RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 OR6N1Q8NGY5 312 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 GHSRQ92847 366 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 SCMH1Q96GD3 660 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 ZNF385AQ96PM9 386 aaKnown RBP7.69□□□□□ -1.18
TDP1-203ENST00000393454 TTYH2Q9BSA4 534 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 SCNM1Q9BWG6 230 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 C6orf62Q9GZU0 229 aaPredicted RBP7.69□□□□□ -1.18
TDP1-203ENST00000393454 MRM2Q9UI43 246 aaKnown RBP7.69□□□□□ -1.18
TDP1-203ENST00000393454 ST6GALNAC2Q9UJ37 374 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 KCNMB2Q9Y691 235 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 PMF1-BGLAPU3KQ54 211 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 CACNA1CQ13936 2221 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 OGG1O15527 345 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 EFSO43281 561 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 TMCC2O75069 709 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 ITGB2P05107 769 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 QDPRP09417 244 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 PSKH1P11801 424 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 SDHBP21912 280 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 PTGS2P35354 604 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 CSNK1A1P48729 337 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 SLC17A1Q14916 467 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 CDK5R1Q15078 307 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 POU4F3Q15319 338 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 TRAM1Q15629 374 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 MOGQ16653 247 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 ZNF404Q494X3 552 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 DMKNQ6E0U4 476 aaPredicted RBP7.69□□□□□ -1.18
TDP1-203ENST00000393454 LRRN1Q6UXK5 716 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 KRT77Q7Z794 578 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 LINC00346Q8IVM7 164 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 MEIOBQ8N635 442 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 ZFP62Q8NB50 900 aaPredicted RBP7.69□□□□□ -1.18
TDP1-203ENST00000393454 SLC26A10Q8NG04 563 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 ABHD4Q8TB40 342 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 ZFAND2BQ8WV99 257 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 ASB17Q8WXJ9 295 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 ABTB1Q969K4 478 aaPredicted RBP7.69□□□□□ -1.18
TDP1-203ENST00000393454 MCHR2Q969V1 340 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 ZNF845Q96IR2 970 aaPredicted RBP7.69□□□□□ -1.18
TDP1-203ENST00000393454 ADGRG7Q96K78 797 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 DCLRE1CQ96SD1 692 aaKnown RBP7.69□□□□□ -1.18
TDP1-203ENST00000393454 AMELYQ99218 206 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 COQ7Q99807 217 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 SLIRPQ9GZT3 109 aaKnown RBP7.69□□□□□ -1.18
TDP1-203ENST00000393454 SLCO1C1Q9NYB5 712 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 CCDC59Q9P031 241 aaKnown RBP7.69□□□□□ -1.18
TDP1-203ENST00000393454 CELSR3Q9NYQ7 3312 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 SMIM30A4D0T7 59 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 CASKO14936 926 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 SULT1C4O75897 302 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 CLEC2LP0C7M8 214 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 CD53P19397 219 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 LAP3P28838 519 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 FGF9P31371 208 aaPredicted RBP7.68□□□□□ -1.18
TDP1-203ENST00000393454 SDC2P34741 201 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 LHX2P50458 406 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 RORCP51449 518 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 PMP22Q01453 160 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 ROR2Q01974 943 aaKnown RBP7.68□□□□□ -1.18
TDP1-203ENST00000393454 EGR3Q06889 387 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 DYNC1I2Q13409 638 aaKnown RBP7.68□□□□□ -1.18
TDP1-203ENST00000393454 HYAL4Q2M3T9 481 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 CCDC58Q4VC31 144 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 ZNF684Q5T5D7 378 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 LIPNQ5VXI9 398 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 KCTD18Q6PI47 426 aaPredicted RBP7.68□□□□□ -1.18
TDP1-203ENST00000393454 CD200R1LQ6Q8B3 271 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 TMEM91Q6ZNR0 172 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 TRILQ7L0X0 811 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 FCRLAQ7L513 359 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 CEACAM19Q7Z692 300 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 FAM109AQ8N4B1 249 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 ZNF454Q8N9F8 522 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 SNIP1Q8TAD8 396 aaKnown RBP7.68□□□□□ -1.18
TDP1-203ENST00000393454 FNDC8Q8TC99 324 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 C11orf40Q8WZ69 217 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 CPNE4Q96A23 557 aaPredicted RBP7.68□□□□□ -1.18
TDP1-203ENST00000393454 PNPLA2Q96AD5 504 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 SMIM19Q96E16 107 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 OR2M2Q96R28 347 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 KCNS3Q9BQ31 491 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 ABHD6Q9BV23 337 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 SF3B5Q9BWJ5 86 aaKnown RBP7.68□□□□□ -1.18
TDP1-203ENST00000393454 MROQ9BYG7 248 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 KCNN2Q9H2S1 579 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 MMP27Q9H306 513 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 ELOVL3Q9HB03 270 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 GLTPQ9NZD2 209 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 KLHL9Q9P2J3 617 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 POLR1DQ9Y2S0 133 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 ZNF407Q9C0G0 2248 aa7.68□□□□□ -1.18
TDP1-203ENST00000393454 SYNGR4O95473 234 aa7.67□□□□□ -1.18
TDP1-203ENST00000393454 SERPINA3P01011 423 aa7.67□□□□□ -1.18
TDP1-203ENST00000393454 IL1AP01583 271 aa7.67□□□□□ -1.18
TDP1-203ENST00000393454 GAAP10253 952 aa7.67□□□□□ -1.18
TDP1-203ENST00000393454 NR2C1P13056 603 aa7.67□□□□□ -1.18
TDP1-203ENST00000393454 CDAP32320 146 aa7.67□□□□□ -1.18
TDP1-203ENST00000393454 OPRL1P41146 370 aa7.67□□□□□ -1.18
TDP1-203ENST00000393454 GUCA1AP43080 201 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms