RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 SYNPRQ8TBG9 265 aa21.42■■□□□ 1.02
PABPN1-202ENST00000397276 DNASE2BQ8WZ79 361 aa21.42■■□□□ 1.02
PABPN1-202ENST00000397276 CHRDQ9H2X0 955 aa21.42■■□□□ 1.02
PABPN1-202ENST00000397276 TAS2R10Q9NYW0 307 aa21.42■■□□□ 1.02
PABPN1-202ENST00000397276 TRAV8-7A0A075B6U6 113 aa21.42■■□□□ 1.02
PABPN1-202ENST00000397276 POM121CA8CG34 1229 aa21.42■■□□□ 1.02
PABPN1-202ENST00000397276 ATP6V1G2-DDX39BF2Z307 99 aa21.42■■□□□ 1.02
PABPN1-202ENST00000397276 H0YC42 278 aa21.42■■□□□ 1.02
PABPN1-202ENST00000397276 NUPL2O15504 423 aaKnown RBP21.42■■□□□ 1.02
PABPN1-202ENST00000397276 OR6A2O95222 327 aa21.42■■□□□ 1.02
PABPN1-202ENST00000397276 FAM69AQ5T7M9 428 aa21.42■■□□□ 1.02
PABPN1-202ENST00000397276 C1orf140Q5VVS0 124 aa21.42■■□□□ 1.02
PABPN1-202ENST00000397276 TMEM81Q6P7N7 255 aa21.42■■□□□ 1.02
PABPN1-202ENST00000397276 ZNF574Q6ZN55 896 aaPredicted RBP21.42■■□□□ 1.02
PABPN1-202ENST00000397276 BTN2A1Q7KYR7 527 aa21.42■■□□□ 1.02
PABPN1-202ENST00000397276 PRSS35Q8N3Z0 413 aa21.42■■□□□ 1.02
PABPN1-202ENST00000397276 GPR119Q8TDV5 335 aa21.42■■□□□ 1.02
PABPN1-202ENST00000397276 OIT3Q8WWZ8 545 aa21.42■■□□□ 1.02
PABPN1-202ENST00000397276 PHYHIPQ92561 330 aa21.42■■□□□ 1.02
PABPN1-202ENST00000397276 TMEM106AQ96A25 262 aa21.42■■□□□ 1.02
PABPN1-202ENST00000397276 NKX3-1Q99801 234 aaPredicted RBP21.42■■□□□ 1.02
PABPN1-202ENST00000397276 OR10A4Q9H209 315 aa21.42■■□□□ 1.02
PABPN1-202ENST00000397276 OR5V1Q9UGF6 321 aa21.42■■□□□ 1.02
PABPN1-202ENST00000397276 MAB21L2Q9Y586 359 aa21.42■■□□□ 1.02
PABPN1-202ENST00000397276 A0A1W2PQD3 144 aa21.42■■□□□ 1.02
PABPN1-202ENST00000397276 FADS1O60427 444 aa21.42■■□□□ 1.02
PABPN1-202ENST00000397276 ALDOBP05062 364 aa21.42■■□□□ 1.02
PABPN1-202ENST00000397276 LCN1P31025 176 aa21.42■■□□□ 1.02
PABPN1-202ENST00000397276 VEGFCP49767 419 aa21.42■■□□□ 1.02
PABPN1-202ENST00000397276 POLR2HP52434 150 aaKnown RBP21.42■■□□□ 1.02
PABPN1-202ENST00000397276 TMPRSS12Q86WS5 348 aa21.42■■□□□ 1.02
PABPN1-202ENST00000397276 ZNF417Q8TAU3 575 aa21.42■■□□□ 1.02
PABPN1-202ENST00000397276 ZNF587Q96SQ5 575 aaPredicted RBP21.42■■□□□ 1.02
PABPN1-202ENST00000397276 C20orf85Q9H1P6 137 aa21.42■■□□□ 1.02
PABPN1-202ENST00000397276 KLK11Q9UBX7 282 aa21.42■■□□□ 1.02
PABPN1-202ENST00000397276 B9D1Q9UPM9 204 aa21.42■■□□□ 1.02
PABPN1-202ENST00000397276 HLA-DOBP13765 273 aa21.41■■□□□ 1.02
PABPN1-202ENST00000397276 TUSC1Q2TAM9 212 aa21.41■■□□□ 1.02
PABPN1-202ENST00000397276 SEC22CQ9BRL7 303 aa21.41■■□□□ 1.02
PABPN1-202ENST00000397276 MFRPQ9BY79 579 aa21.41■■□□□ 1.02
PABPN1-202ENST00000397276 SLITRK2Q9H156 845 aa21.41■■□□□ 1.02
PABPN1-202ENST00000397276 ELOVL3Q9HB03 270 aa21.41■■□□□ 1.02
PABPN1-202ENST00000397276 A0A1B0GVI7 797 aa21.41■■□□□ 1.02
PABPN1-202ENST00000397276 SPARCP09486 303 aa21.41■■□□□ 1.02
PABPN1-202ENST00000397276 KLF9Q13886 244 aaPredicted RBP21.41■■□□□ 1.02
PABPN1-202ENST00000397276 ZNF441Q8N8Z8 693 aa21.41■■□□□ 1.02
PABPN1-202ENST00000397276 OR11G2Q8NGC1 345 aa21.41■■□□□ 1.02
PABPN1-202ENST00000397276 OR52I2Q8NH67 350 aa21.41■■□□□ 1.02
PABPN1-202ENST00000397276 DUSP15Q9H1R2 295 aaPredicted RBP21.41■■□□□ 1.02
PABPN1-202ENST00000397276 RCE1Q9Y256 329 aa21.41■■□□□ 1.02
PABPN1-202ENST00000397276 VDAC3Q9Y277 283 aa21.41■■□□□ 1.02
PABPN1-202ENST00000397276 PRSS37A4D1T9 235 aa21.4■■□□□ 1.02
PABPN1-202ENST00000397276 OR4C45A6NMZ5 311 aa21.4■■□□□ 1.02
PABPN1-202ENST00000397276 RPL27P61353 136 aaKnown RBP21.4■■□□□ 1.02
PABPN1-202ENST00000397276 INSM1Q01101 510 aaPredicted RBP21.4■■□□□ 1.02
PABPN1-202ENST00000397276 PLA2G7Q13093 441 aa21.4■■□□□ 1.02
PABPN1-202ENST00000397276 SHBQ15464 509 aa21.4■■□□□ 1.02
PABPN1-202ENST00000397276 SGCBQ16585 318 aa21.4■■□□□ 1.02
PABPN1-202ENST00000397276 FAAP20Q6NZ36 180 aa21.4■■□□□ 1.02
PABPN1-202ENST00000397276 SMIM4Q8WVI0 70 aa21.4■■□□□ 1.02
PABPN1-202ENST00000397276 SHDQ96IW2 340 aa21.4■■□□□ 1.02
PABPN1-202ENST00000397276 CXorf58Q96LI9 332 aa21.4■■□□□ 1.02
PABPN1-202ENST00000397276 OR6C1Q96RD1 312 aa21.4■■□□□ 1.02
PABPN1-202ENST00000397276 CA10Q9NS85 328 aa21.4■■□□□ 1.02
PABPN1-202ENST00000397276 PTTG3PQ9NZH4 202 aa21.4■■□□□ 1.02
PABPN1-202ENST00000397276 KCNMB2Q9Y691 235 aa21.4■■□□□ 1.02
PABPN1-202ENST00000397276 CEP192Q8TEP8 1941 aa21.4■■□□□ 1.02
PABPN1-202ENST00000397276 ASCC3Q8N3C0 2202 aaKnown RBP21.4■■□□□ 1.02
PABPN1-202ENST00000397276 SOX1O00570 391 aaPredicted RBP21.4■■□□□ 1.02
PABPN1-202ENST00000397276 TMIGD3P0DMS9 266 aaPredicted RBP21.4■■□□□ 1.02
PABPN1-202ENST00000397276 CTLA4P16410 223 aa21.4■■□□□ 1.02
PABPN1-202ENST00000397276 CXCL12P48061 93 aa21.4■■□□□ 1.02
PABPN1-202ENST00000397276 ZMYND11Q15326 602 aa21.4■■□□□ 1.02
PABPN1-202ENST00000397276 SFRP5Q5T4F7 317 aa21.4■■□□□ 1.02
PABPN1-202ENST00000397276 OTOSQ8NHW6 89 aa21.4■■□□□ 1.02
PABPN1-202ENST00000397276 SFXN2Q96NB2 322 aa21.4■■□□□ 1.02
PABPN1-202ENST00000397276 COMMD4Q9H0A8 199 aa21.4■■□□□ 1.02
PABPN1-202ENST00000397276 A8MVM7 634 aa21.39■■□□□ 1.02
PABPN1-202ENST00000397276 DOK2O60496 412 aa21.39■■□□□ 1.02
PABPN1-202ENST00000397276 MPZL1O95297 269 aa21.39■■□□□ 1.02
PABPN1-202ENST00000397276 FBXO45P0C2W1 286 aa21.39■■□□□ 1.02
PABPN1-202ENST00000397276 CXCL2P19875 107 aa21.39■■□□□ 1.02
PABPN1-202ENST00000397276 OPCMLQ14982 345 aa21.39■■□□□ 1.02
PABPN1-202ENST00000397276 WDR74Q6RFH5 385 aaPredicted RBP21.39■■□□□ 1.02
PABPN1-202ENST00000397276 MDGA2Q7Z553 956 aa21.39■■□□□ 1.02
PABPN1-202ENST00000397276 ESX1Q8N693 406 aa21.39■■□□□ 1.02
PABPN1-202ENST00000397276 ZNF768Q9H5H4 540 aaKnown RBP21.39■■□□□ 1.02
PABPN1-202ENST00000397276 SLC22A13Q9Y226 551 aa21.39■■□□□ 1.02
PABPN1-202ENST00000397276 ANXA2P2A6NMY6 339 aa21.39■■□□□ 1.01
PABPN1-202ENST00000397276 LGALS8O00214 317 aa21.39■■□□□ 1.01
PABPN1-202ENST00000397276 ANXA2P07355 339 aaKnown RBP21.39■■□□□ 1.01
PABPN1-202ENST00000397276 WDR38Q5JTN6 314 aa21.39■■□□□ 1.01
PABPN1-202ENST00000397276 PWWP2BQ6NUJ5 590 aa21.39■■□□□ 1.01
PABPN1-202ENST00000397276 GUSBP11Q6P575 273 aa21.39■■□□□ 1.01
PABPN1-202ENST00000397276 GRINAQ7Z429 371 aa21.39■■□□□ 1.01
PABPN1-202ENST00000397276 CARFQ8N187 725 aa21.39■■□□□ 1.01
PABPN1-202ENST00000397276 OR56B4Q8NH76 319 aa21.39■■□□□ 1.01
PABPN1-202ENST00000397276 LHFPL5Q8TAF8 219 aa21.39■■□□□ 1.01
PABPN1-202ENST00000397276 SUSD2Q9UGT4 822 aa21.39■■□□□ 1.01
PABPN1-202ENST00000397276 SHISA8B8ZZ34 492 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms