RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 HACD2Q6Y1H2 254 aa13.83□□□□□ -0.2
CXCL12-206ENST00000395795 IGFN1Q86VF2 1251 aa13.83□□□□□ -0.2
CXCL12-206ENST00000395795 LRRC18Q8N456 261 aa13.83□□□□□ -0.2
CXCL12-206ENST00000395795 RBM15BQ8NDT2 890 aaKnown RBP13.83□□□□□ -0.2
CXCL12-206ENST00000395795 HPS1Q92902 700 aa13.83□□□□□ -0.2
CXCL12-206ENST00000395795 POM121L2Q96KW2 1035 aa13.83□□□□□ -0.2
CXCL12-206ENST00000395795 SNX18Q96RF0 628 aa13.83□□□□□ -0.2
CXCL12-206ENST00000395795 BEX2Q9BXY8 128 aa13.83□□□□□ -0.2
CXCL12-206ENST00000395795 MS4A5Q9H3V2 200 aa13.83□□□□□ -0.2
CXCL12-206ENST00000395795 CHODLQ9H9P2 273 aa13.83□□□□□ -0.2
CXCL12-206ENST00000395795 ABCD2Q9UBJ2 740 aa13.83□□□□□ -0.2
CXCL12-206ENST00000395795 LPAR3Q9UBY5 353 aa13.83□□□□□ -0.2
CXCL12-206ENST00000395795 ZNF346Q9UL40 294 aaKnown RBP13.83□□□□□ -0.2
CXCL12-206ENST00000395795 KCNS2Q9ULS6 477 aa13.83□□□□□ -0.2
CXCL12-206ENST00000395795 SPEF1Q9Y4P9 236 aa13.83□□□□□ -0.2
CXCL12-206ENST00000395795 TRAV27A0A087WT01 109 aa13.82□□□□□ -0.2
CXCL12-206ENST00000395795 MCIDASD6RGH6 385 aa13.82□□□□□ -0.2
CXCL12-206ENST00000395795 FARS2O95363 451 aaKnown RBP13.82□□□□□ -0.2
CXCL12-206ENST00000395795 IFNA2P01563 188 aa13.82□□□□□ -0.2
CXCL12-206ENST00000395795 ZNF32P17041 273 aa13.82□□□□□ -0.2
CXCL12-206ENST00000395795 MAGEB1P43366 347 aa13.82□□□□□ -0.2
CXCL12-206ENST00000395795 CDH15P55291 814 aa13.82□□□□□ -0.2
CXCL12-206ENST00000395795 UCP2P55851 309 aa13.82□□□□□ -0.2
CXCL12-206ENST00000395795 RPL27P61353 136 aaKnown RBP13.82□□□□□ -0.2
CXCL12-206ENST00000395795 RPS23P62266 143 aaKnown RBP13.82□□□□□ -0.2
CXCL12-206ENST00000395795 PSG4Q00888 419 aa13.82□□□□□ -0.2
CXCL12-206ENST00000395795 GALK2Q01415 458 aa13.82□□□□□ -0.2
CXCL12-206ENST00000395795 KRTAP24-1Q3LI83 254 aa13.82□□□□□ -0.2
CXCL12-206ENST00000395795 SLC36A2Q495M3 483 aa13.82□□□□□ -0.2
CXCL12-206ENST00000395795 PABPC1L2AQ5JQF8 200 aa13.82□□□□□ -0.2
CXCL12-206ENST00000395795 GKAP1Q5VSY0 366 aaPredicted RBP13.82□□□□□ -0.2
CXCL12-206ENST00000395795 FAM27BQ5VT28 67 aa13.82□□□□□ -0.2
CXCL12-206ENST00000395795 RGS7BPQ6MZT1 257 aaPredicted RBP13.82□□□□□ -0.2
CXCL12-206ENST00000395795 TMEM53Q6P2H8 277 aa13.82□□□□□ -0.2
CXCL12-206ENST00000395795 ARPINQ7Z6K5 226 aa13.82□□□□□ -0.2
CXCL12-206ENST00000395795 ZNF101Q8IZC7 436 aa13.82□□□□□ -0.2
CXCL12-206ENST00000395795 FAM156AQ8NDB6 213 aa13.82□□□□□ -0.2
CXCL12-206ENST00000395795 OR13C2Q8NGS9 318 aa13.82□□□□□ -0.2
CXCL12-206ENST00000395795 ALG12Q9BV10 488 aa13.82□□□□□ -0.2
CXCL12-206ENST00000395795 SHARPINQ9H0F6 387 aa13.82□□□□□ -0.2
CXCL12-206ENST00000395795 WNT5BQ9H1J7 359 aa13.82□□□□□ -0.2
CXCL12-206ENST00000395795 DUSP13Q9UII6 198 aa13.82□□□□□ -0.2
CXCL12-206ENST00000395795 HTR3EA5X5Y0 456 aa13.81□□□□□ -0.2
CXCL12-206ENST00000395795 RNF212BA8MTL3 300 aa13.81□□□□□ -0.2
CXCL12-206ENST00000395795 ENTPD5O75356 428 aa13.81□□□□□ -0.2
CXCL12-206ENST00000395795 ZNF84P51523 738 aa13.81□□□□□ -0.2
CXCL12-206ENST00000395795 CHN2P52757 468 aa13.81□□□□□ -0.2
CXCL12-206ENST00000395795 CTXN1P60606 82 aa13.81□□□□□ -0.2
CXCL12-206ENST00000395795 MRPS11P82912 194 aaKnown RBP13.81□□□□□ -0.2
CXCL12-206ENST00000395795 SRSF2Q01130 221 aaKnown RBP13.81□□□□□ -0.2
CXCL12-206ENST00000395795 TOP3AQ13472 1001 aaPredicted RBP13.81□□□□□ -0.2
CXCL12-206ENST00000395795 ENDOGQ14249 297 aaKnown RBP13.81□□□□□ -0.2
CXCL12-206ENST00000395795 TAF11Q15544 211 aa13.81□□□□□ -0.2
CXCL12-206ENST00000395795 CR1LQ2VPA4 569 aa13.81□□□□□ -0.2
CXCL12-206ENST00000395795 ALKBH6Q3KRA9 238 aa13.81□□□□□ -0.2
CXCL12-206ENST00000395795 HDDC2Q7Z4H3 204 aa13.81□□□□□ -0.2
CXCL12-206ENST00000395795 OR51A7Q8NH64 312 aa13.81□□□□□ -0.2
CXCL12-206ENST00000395795 NSMAFQ92636 917 aa13.81□□□□□ -0.2
CXCL12-206ENST00000395795 RDH5Q92781 318 aa13.81□□□□□ -0.2
CXCL12-206ENST00000395795 HSH2DQ96JZ2 352 aa13.81□□□□□ -0.2
CXCL12-206ENST00000395795 OR51B6Q9H340 312 aa13.81□□□□□ -0.2
CXCL12-206ENST00000395795 C1orf198Q9H425 327 aa13.81□□□□□ -0.2
CXCL12-206ENST00000395795 RNF121Q9H920 327 aa13.81□□□□□ -0.2
CXCL12-206ENST00000395795 ZNF275Q9NSD4 429 aaPredicted RBP13.81□□□□□ -0.2
CXCL12-206ENST00000395795 TAAR3PQ9P1P4 343 aa13.81□□□□□ -0.2
CXCL12-206ENST00000395795 AP3M1Q9Y2T2 418 aa13.81□□□□□ -0.2
CXCL12-206ENST00000395795 C17orf100A8MU93 164 aa13.8□□□□□ -0.2
CXCL12-206ENST00000395795 ICMTO60725 284 aa13.8□□□□□ -0.2
CXCL12-206ENST00000395795 SERPINA1P01009 418 aa13.8□□□□□ -0.2
CXCL12-206ENST00000395795 IFNW1P05000 195 aa13.8□□□□□ -0.2
CXCL12-206ENST00000395795 ERCC1P07992 297 aaPredicted RBP13.8□□□□□ -0.2
CXCL12-206ENST00000395795 NCK1P16333 377 aa13.8□□□□□ -0.2
CXCL12-206ENST00000395795 ACHEP22303 614 aa13.8□□□□□ -0.2
CXCL12-206ENST00000395795 MPV17P39210 176 aa13.8□□□□□ -0.2
CXCL12-206ENST00000395795 LIMS1P48059 325 aa13.8□□□□□ -0.2
CXCL12-206ENST00000395795 FXYD6P3P58550 94 aa13.8□□□□□ -0.2
CXCL12-206ENST00000395795 TRAM2Q15035 370 aa13.8□□□□□ -0.2
CXCL12-206ENST00000395795 IFI44LQ53G44 452 aa13.8□□□□□ -0.2
CXCL12-206ENST00000395795 TMPRSS11FQ6ZWK6 438 aa13.8□□□□□ -0.2
CXCL12-206ENST00000395795 MBOAT2Q6ZWT7 520 aa13.8□□□□□ -0.2
CXCL12-206ENST00000395795 FAM122BQ7Z309 247 aa13.8□□□□□ -0.2
CXCL12-206ENST00000395795 FAM86B1Q8N7N1 296 aa13.8□□□□□ -0.2
CXCL12-206ENST00000395795 AKR7LQ8NHP1 331 aa13.8□□□□□ -0.2
CXCL12-206ENST00000395795 CLDND2Q8NHS1 167 aa13.8□□□□□ -0.2
CXCL12-206ENST00000395795 SLC7A13Q8TCU3 470 aa13.8□□□□□ -0.2
CXCL12-206ENST00000395795 GEMIN6Q8WXD5 167 aaKnown RBP13.8□□□□□ -0.2
CXCL12-206ENST00000395795 ACOT11Q8WXI4 607 aaPredicted RBP13.8□□□□□ -0.2
CXCL12-206ENST00000395795 MARS2Q96GW9 593 aaKnown RBP13.8□□□□□ -0.2
CXCL12-206ENST00000395795 C7orf34Q96L11 122 aa13.8□□□□□ -0.2
CXCL12-206ENST00000395795 HOPXQ9BPY8 73 aaPredicted RBP13.8□□□□□ -0.2
CXCL12-206ENST00000395795 FUZQ9BT04 418 aa13.8□□□□□ -0.2
CXCL12-206ENST00000395795 ZNF416Q9BWM5 594 aa13.8□□□□□ -0.2
CXCL12-206ENST00000395795 CDH20Q9HBT6 801 aa13.8□□□□□ -0.2
CXCL12-206ENST00000395795 STX18Q9P2W9 335 aaKnown RBP13.8□□□□□ -0.2
CXCL12-206ENST00000395795 ADAM18Q9Y3Q7 739 aa13.8□□□□□ -0.2
CXCL12-206ENST00000395795 FBN3Q75N90 2809 aa13.8□□□□□ -0.2
CXCL12-206ENST00000395795 SLC22A23A1A5C7 686 aa13.79□□□□□ -0.2
CXCL12-206ENST00000395795 FAM157AC9JC47 383 aa13.79□□□□□ -0.2
CXCL12-206ENST00000395795 PTP4A3O75365 173 aa13.79□□□□□ -0.2
CXCL12-206ENST00000395795 IGHV3-13P01766 116 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms