RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 FN3KQ9H479 309 aa17.33■□□□□ 0.36
SNCA-203ENST00000394986 CRNNQ9UBG3 495 aaPredicted RBP17.33■□□□□ 0.36
SNCA-203ENST00000394986 REV1Q9UBZ9 1251 aa17.33■□□□□ 0.36
SNCA-203ENST00000394986 AKAP6Q13023 2319 aa17.33■□□□□ 0.36
SNCA-203ENST00000394986 ATP6V1G2-DDX39BF2Z307 99 aa17.32■□□□□ 0.36
SNCA-203ENST00000394986 H3BNX3 289 aa17.32■□□□□ 0.36
SNCA-203ENST00000394986 SLC16A7O60669 478 aa17.32■□□□□ 0.36
SNCA-203ENST00000394986 FARS2O95363 451 aaKnown RBP17.32■□□□□ 0.36
SNCA-203ENST00000394986 IGKV3-15P01624 115 aa17.32■□□□□ 0.36
SNCA-203ENST00000394986 IGLV1-44P01699 117 aa17.32■□□□□ 0.36
SNCA-203ENST00000394986 SCG5P05408 212 aa17.32■□□□□ 0.36
SNCA-203ENST00000394986 FCGR1AP12314 374 aa17.32■□□□□ 0.36
SNCA-203ENST00000394986 MRPS34P82930 218 aaKnown RBP17.32■□□□□ 0.36
SNCA-203ENST00000394986 C1QTNF12Q5T7M4 302 aa17.32■□□□□ 0.36
SNCA-203ENST00000394986 SLC22A25Q6T423 547 aa17.32■□□□□ 0.36
SNCA-203ENST00000394986 PAMR1Q6UXH9 720 aa17.32■□□□□ 0.36
SNCA-203ENST00000394986 SLC16A14Q7RTX9 510 aa17.32■□□□□ 0.36
SNCA-203ENST00000394986 IQCF1Q8N6M8 205 aa17.32■□□□□ 0.36
SNCA-203ENST00000394986 ATG16L2Q8NAA4 619 aa17.32■□□□□ 0.36
SNCA-203ENST00000394986 MS4A3Q96HJ5 214 aa17.32■□□□□ 0.36
SNCA-203ENST00000394986 MOKQ9UQ07 419 aa17.32■□□□□ 0.36
SNCA-203ENST00000394986 H3BN98 237 aa17.31■□□□□ 0.36
SNCA-203ENST00000394986 DCTN6O00399 190 aa17.31■□□□□ 0.36
SNCA-203ENST00000394986 ENTPD5O75356 428 aa17.31■□□□□ 0.36
SNCA-203ENST00000394986 UBL3O95164 117 aa17.31■□□□□ 0.36
SNCA-203ENST00000394986 CALCRP30988 508 aa17.31■□□□□ 0.36
SNCA-203ENST00000394986 ARHGDIAP52565 204 aa17.31■□□□□ 0.36
SNCA-203ENST00000394986 CDH11P55287 796 aa17.31■□□□□ 0.36
SNCA-203ENST00000394986 RAB1AP62820 205 aa17.31■□□□□ 0.36
SNCA-203ENST00000394986 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.31■□□□□ 0.36
SNCA-203ENST00000394986 COX10Q12887 443 aa17.31■□□□□ 0.36
SNCA-203ENST00000394986 ZSCAN26Q16670 478 aa17.31■□□□□ 0.36
SNCA-203ENST00000394986 ZNF672Q499Z4 452 aaPredicted RBP17.31■□□□□ 0.36
SNCA-203ENST00000394986 B3GLCTQ6Y288 498 aa17.31■□□□□ 0.36
SNCA-203ENST00000394986 FOXL2NBQ6ZUU3 175 aa17.31■□□□□ 0.36
SNCA-203ENST00000394986 OR52E2Q8NGJ4 325 aa17.31■□□□□ 0.36
SNCA-203ENST00000394986 RADILQ96JH8 1075 aa17.31■□□□□ 0.36
SNCA-203ENST00000394986 ZNF75AQ96N20 296 aa17.31■□□□□ 0.36
SNCA-203ENST00000394986 BDH2Q9BUT1 245 aa17.31■□□□□ 0.36
SNCA-203ENST00000394986 SIAEQ9HAT2 523 aa17.31■□□□□ 0.36
SNCA-203ENST00000394986 KIF17Q9P2E2 1029 aa17.31■□□□□ 0.36
SNCA-203ENST00000394986 ST6GALNAC2Q9UJ37 374 aa17.31■□□□□ 0.36
SNCA-203ENST00000394986 NAV2Q8IVL1 2488 aa17.31■□□□□ 0.36
SNCA-203ENST00000394986 ROS1P08922 2347 aa17.31■□□□□ 0.36
SNCA-203ENST00000394986 OR6C68A6NDL8 312 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 ANKRD65E5RJM6 399 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 HS3ST1O14792 307 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 AHCYL1O43865 530 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 RAB36O95755 333 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 GPANK1O95872 356 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 ANXA8P13928 327 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 ZNF23P17027 643 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 POU1F1P28069 291 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 LAP3P28838 519 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 ARR3P36575 388 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 DAPP51397 102 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 RAB39AQ14964 217 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 NRN1LQ496H8 165 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 UGT2A3Q6UWM9 527 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 LNX2Q8N448 690 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 FAM169BQ8N8A8 192 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 CYB561A3Q8NBI2 242 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 OR2T33Q8NG76 320 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 TEX47Q8TBZ9 253 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 NRBF2Q96F24 287 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 PKP2Q99959 881 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 ZNF556Q9HAH1 456 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 EMC7Q9NPA0 242 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 RPRD1BQ9NQG5 326 aaKnown RBP17.3■□□□□ 0.36
SNCA-203ENST00000394986 COA3Q9Y2R0 106 aaPredicted RBP17.3■□□□□ 0.36
SNCA-203ENST00000394986 CADP27708 2225 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 SAC3D1A6NKF1 404 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 IDH3BO43837 385 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 MPZL1O95297 269 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 RENP00797 406 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 ZNF14P17017 642 aaPredicted RBP17.3■□□□□ 0.36
SNCA-203ENST00000394986 NPR2P20594 1047 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 NAAAQ02083 359 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 PGGHGQ32M88 737 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 FAHD1Q6P587 224 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 HIPK1Q86Z02 1210 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 NPEPL1Q8NDH3 523 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 FBXO17Q96EF6 278 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 RNF121Q9H920 327 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 SRA1Q9HD15 236 aaKnown RBP17.3■□□□□ 0.36
SNCA-203ENST00000394986 POLE4Q9NR33 117 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 POU2F3Q9UKI9 436 aa17.3■□□□□ 0.36
SNCA-203ENST00000394986 G3V2T6 193 aa17.29■□□□□ 0.36
SNCA-203ENST00000394986 KHDRBS3O75525 346 aaKnown RBP17.29■□□□□ 0.36
SNCA-203ENST00000394986 ATE1O95260 518 aa17.29■□□□□ 0.36
SNCA-203ENST00000394986 RAF1P04049 648 aa17.29■□□□□ 0.36
SNCA-203ENST00000394986 MMP7P09237 267 aaPredicted RBP17.29■□□□□ 0.36
SNCA-203ENST00000394986 OSMP13725 252 aa17.29■□□□□ 0.36
SNCA-203ENST00000394986 KEAP1Q14145 624 aa17.29■□□□□ 0.36
SNCA-203ENST00000394986 ENDOGQ14249 297 aaKnown RBP17.29■□□□□ 0.36
SNCA-203ENST00000394986 C3orf36Q3SXR2 165 aa17.29■□□□□ 0.36
SNCA-203ENST00000394986 SLC36A2Q495M3 483 aa17.29■□□□□ 0.36
SNCA-203ENST00000394986 ZNF362Q5T0B9 420 aaPredicted RBP17.29■□□□□ 0.36
SNCA-203ENST00000394986 ZNF584Q8IVC4 421 aa17.29■□□□□ 0.36
SNCA-203ENST00000394986 OR6V1Q8N148 313 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms