RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 OTX2P32243 289 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 RPL29P47914 159 aaKnown RBP12.43□□□□□ -0.42
USP49-203ENST00000394253 ECM1Q16610 540 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 MMP21Q8N119 569 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 OR2AE1Q8NHA4 323 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 SLC25A46Q96AG3 418 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 PAX5Q02548 391 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 HLXQ14774 488 aaPredicted RBP12.43□□□□□ -0.42
USP49-203ENST00000394253 RPS27LQ71UM5 84 aaKnown RBP12.43□□□□□ -0.42
USP49-203ENST00000394253 FAM131CQ96AQ9 280 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 PTPRUQ92729 1446 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 CCDC187A0A096LP49 1063 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 KLRG2A4D1S0 409 aaPredicted RBP12.43□□□□□ -0.42
USP49-203ENST00000394253 PIRO00625 290 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 CR2P20023 1033 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 MMP11P24347 488 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 PODNL1Q6PEZ8 512 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 PIWIL3Q7Z3Z3 882 aaKnown RBP12.43□□□□□ -0.42
USP49-203ENST00000394253 PEX11GQ96HA9 241 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 PECRQ9BY49 303 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 LMTK2Q8IWU2 1503 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 A6NIN4 97 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 ZNF354AO60765 605 aaPredicted RBP12.43□□□□□ -0.42
USP49-203ENST00000394253 ATP1B1P05026 303 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 PSMB6P28072 239 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 PGGHGQ32M88 737 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 FRMPD2BQ6IN97 320 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 GDPD3Q7L5L3 318 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 LRRC18Q8N456 261 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 OR5D13Q8NGL4 314 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 TAS2R5Q9NYW4 299 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 HTR5AP47898 357 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 SHC2P98077 582 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 LETMD1Q6P1Q0 360 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 VRK3Q8IV63 474 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 OR5V1Q9UGF6 321 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 NPY4RP50391 375 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 C6orf201Q7Z4U5 140 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 ARHGAP23Q9P227 1491 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 SNNO75324 88 aaPredicted RBP12.42□□□□□ -0.42
USP49-203ENST00000394253 IL1R2P27930 398 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 AKR1C3P42330 323 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 MSS51Q4VC12 460 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 ZNF813Q6ZN06 617 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 SLC22A12Q96S37 553 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 SALL4Q9UJQ4 1053 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 UBR2Q8IWV8 1755 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 KDM4EB2RXH2 506 aaPredicted RBP12.42□□□□□ -0.42
USP49-203ENST00000394253 G3V3Y1 287 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 GALR2O43603 387 aaPredicted RBP12.42□□□□□ -0.42
USP49-203ENST00000394253 GLAP06280 429 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 EN2P19622 333 aaPredicted RBP12.42□□□□□ -0.42
USP49-203ENST00000394253 GCAP28676 217 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 C21orf33P30042 268 aaPredicted RBP12.42□□□□□ -0.42
USP49-203ENST00000394253 SIRPAP78324 504 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 CPZQ66K79 652 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 WDR92Q96MX6 357 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 NCR1O76036 304 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 YIF1AO95070 293 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 ADPRMQ3LIE5 342 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 PRAMEF19Q5SWL8 479 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 EID2BQ96D98 161 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 NOX4Q9NPH5 578 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 BOKQ9UMX3 212 aaPredicted RBP12.42□□□□□ -0.42
USP49-203ENST00000394253 QDPRP09417 244 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 MS4A2Q01362 244 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 FAM163AQ96GL9 167 aaPredicted RBP12.42□□□□□ -0.42
USP49-203ENST00000394253 MRPS28Q9Y2Q9 187 aaKnown RBP12.42□□□□□ -0.42
USP49-203ENST00000394253 CCR6P51684 374 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 OR7E24Q6IFN5 339 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 GDF6Q6KF10 455 aaPredicted RBP12.42□□□□□ -0.42
USP49-203ENST00000394253 GATA6Q92908 595 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 TCTN2Q96GX1 697 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 NPAS1Q99742 590 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 NXF2Q9GZY0 626 aaKnown RBP12.42□□□□□ -0.42
USP49-203ENST00000394253 ZNF552Q9H707 407 aaPredicted RBP12.42□□□□□ -0.42
USP49-203ENST00000394253 TIMM9Q9Y5J7 89 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 A0A1B0GVG6 124 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 NUDT3O95989 172 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 CSF3P09919 207 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 IRF7Q92985 503 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 SNX11Q9Y5W9 270 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 NME4O00746 187 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 OTUD1Q5VV17 481 aaPredicted RBP12.42□□□□□ -0.42
USP49-203ENST00000394253 HMGN2P46Q86SG4 172 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 OR10D4PQ8NGN7 298 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 DUS3LQ96G46 650 aaKnown RBP12.42□□□□□ -0.42
USP49-203ENST00000394253 AMDHD2Q9Y303 409 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 EMC9Q9Y3B6 208 aa12.42□□□□□ -0.42
USP49-203ENST00000394253 SRSF9Q13242 221 aaKnown RBP eCLIP12.41□□□□□ -0.42
USP49-203ENST00000394253 OR52R1Q8NGF1 315 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 FAM3DQ96BQ1 224 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 NSUN5Q96P11 429 aaKnown RBP12.41□□□□□ -0.42
USP49-203ENST00000394253 OR8B4Q96RC9 309 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 DDOQ99489 341 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 CA14Q9ULX7 337 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 KCNQ2O43526 872 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 LTC4SQ16873 150 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 OR10P1Q8NGE3 313 aa12.41□□□□□ -0.42
USP49-203ENST00000394253 DTD1Q8TEA8 209 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms