RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 CAMK2DQ13557 499 aa12.71□□□□□ -0.38
SEC13-208ENST00000397109 PGGHGQ32M88 737 aa12.71□□□□□ -0.38
SEC13-208ENST00000397109 SLC35D2Q76EJ3 337 aa12.71□□□□□ -0.38
SEC13-208ENST00000397109 LRRC17Q8N6Y2 441 aa12.71□□□□□ -0.38
SEC13-208ENST00000397109 OR10G2Q8NGC3 310 aa12.71□□□□□ -0.38
SEC13-208ENST00000397109 OR6X1Q8NH79 312 aa12.71□□□□□ -0.38
SEC13-208ENST00000397109 SLC7A13Q8TCU3 470 aa12.71□□□□□ -0.38
SEC13-208ENST00000397109 TMEM255BQ8WV15 326 aa12.71□□□□□ -0.38
SEC13-208ENST00000397109 LIPHQ8WWY8 451 aa12.71□□□□□ -0.38
SEC13-208ENST00000397109 ACOT11Q8WXI4 607 aaPredicted RBP12.71□□□□□ -0.38
SEC13-208ENST00000397109 DGCR14Q96DF8 476 aaKnown RBP12.71□□□□□ -0.38
SEC13-208ENST00000397109 HRASLS5Q96KN8 279 aa12.71□□□□□ -0.38
SEC13-208ENST00000397109 SLC38A2Q96QD8 506 aa12.71□□□□□ -0.38
SEC13-208ENST00000397109 PITX2Q99697 317 aa12.71□□□□□ -0.38
SEC13-208ENST00000397109 KCNS3Q9BQ31 491 aa12.71□□□□□ -0.38
SEC13-208ENST00000397109 DLL4Q9NR61 685 aa12.71□□□□□ -0.38
SEC13-208ENST00000397109 RHCGQ9UBD6 479 aa12.71□□□□□ -0.38
SEC13-208ENST00000397109 CRNNQ9UBG3 495 aaPredicted RBP12.71□□□□□ -0.38
SEC13-208ENST00000397109 A0A096LPE4 126 aa12.7□□□□□ -0.38
SEC13-208ENST00000397109 A0A1W2PPZ6 126 aa12.7□□□□□ -0.38
SEC13-208ENST00000397109 E7EQL1 145 aa12.7□□□□□ -0.38
SEC13-208ENST00000397109 BLOC1S5-TXNDC5H3BN57 136 aa12.7□□□□□ -0.38
SEC13-208ENST00000397109 CCNB2O95067 398 aa12.7□□□□□ -0.38
SEC13-208ENST00000397109 IFNGR1P15260 489 aa12.7□□□□□ -0.38
SEC13-208ENST00000397109 CSNK1A1P48729 337 aa12.7□□□□□ -0.38
SEC13-208ENST00000397109 BIDP55957 195 aa12.7□□□□□ -0.38
SEC13-208ENST00000397109 ESRRGP62508 458 aa12.7□□□□□ -0.38
SEC13-208ENST00000397109 PPP1R8Q12972 351 aaKnown RBP12.7□□□□□ -0.38
SEC13-208ENST00000397109 C6orf141Q5SZD1 244 aa12.7□□□□□ -0.38
SEC13-208ENST00000397109 ZNF544Q6NX49 715 aa12.7□□□□□ -0.38
SEC13-208ENST00000397109 ALDH16A1Q8IZ83 802 aa12.7□□□□□ -0.38
SEC13-208ENST00000397109 RNF113BQ8IZP6 322 aaKnown RBP12.7□□□□□ -0.38
SEC13-208ENST00000397109 FBXL14Q8N1E6 418 aa12.7□□□□□ -0.38
SEC13-208ENST00000397109 PFN4Q8NHR9 129 aa12.7□□□□□ -0.38
SEC13-208ENST00000397109 TRAF4Q9BUZ4 470 aaPredicted RBP12.7□□□□□ -0.38
SEC13-208ENST00000397109 KATNB1Q9BVA0 655 aa12.7□□□□□ -0.38
SEC13-208ENST00000397109 ULBP2Q9BZM5 246 aa12.7□□□□□ -0.38
SEC13-208ENST00000397109 NELFAQ9H3P2 528 aa12.7□□□□□ -0.38
SEC13-208ENST00000397109 PAPOLBQ9NRJ5 636 aaKnown RBP12.7□□□□□ -0.38
SEC13-208ENST00000397109 ATP23Q9Y6H3 246 aa12.7□□□□□ -0.38
SEC13-208ENST00000397109 A0A087WUU8 490 aa12.69□□□□□ -0.38
SEC13-208ENST00000397109 A0A1W2PRG6 482 aa12.69□□□□□ -0.38
SEC13-208ENST00000397109 BCL10O95999 233 aa12.69□□□□□ -0.38
SEC13-208ENST00000397109 CBR1P16152 277 aa12.69□□□□□ -0.38
SEC13-208ENST00000397109 ALDH3B2P48448 385 aa12.69□□□□□ -0.38
SEC13-208ENST00000397109 FABP6P51161 128 aa12.69□□□□□ -0.38
SEC13-208ENST00000397109 SPOCK1Q08629 439 aa12.69□□□□□ -0.38
SEC13-208ENST00000397109 COX10Q12887 443 aa12.69□□□□□ -0.38
SEC13-208ENST00000397109 ETFDHQ16134 617 aa12.69□□□□□ -0.38
SEC13-208ENST00000397109 PHYHD1Q5SRE7 291 aa12.69□□□□□ -0.38
SEC13-208ENST00000397109 ZNF627Q7L945 461 aa12.69□□□□□ -0.38
SEC13-208ENST00000397109 HDDC2Q7Z4H3 204 aa12.69□□□□□ -0.38
SEC13-208ENST00000397109 ZNF837Q96EG3 531 aaPredicted RBP12.69□□□□□ -0.38
SEC13-208ENST00000397109 SLC25A44Q96H78 314 aaPredicted RBP12.69□□□□□ -0.38
SEC13-208ENST00000397109 Q96MF0 132 aa12.69□□□□□ -0.38
SEC13-208ENST00000397109 FEVQ99581 238 aa12.69□□□□□ -0.38
SEC13-208ENST00000397109 CBLN4Q9NTU7 201 aa12.69□□□□□ -0.38
SEC13-208ENST00000397109 GLTPQ9NZD2 209 aa12.69□□□□□ -0.38
SEC13-208ENST00000397109 GMPPBQ9Y5P6 360 aa12.69□□□□□ -0.38
SEC13-208ENST00000397109 IGHV1-18A0A0C4DH31 117 aa12.68□□□□□ -0.38
SEC13-208ENST00000397109 TRBV4-1A0A0J9YWV2 114 aa12.68□□□□□ -0.38
SEC13-208ENST00000397109 SH3PXD2BA1X283 911 aa12.68□□□□□ -0.38
SEC13-208ENST00000397109 CLIC3O95833 236 aa12.68□□□□□ -0.38
SEC13-208ENST00000397109 IGKV3-15P01624 115 aa12.68□□□□□ -0.38
SEC13-208ENST00000397109 IGLV1-44P01699 117 aa12.68□□□□□ -0.38
SEC13-208ENST00000397109 CD8AP01732 235 aa12.68□□□□□ -0.38
SEC13-208ENST00000397109 CRYAAP02489 173 aa12.68□□□□□ -0.38
SEC13-208ENST00000397109 CRHBPP24387 322 aa12.68□□□□□ -0.38
SEC13-208ENST00000397109 ARR3P36575 388 aa12.68□□□□□ -0.38
SEC13-208ENST00000397109 PODNL1Q6PEZ8 512 aa12.68□□□□□ -0.38
SEC13-208ENST00000397109 CD300LDQ6UXZ3 194 aa12.68□□□□□ -0.38
SEC13-208ENST00000397109 MBOAT2Q6ZWT7 520 aa12.68□□□□□ -0.38
SEC13-208ENST00000397109 IL17RDQ8NFM7 739 aa12.68□□□□□ -0.38
SEC13-208ENST00000397109 TMEM54Q969K7 222 aa12.68□□□□□ -0.38
SEC13-208ENST00000397109 C18orf12Q96KH6 178 aa12.68□□□□□ -0.38
SEC13-208ENST00000397109 VCX3AQ9NNX9 186 aa12.68□□□□□ -0.38
SEC13-208ENST00000397109 INIPQ9NRY2 104 aa12.68□□□□□ -0.38
SEC13-208ENST00000397109 C20orf141Q9NUB4 165 aa12.68□□□□□ -0.38
SEC13-208ENST00000397109 MOKQ9UQ07 419 aa12.68□□□□□ -0.38
SEC13-208ENST00000397109 TPRKBQ9Y3C4 175 aa12.68□□□□□ -0.38
SEC13-208ENST00000397109 ZNF469Q96JG9 3925 aaPredicted RBP12.68□□□□□ -0.38
SEC13-208ENST00000397109 VPS13CQ709C8 3753 aa12.67□□□□□ -0.38
SEC13-208ENST00000397109 C2CD3Q4AC94 2353 aa12.67□□□□□ -0.38
SEC13-208ENST00000397109 CENPBD1B2RD01 187 aa12.67□□□□□ -0.38
SEC13-208ENST00000397109 MCIDASD6RGH6 385 aa12.67□□□□□ -0.38
SEC13-208ENST00000397109 MPZL2O60487 215 aa12.67□□□□□ -0.38
SEC13-208ENST00000397109 IGHG1P01857 330 aa12.67□□□□□ -0.38
SEC13-208ENST00000397109 TSPAN19P0C672 248 aa12.67□□□□□ -0.38
SEC13-208ENST00000397109 BMP4P12644 408 aa12.67□□□□□ -0.38
SEC13-208ENST00000397109 ATP6V1B1P15313 513 aa12.67□□□□□ -0.38
SEC13-208ENST00000397109 APOBEC3AP31941 199 aaPredicted RBP12.67□□□□□ -0.38
SEC13-208ENST00000397109 IFNGR2P38484 337 aa12.67□□□□□ -0.38
SEC13-208ENST00000397109 DAP3P51398 398 aaKnown RBP12.67□□□□□ -0.38
SEC13-208ENST00000397109 TUBA1BP68363 451 aa12.67□□□□□ -0.38
SEC13-208ENST00000397109 RPL18Q07020 188 aaKnown RBP12.67□□□□□ -0.38
SEC13-208ENST00000397109 CD47Q08722 323 aa12.67□□□□□ -0.38
SEC13-208ENST00000397109 CDK5R2Q13319 367 aa12.67□□□□□ -0.38
SEC13-208ENST00000397109 SEC23BQ15437 767 aa12.67□□□□□ -0.38
SEC13-208ENST00000397109 FGD3Q5JSP0 725 aa12.67□□□□□ -0.38
SEC13-208ENST00000397109 ZNF770Q6IQ21 691 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms