RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 GDI1P31150 447 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 EEF1A1P5Q5VTE0 462 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.56□□□□□ -0.4
NUP98-204ENST00000397004 JAZF1Q86VZ6 243 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 EXO5Q9H790 373 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 CGGBP1Q9UFW8 167 aaPredicted RBP12.56□□□□□ -0.4
NUP98-204ENST00000397004 B9D1Q9UPM9 204 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 AQP8O94778 261 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 GUSBP08236 651 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 CSF1P09603 554 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 AKAIN1P0CW23 69 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 ADCYAP1P18509 176 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 ZNF10P21506 573 aaPredicted RBP12.56□□□□□ -0.4
NUP98-204ENST00000397004 MED25Q71SY5 747 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 TMED4Q7Z7H5 227 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 C7orf61Q8IZ16 206 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 OR10K1Q8NGX5 313 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 SEC22AQ96IW7 307 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 ADAT1Q9BUB4 502 aaKnown RBP12.56□□□□□ -0.4
NUP98-204ENST00000397004 FAM117AQ9C073 453 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 SFXN1Q9H9B4 322 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 CPNE7Q9UBL6 633 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 APODP05090 189 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 POU2F2P09086 479 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 EFNA3P52797 238 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 ITPRIPL2Q3MIP1 535 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 CHRDL2Q6WN34 429 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 MOB3CQ70IA8 216 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 ZNF227Q86WZ6 799 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 C10orf53Q8N6V4 93 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 GPR148Q8TDV2 347 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 LRRC46Q96FV0 321 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 KLK13Q9UKR3 277 aa12.56□□□□□ -0.4
NUP98-204ENST00000397004 KIF26BQ2KJY2 2108 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 PCDH15Q96QU1 1955 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 TACSTD2P09758 323 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 LIN54Q6MZP7 749 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 TMEM184AQ6ZMB5 413 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 ZNF546Q86UE3 836 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 FAM160A2Q8N612 972 aaPredicted RBP12.55□□□□□ -0.4
NUP98-204ENST00000397004 PXT1Q8NFP0 134 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 SLC37A2Q8TED4 501 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 WDR92Q96MX6 357 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 DCBLD2Q96PD2 775 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 SLC6A7Q99884 636 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 MRI1Q9BV20 369 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 OR10A5Q9H207 317 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 MED11Q9P086 117 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 UBE2QL1A1L167 161 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 MPZL1O95297 269 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 IFI6P09912 130 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 ZNF28P17035 718 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 UBE2IP63279 158 aaKnown RBP12.55□□□□□ -0.4
NUP98-204ENST00000397004 SRSF3P84103 164 aaKnown RBP12.55□□□□□ -0.4
NUP98-204ENST00000397004 DHRS2Q13268 280 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 MPPED2Q15777 294 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 LRRC37A5PQ49AS3 106 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 ELP2Q6IA86 826 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 ZNF417Q8TAU3 575 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 ATG5Q9H1Y0 275 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 ELOVL3Q9HB03 270 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 PRSS3P35030 304 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 LUMP51884 338 aaPredicted RBP12.55□□□□□ -0.4
NUP98-204ENST00000397004 SQSTM1Q13501 440 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 FAM220AQ7Z4H9 259 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 OTOSQ8NHW6 89 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 ASB5Q8WWX0 329 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 RBM18Q96H35 190 aaKnown RBP12.55□□□□□ -0.4
NUP98-204ENST00000397004 SLITRK2Q9H156 845 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 FN3KRPQ9HA64 309 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 VSIG4Q9Y279 399 aa12.55□□□□□ -0.4
NUP98-204ENST00000397004 CPAMD8Q8IZJ3 1885 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 ELOA3DA6NLF2 546 aaPredicted RBP12.54□□□□□ -0.4
NUP98-204ENST00000397004 SLC17A2O00624 439 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 C4BPBP20851 252 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 IL32P24001 234 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 MAPK3P27361 379 aaPredicted RBP12.54□□□□□ -0.4
NUP98-204ENST00000397004 CCR4P51679 360 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 AKR1C2P52895 323 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 IGLV3-21P80748 117 aaPredicted RBP12.54□□□□□ -0.4
NUP98-204ENST00000397004 AKR1C1Q04828 323 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 FUT7Q11130 342 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 ELOA3BQ3SY89 546 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 RNF144BQ7Z419 303 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 ELOA3Q8NG57 546 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 OR10Z1Q8NGY1 313 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 EPHA6Q9UF33 1036 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 A0A0J9YY10 115 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 OR5H14A6NHG9 310 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 TMEM212A6NML5 194 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 TMEM127O75204 238 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 CD8AP01732 235 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 MELTFP08582 738 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 ZNHIT3Q15649 155 aaPredicted RBP12.54□□□□□ -0.4
NUP98-204ENST00000397004 LYPD6Q86Y78 171 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 EDEM2Q9BV94 578 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 ALX4Q9H161 411 aaPredicted RBP12.54□□□□□ -0.4
NUP98-204ENST00000397004 SPACA6W5XKT8 324 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 A0A1W2PPC1 479 aa12.54□□□□□ -0.4
NUP98-204ENST00000397004 TMEM82A0PJX8 343 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms