RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 LINC00862A6NCI5 91 aa12.15□□□□□ -0.47
GTF2F1-201ENST00000394456 SLC16A7O60669 478 aa12.15□□□□□ -0.47
GTF2F1-201ENST00000394456 TACSTD2P09758 323 aa12.15□□□□□ -0.47
GTF2F1-201ENST00000394456 GLB1P16278 677 aa12.15□□□□□ -0.47
GTF2F1-201ENST00000394456 HOXD11P31277 338 aaPredicted RBP12.15□□□□□ -0.47
GTF2F1-201ENST00000394456 PPICP45877 212 aa12.15□□□□□ -0.47
GTF2F1-201ENST00000394456 DHPSP49366 369 aaPredicted RBP12.15□□□□□ -0.47
GTF2F1-201ENST00000394456 ACKR1Q16570 336 aa12.15□□□□□ -0.47
GTF2F1-201ENST00000394456 WDR45BQ5MNZ6 344 aa12.15□□□□□ -0.47
GTF2F1-201ENST00000394456 FAM69AQ5T7M9 428 aa12.15□□□□□ -0.47
GTF2F1-201ENST00000394456 B3GNTL1Q67FW5 361 aaPredicted RBP12.15□□□□□ -0.47
GTF2F1-201ENST00000394456 SLC6A19Q695T7 634 aa12.15□□□□□ -0.47
GTF2F1-201ENST00000394456 LANCL3Q6ZV70 420 aa12.15□□□□□ -0.47
GTF2F1-201ENST00000394456 STK35Q8TDR2 534 aa12.15□□□□□ -0.47
GTF2F1-201ENST00000394456 PTDSS2Q9BVG9 487 aa12.15□□□□□ -0.47
GTF2F1-201ENST00000394456 PRODH2Q9UF12 536 aa12.15□□□□□ -0.47
GTF2F1-201ENST00000394456 CGGBP1Q9UFW8 167 aaPredicted RBP12.15□□□□□ -0.47
GTF2F1-201ENST00000394456 FBXL3Q9UKT7 428 aa12.15□□□□□ -0.47
GTF2F1-201ENST00000394456 ADAMTS9Q9P2N4 1935 aa12.15□□□□□ -0.47
GTF2F1-201ENST00000394456 A0A1B0GUH1 482 aa12.14□□□□□ -0.47
GTF2F1-201ENST00000394456 TGM6O95932 706 aa12.14□□□□□ -0.47
GTF2F1-201ENST00000394456 POU3F4P49335 361 aa12.14□□□□□ -0.47
GTF2F1-201ENST00000394456 RAG2P55895 527 aa12.14□□□□□ -0.47
GTF2F1-201ENST00000394456 H2BFSP57053 126 aa12.14□□□□□ -0.47
GTF2F1-201ENST00000394456 PSMA6P60900 246 aaKnown RBP12.14□□□□□ -0.47
GTF2F1-201ENST00000394456 SERTAD2Q14140 314 aa12.14□□□□□ -0.47
GTF2F1-201ENST00000394456 SHBQ15464 509 aa12.14□□□□□ -0.47
GTF2F1-201ENST00000394456 COL28A1Q2UY09 1125 aa12.14□□□□□ -0.47
GTF2F1-201ENST00000394456 SDR16C5Q8N3Y7 309 aa12.14□□□□□ -0.47
GTF2F1-201ENST00000394456 OR51A2Q8NGJ7 313 aa12.14□□□□□ -0.47
GTF2F1-201ENST00000394456 LCORQ96JN0 433 aaPredicted RBP12.14□□□□□ -0.47
GTF2F1-201ENST00000394456 KLHL15Q96M94 604 aa12.14□□□□□ -0.47
GTF2F1-201ENST00000394456 ADAM19Q9H013 955 aa12.14□□□□□ -0.47
GTF2F1-201ENST00000394456 ATXN7L1Q9ULK2 861 aaPredicted RBP12.14□□□□□ -0.47
GTF2F1-201ENST00000394456 B9D1Q9UPM9 204 aa12.14□□□□□ -0.47
GTF2F1-201ENST00000394456 ADAMTS20P59510 1910 aa12.14□□□□□ -0.47
GTF2F1-201ENST00000394456 ZNF254O75437 659 aa12.14□□□□□ -0.47
GTF2F1-201ENST00000394456 CTAG2O75638 210 aa12.14□□□□□ -0.47
GTF2F1-201ENST00000394456 IGKV3-11P04433 115 aa12.14□□□□□ -0.47
GTF2F1-201ENST00000394456 RLN1P04808 185 aa12.14□□□□□ -0.47
GTF2F1-201ENST00000394456 HIST1H2ABP04908 130 aa12.14□□□□□ -0.47
GTF2F1-201ENST00000394456 CALCBP10092 127 aa12.14□□□□□ -0.47
GTF2F1-201ENST00000394456 OLFML2AQ68BL7 652 aa12.14□□□□□ -0.47
GTF2F1-201ENST00000394456 HIST3H2AQ7L7L0 130 aa12.14□□□□□ -0.47
GTF2F1-201ENST00000394456 SUN5Q8TC36 379 aa12.14□□□□□ -0.47
GTF2F1-201ENST00000394456 THAP3Q8WTV1 239 aaPredicted RBP12.14□□□□□ -0.47
GTF2F1-201ENST00000394456 HIST1H2ACQ93077 130 aa12.14□□□□□ -0.47
GTF2F1-201ENST00000394456 ACTR6Q9GZN1 396 aa12.14□□□□□ -0.47
GTF2F1-201ENST00000394456 EVA1AQ9H8M9 152 aa12.14□□□□□ -0.47
GTF2F1-201ENST00000394456 MRPL39Q9NYK5 338 aaKnown RBP12.14□□□□□ -0.47
GTF2F1-201ENST00000394456 SHISA8B8ZZ34 492 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 NDUFB6O95139 128 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 TXNDC12O95881 172 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 CXCR1P25024 350 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 FMODQ06828 376 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 C2orf76Q3KRA6 126 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 METTL11BQ5VVY1 283 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 TMPRSS9Q7Z410 1059 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 MEIOBQ8N635 442 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 OR51S1Q8NGJ8 323 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 OTOSQ8NHW6 89 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 LIPHQ8WWY8 451 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 PHYHIPQ92561 330 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 SFXN2Q96NB2 322 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 GUCD1Q96NT3 240 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 GINS4Q9BRT9 223 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 CHRNA10Q9GZZ6 450 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 SLITRK2Q9H156 845 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 HRH3Q9Y5N1 445 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 NUP210LQ5VU65 1888 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 M0R233 179 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 ACOT7O00154 380 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 ZNF354AO60765 605 aaPredicted RBP12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 RENP00797 406 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 PDGFAP04085 211 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 CD3DP04234 171 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 OPCMLQ14982 345 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 SMUG1Q53HV7 270 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 ELFN2Q5R3F8 820 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 RTN4RL2Q86UN3 420 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 ZNF440Q8IYI8 595 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 D2HGDHQ8N465 521 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 PMEPA1Q969W9 287 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 MRPL48Q96GC5 212 aaKnown RBP12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 ZNF578Q96N58 590 aaPredicted RBP12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 DMRTA2Q96SC8 542 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 DPYSL5Q9BPU6 564 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 FGF21Q9NSA1 209 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 STEAP1Q9UHE8 339 aa12.13□□□□□ -0.47
GTF2F1-201ENST00000394456 GGT3PA6NGU5 568 aa12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 ECDO95905 644 aaPredicted RBP12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 PDGFBP01127 241 aaPredicted RBP12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 RAB40ALP0C0E4 278 aa12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 FBLP22087 321 aaKnown RBP12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 RORAP35398 523 aa12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 EBPQ15125 230 aaKnown RBP12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 ARHGAP40Q5TG30 622 aa12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 LINC00346Q8IVM7 164 aa12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 GPR148Q8TDV2 347 aa12.12□□□□□ -0.47
GTF2F1-201ENST00000394456 METTL21AQ8WXB1 218 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms