RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 TMEM53Q6P2H8 277 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 TSSK4Q6SA08 328 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 CDH26Q8IXH8 852 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 GATSQ8NAP1 163 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 LIPHQ8WWY8 451 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 OR2B2Q9GZK3 357 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 OBP2BQ9NPH6 170 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 SEMA5BQ9P283 1151 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 TMEM72A0PK05 275 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 OR6C6A6NF89 314 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 IFITM5A6NNB3 132 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 WBP4O75554 376 aaKnown RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 CBX7O95931 251 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 TK1P04183 234 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 IL7P13232 177 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 MAT1AQ00266 395 aaKnown RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 MEP1BQ16820 701 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 ZXDCQ2QGD7 858 aaPredicted RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 ACER2Q5QJU3 275 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF770Q6IQ21 691 aaPredicted RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 SFXN4Q6P4A7 337 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 GTPBP8Q8N3Z3 284 aaPredicted RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 SPERTQ8NA61 448 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 CPEB3Q8NE35 698 aaKnown RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 NINJ1Q92982 152 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 HINT3Q9NQE9 182 aaKnown RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 MBD1Q9UIS9 605 aaPredicted RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 C14orf166Q9Y224 244 aaKnown RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 A0A1W2PPL8 197 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 AQP7P3A6NL99 342 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 FOXS1O43638 330 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 FZD7O75084 574 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 SCAF4O95104 1147 aaKnown RBP3.07□□□□□ -1.92
VPS13C-203ENST00000395896 HPP00738 406 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 MAN2A2P49641 1150 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 SMN1Q16637 294 aaKnown RBP3.07□□□□□ -1.92
VPS13C-203ENST00000395896 IQCF1Q8N6M8 205 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 OTOSQ8NHW6 89 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 FAM46BQ96A09 425 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF160Q9HCG1 818 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 N6AMT1Q9Y5N5 214 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 LINC00854A0A1B0GVQ3 168 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 DHRS7CA6NNS2 312 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 M0R082 166 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 LYRM1O43325 122 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 SPI1P17947 270 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 ATP1B3P54709 279 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 RPL18Q07020 188 aaKnown RBP3.07□□□□□ -1.92
VPS13C-203ENST00000395896 SGCAQ16586 387 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 ABCA11PQ4W5N1 156 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 VASNQ6EMK4 673 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 THOC7Q6I9Y2 204 aaKnown RBP3.07□□□□□ -1.92
VPS13C-203ENST00000395896 KIRREL2Q6UWL6 708 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 CCDC71LQ8N9Z2 235 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 APH1AQ96BI3 265 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 CCDC74BQ96LY2 380 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 C10orf90Q96M02 699 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 APMAPQ9HDC9 416 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF275Q9NSD4 429 aaPredicted RBP3.07□□□□□ -1.92
VPS13C-203ENST00000395896 LAMP3Q9UQV4 416 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 CFAP54Q96N23 3096 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 ICOSLGO75144 302 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 IGKV3-11P04433 115 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 CD3GP09693 182 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 HOXB1P14653 301 aaPredicted RBP3.07□□□□□ -1.92
VPS13C-203ENST00000395896 CDK5R1Q15078 307 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 TMEM31Q5JXX7 168 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 OR13C3Q8NGS6 347 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 COQ8AQ8NI60 647 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 SPRYD4Q8WW59 207 aaPredicted RBP3.07□□□□□ -1.92
VPS13C-203ENST00000395896 TCFL5Q9UL49 500 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 GCN1Q92616 2671 aaKnown RBP3.07□□□□□ -1.92
VPS13C-203ENST00000395896 HCFC1P51610 2035 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 PRAMEF27A3QJZ7 478 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 J3KTA2 159 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 HSPA12AO43301 675 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 HTR2CP28335 458 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 LAP3P28838 519 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 ARR3P36575 388 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 RPS23P62266 143 aaKnown RBP3.07□□□□□ -1.92
VPS13C-203ENST00000395896 MC2RQ01718 297 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 NUFIP2Q7Z417 695 aaKnown RBP3.07□□□□□ -1.92
VPS13C-203ENST00000395896 KIF18BQ86Y91 864 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 SDR9C7Q8NEX9 313 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 OR6F1Q8NGZ6 308 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 OR52N5Q8NH56 324 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 ABHD4Q8TB40 342 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 MIB2Q96AX9 1013 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 WDFY2Q96P53 400 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 TMEM59Q9BXS4 323 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 FAIMQ9NVQ4 179 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 ASH2LQ9UBL3 628 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 NUBP2Q9Y5Y2 271 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 KIR2DS1A0A191URI9 304 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 WNT11O96014 354 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 ACTL6AO96019 429 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 IGHA1P01876 353 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 CTXN2P0C2S0 81 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 SFTPCP11686 197 aa3.07□□□□□ -1.92
VPS13C-203ENST00000395896 ACHEP22303 614 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms