RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 ZNF367Q7RTV3 350 aa24.31■■□□□ 1.48
CPNE1-203ENST00000397442 MCEMP1Q8IX19 187 aa24.31■■□□□ 1.48
CPNE1-203ENST00000397442 PHF3Q92576 2039 aaKnown RBP24.31■■□□□ 1.48
CPNE1-203ENST00000397442 MRPL33O75394 65 aaKnown RBP24.3■■□□□ 1.48
CPNE1-203ENST00000397442 SCG5P05408 212 aa24.3■■□□□ 1.48
CPNE1-203ENST00000397442 LAP3P28838 519 aa24.3■■□□□ 1.48
CPNE1-203ENST00000397442 RPS27P42677 84 aaKnown RBP24.3■■□□□ 1.48
CPNE1-203ENST00000397442 KLRB1Q12918 225 aa24.3■■□□□ 1.48
CPNE1-203ENST00000397442 SPHARQ15513 63 aa24.3■■□□□ 1.48
CPNE1-203ENST00000397442 MED22Q15528 200 aa24.3■■□□□ 1.48
CPNE1-203ENST00000397442 ZC3HAV1Q7Z2W4 902 aaKnown RBP24.3■■□□□ 1.48
CPNE1-203ENST00000397442 OR6N2Q8NGY6 317 aa24.3■■□□□ 1.48
CPNE1-203ENST00000397442 COG8Q96MW5 612 aa24.3■■□□□ 1.48
CPNE1-203ENST00000397442 ALG8Q9BVK2 526 aa24.3■■□□□ 1.48
CPNE1-203ENST00000397442 YIPF3Q9GZM5 350 aa24.3■■□□□ 1.48
CPNE1-203ENST00000397442 ASF1BQ9NVP2 202 aa24.3■■□□□ 1.48
CPNE1-203ENST00000397442 KLHDC2Q9Y2U9 406 aa24.3■■□□□ 1.48
CPNE1-203ENST00000397442 TPRP12270 2363 aaKnown RBP24.3■■□□□ 1.48
CPNE1-203ENST00000397442 HRGP04196 525 aa24.3■■□□□ 1.48
CPNE1-203ENST00000397442 PSMB9P28065 219 aa24.3■■□□□ 1.48
CPNE1-203ENST00000397442 WNT4P56705 351 aa24.3■■□□□ 1.48
CPNE1-203ENST00000397442 ZNF585AQ6P3V2 769 aa24.3■■□□□ 1.48
CPNE1-203ENST00000397442 LINGO2Q7L985 606 aa24.3■■□□□ 1.48
CPNE1-203ENST00000397442 DPY19L4Q7Z388 723 aa24.3■■□□□ 1.48
CPNE1-203ENST00000397442 GPR141Q7Z602 305 aa24.3■■□□□ 1.48
CPNE1-203ENST00000397442 OR52N1Q8NH53 320 aa24.3■■□□□ 1.48
CPNE1-203ENST00000397442 ZNF837Q96EG3 531 aaPredicted RBP24.3■■□□□ 1.48
CPNE1-203ENST00000397442 ULBP2Q9BZM5 246 aa24.3■■□□□ 1.48
CPNE1-203ENST00000397442 PARPBPQ9NWS1 579 aa24.3■■□□□ 1.48
CPNE1-203ENST00000397442 ZNF593O00488 134 aaPredicted RBP24.29■■□□□ 1.48
CPNE1-203ENST00000397442 AGTR1P30556 359 aa24.29■■□□□ 1.48
CPNE1-203ENST00000397442 CDAP32320 146 aa24.29■■□□□ 1.48
CPNE1-203ENST00000397442 NUFIP2Q7Z417 695 aaKnown RBP24.29■■□□□ 1.48
CPNE1-203ENST00000397442 P4HA3Q7Z4N8 544 aa24.29■■□□□ 1.48
CPNE1-203ENST00000397442 ZSCAN2Q7Z7L9 614 aaPredicted RBP24.29■■□□□ 1.48
CPNE1-203ENST00000397442 KLHL36Q8N4N3 616 aa24.29■■□□□ 1.48
CPNE1-203ENST00000397442 WNT2BQ93097 391 aa24.29■■□□□ 1.48
CPNE1-203ENST00000397442 ISG20L2Q9H9L3 353 aaKnown RBP24.29■■□□□ 1.48
CPNE1-203ENST00000397442 CAB39Q9Y376 341 aaPredicted RBP24.29■■□□□ 1.48
CPNE1-203ENST00000397442 A0A1W2PPL8 197 aa24.28■■□□□ 1.48
CPNE1-203ENST00000397442 PRR32B1ATL7 298 aa24.28■■□□□ 1.48
CPNE1-203ENST00000397442 DHHO43323 396 aa24.28■■□□□ 1.48
CPNE1-203ENST00000397442 ENTPD1P49961 510 aa24.28■■□□□ 1.48
CPNE1-203ENST00000397442 ADAM8P78325 824 aa24.28■■□□□ 1.48
CPNE1-203ENST00000397442 GUSBP1Q15486 140 aa24.28■■□□□ 1.48
CPNE1-203ENST00000397442 PCK2Q16822 640 aa24.28■■□□□ 1.48
CPNE1-203ENST00000397442 TIGD6Q17RP2 521 aa24.28■■□□□ 1.48
CPNE1-203ENST00000397442 FOXB2Q5VYV0 432 aa24.28■■□□□ 1.48
CPNE1-203ENST00000397442 NSUN5P2Q63ZY6 315 aa24.28■■□□□ 1.48
CPNE1-203ENST00000397442 ZNF322Q6U7Q0 402 aaPredicted RBP24.28■■□□□ 1.48
CPNE1-203ENST00000397442 PCSK4Q6UW60 755 aa24.28■■□□□ 1.48
CPNE1-203ENST00000397442 FOXL2NBQ6ZUU3 175 aa24.28■■□□□ 1.48
CPNE1-203ENST00000397442 OTOSQ8NHW6 89 aa24.28■■□□□ 1.48
CPNE1-203ENST00000397442 GATAD2BQ8WXI9 593 aa24.28■■□□□ 1.48
CPNE1-203ENST00000397442 C11orf40Q8WZ69 217 aa24.28■■□□□ 1.48
CPNE1-203ENST00000397442 GMPPAQ96IJ6 420 aaPredicted RBP24.28■■□□□ 1.48
CPNE1-203ENST00000397442 MGLLQ99685 303 aa24.28■■□□□ 1.48
CPNE1-203ENST00000397442 TTTY10Q9BZA0 68 aa24.28■■□□□ 1.48
CPNE1-203ENST00000397442 FREM1Q5H8C1 2179 aa24.28■■□□□ 1.48
CPNE1-203ENST00000397442 SS18L1O75177 396 aaPredicted RBP24.27■■□□□ 1.48
CPNE1-203ENST00000397442 ALOX5APP20292 161 aa24.27■■□□□ 1.48
CPNE1-203ENST00000397442 RIPPLY2Q5TAB7 128 aa24.27■■□□□ 1.48
CPNE1-203ENST00000397442 TSPO2Q5TGU0 170 aa24.27■■□□□ 1.48
CPNE1-203ENST00000397442 RTL6Q6ICC9 239 aa24.27■■□□□ 1.48
CPNE1-203ENST00000397442 RPTNQ6XPR3 784 aa24.27■■□□□ 1.48
CPNE1-203ENST00000397442 C9orf106Q8NAJ2 232 aa24.27■■□□□ 1.48
CPNE1-203ENST00000397442 FAM57AQ8TBR7 257 aa24.27■■□□□ 1.48
CPNE1-203ENST00000397442 ALKBH3Q96Q83 286 aaPredicted RBP24.27■■□□□ 1.48
CPNE1-203ENST00000397442 RBM38Q9H0Z9 239 aaKnown RBP24.27■■□□□ 1.48
CPNE1-203ENST00000397442 SLCO5A1Q9H2Y9 848 aa24.27■■□□□ 1.48
CPNE1-203ENST00000397442 GLRX2Q9NS18 164 aa24.27■■□□□ 1.48
CPNE1-203ENST00000397442 KCNG2Q9UJ96 466 aa24.27■■□□□ 1.48
CPNE1-203ENST00000397442 DOCK7Q96N67 2140 aa24.27■■□□□ 1.48
CPNE1-203ENST00000397442 CD8B2A6NJW9 211 aa24.27■■□□□ 1.48
CPNE1-203ENST00000397442 TPOP07202 933 aa24.27■■□□□ 1.48
CPNE1-203ENST00000397442 TEX30Q5JUR7 227 aa24.27■■□□□ 1.48
CPNE1-203ENST00000397442 GPR137CQ8N3F9 429 aa24.27■■□□□ 1.48
CPNE1-203ENST00000397442 SPRYD4Q8WW59 207 aaPredicted RBP24.27■■□□□ 1.48
CPNE1-203ENST00000397442 HTRA1Q92743 480 aa24.27■■□□□ 1.48
CPNE1-203ENST00000397442 OPALINQ96PE5 141 aa24.27■■□□□ 1.48
CPNE1-203ENST00000397442 MNTQ99583 582 aa24.27■■□□□ 1.48
CPNE1-203ENST00000397442 LINC00470Q9BZP3 86 aa24.27■■□□□ 1.48
CPNE1-203ENST00000397442 SEC61A2Q9H9S3 476 aa24.27■■□□□ 1.48
CPNE1-203ENST00000397442 CRLF2Q9HC73 371 aa24.27■■□□□ 1.48
CPNE1-203ENST00000397442 ZNF670-ZNF695F2Z2N8 137 aa24.26■■□□□ 1.47
CPNE1-203ENST00000397442 MAGEB4O15481 346 aaPredicted RBP24.26■■□□□ 1.47
CPNE1-203ENST00000397442 LALBAP00709 142 aa24.26■■□□□ 1.47
CPNE1-203ENST00000397442 SFTPCP11686 197 aa24.26■■□□□ 1.47
CPNE1-203ENST00000397442 LIPAP38571 399 aa24.26■■□□□ 1.47
CPNE1-203ENST00000397442 LY6DQ14210 128 aa24.26■■□□□ 1.47
CPNE1-203ENST00000397442 KCNMB1Q16558 191 aa24.26■■□□□ 1.47
CPNE1-203ENST00000397442 CDONQ4KMG0 1287 aa24.26■■□□□ 1.47
CPNE1-203ENST00000397442 ZNF684Q5T5D7 378 aa24.26■■□□□ 1.47
CPNE1-203ENST00000397442 SEM1Q6ZVN7 128 aa24.26■■□□□ 1.47
CPNE1-203ENST00000397442 CD163Q86VB7 1156 aa24.26■■□□□ 1.47
CPNE1-203ENST00000397442 AMELYQ99218 206 aa24.26■■□□□ 1.47
CPNE1-203ENST00000397442 POLE4Q9NR33 117 aa24.26■■□□□ 1.47
CPNE1-203ENST00000397442 SLC7A10Q9NS82 523 aa24.26■■□□□ 1.47
CPNE1-203ENST00000397442 FAM215AQ9Y5M1 114 aa24.26■■□□□ 1.47
CPNE1-203ENST00000397442 ATRXP46100 2492 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms