RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 CD8BP10966 210 aa13.3□□□□□ -0.28
CAPN3-207ENST00000397200 GTF2E2P29084 291 aaKnown RBP13.3□□□□□ -0.28
CAPN3-207ENST00000397200 LHX2P50458 406 aa13.3□□□□□ -0.28
CAPN3-207ENST00000397200 CTXN1P60606 82 aa13.3□□□□□ -0.28
CAPN3-207ENST00000397200 MYBPHQ13203 477 aa13.3□□□□□ -0.28
CAPN3-207ENST00000397200 KRTCAP3Q53RY4 240 aa13.3□□□□□ -0.28
CAPN3-207ENST00000397200 FAM69AQ5T7M9 428 aa13.3□□□□□ -0.28
CAPN3-207ENST00000397200 DDI2Q5TDH0 399 aa13.3□□□□□ -0.28
CAPN3-207ENST00000397200 C1QL3Q5VWW1 255 aa13.3□□□□□ -0.28
CAPN3-207ENST00000397200 ZNF324BQ6AW86 544 aaPredicted RBP13.3□□□□□ -0.28
CAPN3-207ENST00000397200 LEG1Q6P5S2 330 aa13.3□□□□□ -0.28
CAPN3-207ENST00000397200 ESPNLQ6ZVH7 1005 aa13.3□□□□□ -0.28
CAPN3-207ENST00000397200 PXKQ7Z7A4 578 aa13.3□□□□□ -0.28
CAPN3-207ENST00000397200 EGFL6Q8IUX8 553 aa13.3□□□□□ -0.28
CAPN3-207ENST00000397200 UBQLNLQ8IYU4 475 aa13.3□□□□□ -0.28
CAPN3-207ENST00000397200 OR5J2Q8NH18 312 aa13.3□□□□□ -0.28
CAPN3-207ENST00000397200 TSPAN32Q96QS1 320 aa13.3□□□□□ -0.28
CAPN3-207ENST00000397200 SNX18Q96RF0 628 aa13.3□□□□□ -0.28
CAPN3-207ENST00000397200 SRRQ9GZT4 340 aa13.3□□□□□ -0.28
CAPN3-207ENST00000397200 TPK1Q9H3S4 243 aa13.3□□□□□ -0.28
CAPN3-207ENST00000397200 SPRR3Q9UBC9 169 aa13.3□□□□□ -0.28
CAPN3-207ENST00000397200 NBEAQ8NFP9 2946 aa13.29□□□□□ -0.28
CAPN3-207ENST00000397200 A0A1W2PNR3 127 aa13.29□□□□□ -0.28
CAPN3-207ENST00000397200 EIF1AYO14602 144 aaKnown RBP13.29□□□□□ -0.28
CAPN3-207ENST00000397200 WISP2O76076 250 aa13.29□□□□□ -0.28
CAPN3-207ENST00000397200 IGHMP01871 453 aa13.29□□□□□ -0.28
CAPN3-207ENST00000397200 ZNF708P17019 499 aa13.29□□□□□ -0.28
CAPN3-207ENST00000397200 CLDN20P56880 219 aa13.29□□□□□ -0.28
CAPN3-207ENST00000397200 KRR1Q13601 381 aaKnown RBP13.29□□□□□ -0.28
CAPN3-207ENST00000397200 INSL4Q14641 139 aa13.29□□□□□ -0.28
CAPN3-207ENST00000397200 CDK5R1Q15078 307 aa13.29□□□□□ -0.28
CAPN3-207ENST00000397200 BCL2A1Q16548 175 aa13.29□□□□□ -0.28
CAPN3-207ENST00000397200 SGCBQ16585 318 aa13.29□□□□□ -0.28
CAPN3-207ENST00000397200 PRR30Q53SZ7 412 aaPredicted RBP13.29□□□□□ -0.28
CAPN3-207ENST00000397200 MESTQ5EB52 335 aa13.29□□□□□ -0.28
CAPN3-207ENST00000397200 PDSS1Q5T2R2 415 aa13.29□□□□□ -0.28
CAPN3-207ENST00000397200 GGNQ86UU5 652 aa13.29□□□□□ -0.28
CAPN3-207ENST00000397200 JAZF1Q86VZ6 243 aa13.29□□□□□ -0.28
CAPN3-207ENST00000397200 GHDCQ8N2G8 530 aa13.29□□□□□ -0.28
CAPN3-207ENST00000397200 MEIOBQ8N635 442 aa13.29□□□□□ -0.28
CAPN3-207ENST00000397200 DRAXINQ8NBI3 349 aaPredicted RBP13.29□□□□□ -0.28
CAPN3-207ENST00000397200 SLC25A36Q96CQ1 311 aa13.29□□□□□ -0.28
CAPN3-207ENST00000397200 PELI1Q96FA3 418 aa13.29□□□□□ -0.28
CAPN3-207ENST00000397200 ATF6BQ99941 703 aa13.29□□□□□ -0.28
CAPN3-207ENST00000397200 RERGLQ9H628 205 aa13.29□□□□□ -0.28
CAPN3-207ENST00000397200 ABCB9Q9NP78 766 aa13.29□□□□□ -0.28
CAPN3-207ENST00000397200 A0A0J9YW62 118 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 A0A1B0GTH9 108 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 J3QLW9 94 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 SULT2B1O00204 365 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 DVL2O14641 736 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 TNFSF11O14788 317 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 ATXN7O15265 892 aaPredicted RBP13.28□□□□□ -0.28
CAPN3-207ENST00000397200 RGS5O15539 181 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 FZD7O75084 574 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 IMPDH2P12268 514 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 ZNF19P17023 458 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 CLDN18P56856 261 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 PPP3R1P63098 170 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 HSF1Q00613 529 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 SRYQ05066 204 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 MFSD13AQ14CX5 517 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 OR7A5Q15622 319 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 CCDC58Q4VC31 144 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 ZNF684Q5T5D7 378 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 ARL9Q6T311 187 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 TMPPEQ6ZT21 453 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 MAMDC2Q7Z304 686 aaPredicted RBP13.28□□□□□ -0.28
CAPN3-207ENST00000397200 MS4A15Q8N5U1 240 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 MFSD8Q8NHS3 518 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 SETD6Q8TBK2 473 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 SMAP2Q8WU79 429 aaPredicted RBP13.28□□□□□ -0.28
CAPN3-207ENST00000397200 SARAFQ96BY9 339 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 SMIM19Q96E16 107 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 MRPL48Q96GC5 212 aaKnown RBP13.28□□□□□ -0.28
CAPN3-207ENST00000397200 SOSTQ9BQB4 213 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 ALG12Q9BV10 488 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 POLE4Q9NR33 117 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 ASF1BQ9NVP2 202 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 TAS2R5Q9NYW4 299 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 COPS3Q9UNS2 423 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 ATRXP46100 2492 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 LIPT2A6NK58 231 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 H0YC42 278 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 SELENOFO60613 162 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 PMS2P2O95744 297 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 HIST1H2ABP04908 130 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 NAA10P41227 235 aaPredicted RBP13.28□□□□□ -0.28
CAPN3-207ENST00000397200 SUCLG1P53597 346 aaKnown RBP13.28□□□□□ -0.28
CAPN3-207ENST00000397200 OR2B6P58173 313 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 CSNK2A1P68400 391 aaPredicted RBP13.28□□□□□ -0.28
CAPN3-207ENST00000397200 C19orf57Q0VDD7 668 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 HBMQ6B0K9 141 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 HIST3H2AQ7L7L0 130 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 SLC16A9Q7RTY1 509 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 OR51L1Q8NGJ5 315 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 OR2V1Q8NHB1 315 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 HIST1H2ACQ93077 130 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 MIB2Q96AX9 1013 aa13.28□□□□□ -0.28
CAPN3-207ENST00000397200 SLX1AQ9BQ83 275 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms