLN3Q6UW01 205 aa4.49□□□□□ -1.69
SMAD4-202ENST00000398417 NAXEQ8NCW5 288 aa4.49□□□□□ -1.69
SMAD4-202ENST00000398417 TCTEX1D2Q8WW35 142 aa4.49□□□□□ -1.69
SMAD4-202ENST00000398417 FAM46BQ96A09 425 aa4.49□□□□□ -1.69
SMAD4-202ENST00000398417 KCTD12Q96CX2 325 aaKnown RBP4.49□□□□□ -1.69
SMAD4-202ENST00000398417 TM4SF19Q96DZ7 209 aa4.49□□□□□ -1.69
SMAD4-202ENST00000398417 SLC25A44Q96H78 314 aaPredicted RBP4.49□□□□□ -1.69
SMAD4-202ENST00000398417 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.49□□□□□ -1.69
SMAD4-202ENST00000398417 UBQLN4Q9NRR5 601 aa4.49□□□□□ -1.69
SMAD4-202ENST00000398417 OR5V1Q9UGF6 321 aa4.49□□□□□ -1.69
SMAD4-202ENST00000398417 SCP2D1Q9UJQ7 156 aa4.49□□□□□ -1.69
SMAD4-202ENST00000398417 NOP16Q9Y3C1 178 aaKnown RBP4.49□□□□□ -1.69
SMAD4-202ENST00000398417 HS3ST3A1Q9Y663 406 aa4.49□□□□□ -1.69
SMAD4-202ENST00000398417 MYLKQ15746 1914 aa4.49□□□□□ -1.69
SMAD4-202ENST00000398417 A0A087WV48 116 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 IFNA6P05013 189 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 RAB5AP20339 215 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 RIDAP52758 137 aaKnown RBP4.48□□□□□ -1.69
SMAD4-202ENST00000398417 ERVFC1-1P60608 527 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 YPEL5P62699 121 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 RPL18Q07020 188 aaKnown RBP4.48□□□□□ -1.69
SMAD4-202ENST00000398417 P4HA3Q7Z4N8 544 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 GALNT11Q8NCW6 608 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 OR13C3Q8NGS6 347 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 SEC22AQ96IW7 307 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 GPER1Q99527 375 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 CDCA3Q99618 268 aaPredicted RBP4.48□□□□□ -1.69
SMAD4-202ENST00000398417 ACTR6Q9GZN1 396 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 SLC2A4RGQ9NR83 387 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 MOKQ9UQ07 419 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 PLEKHA6Q9Y2H5 1048 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 NAP1L6A6NFF2 107 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 SMIM10L1P0DMW3 83 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 CD226Q15762 336 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 UBE2NLQ5JXB2 153 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 SLC35D3Q5M8T2 416 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 SLC22A10Q63ZE4 541 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 VASNQ6EMK4 673 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 STEAP2Q8NFT2 490 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF417Q8TAU3 575 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 SMIM10Q96HG1 83 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 OR11A1Q9GZK7 315 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 CHODLQ9H9P2 273 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 IFT46Q9NQC8 304 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 HIF1ANQ9NWT6 349 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 TAS2R4Q9NYW5 299 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 ZMIZ1Q9ULJ6 1067 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 PCDHGA9Q9Y5G4 932 aaKnown RBP4.48□□□□□ -1.69
SMAD4-202ENST00000398417 CACNA1EQ15878 2313 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 TRAV36DV7A0A075B6V5 113 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 A0A0G2JK05 382 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 FITM1A5D6W6 292 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 TGFBR3LH3BV60 316 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 PLPP2O43688 288 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 SUSD5O60279 629 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 PNMTP11086 282 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 SRMP19623 302 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 CD34P28906 385 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF117Q03924 483 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 CDNFQ49AH0 187 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 SMUG1Q53HV7 270 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 PXDC1Q5TGL8 231 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 OR10K2Q6IF99 312 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 NHLRC1Q6VVB1 395 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 ASB12Q8WXK4 309 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 KISS1RQ969F8 398 aaPredicted RBP4.48□□□□□ -1.69
SMAD4-202ENST00000398417 MAP6Q96JE9 813 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 AMELYQ99218 206 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 LMF2Q9BU23 707 aaKnown RBP4.48□□□□□ -1.69
SMAD4-202ENST00000398417 PTDSS2Q9BVG9 487 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 TPPP3Q9BW30 176 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF436Q9C0F3 470 aaPredicted RBP4.48□□□□□ -1.69
SMAD4-202ENST00000398417 KLRF1Q9NZS2 232 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 STEAP1Q9UHE8 339 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 WNK1Q9H4A3 2382 aa4.48□□□□□ -1.69
SMAD4-202ENST00000398417 NUPL2O15504 423 aaKnown RBP4.48□□□□□ -1.69
SMAD4-202ENST00000398417 FOXS1O43638 330 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms