RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 CLECL1Q8IZS7 167 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 NDRG4Q9ULP0 352 aaKnown RBP13.63□□□□□ -0.23
CCDC50-201ENST00000392455 HSBP1O75506 76 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 APEX1P27695 318 aaKnown RBP13.63□□□□□ -0.23
CCDC50-201ENST00000392455 CTU2Q2VPK5 515 aaKnown RBP13.63□□□□□ -0.23
CCDC50-201ENST00000392455 COX19Q49B96 90 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 KHDC1LQ5JSQ8 128 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 FFAR4Q5NUL3 377 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 FAM57BQ71RH2 274 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 NETO1Q8TDF5 533 aa13.63□□□□□ -0.23
CCDC50-201ENST00000392455 ZNF727A8MUV8 499 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 ABHD16AO95870 558 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 GIPP09681 153 aaPredicted RBP13.62□□□□□ -0.23
CCDC50-201ENST00000392455 GABRB3P28472 473 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 HLXQ14774 488 aaPredicted RBP13.62□□□□□ -0.23
CCDC50-201ENST00000392455 IAH1Q2TAA2 248 aaPredicted RBP13.62□□□□□ -0.23
CCDC50-201ENST00000392455 PGGHGQ32M88 737 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 UMODL1-AS1Q8N2C9 162 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 SLC35A4Q96G79 324 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 ZNF443Q9Y2A4 671 aaPredicted RBP13.62□□□□□ -0.23
CCDC50-201ENST00000392455 TIMM9Q9Y5J7 89 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 NUPL2O15504 423 aaKnown RBP13.62□□□□□ -0.23
CCDC50-201ENST00000392455 TYROBPO43914 113 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 TNFRSF1BP20333 461 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 BLVRBP30043 206 aaPredicted RBP13.62□□□□□ -0.23
CCDC50-201ENST00000392455 OR8G2PQ6IF36 304 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 MFSD12Q6NUT3 480 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 ACOT7LQ6ZUV0 252 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 RPL3LQ92901 407 aaKnown RBP13.62□□□□□ -0.23
CCDC50-201ENST00000392455 PCYT2Q99447 389 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 C5AR2Q9P296 337 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 CYB5R1Q9UHQ9 305 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 TMEM238LA0A1B0GVL6 79 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 A6NJY4 79 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 NKX2-1P43699 371 aaPredicted RBP13.62□□□□□ -0.23
CCDC50-201ENST00000392455 PITX1P78337 314 aaPredicted RBP13.62□□□□□ -0.23
CCDC50-201ENST00000392455 AMMECR1LQ6DCA0 310 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 FKBP11Q9NYL4 201 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 SLCO3A1Q9UIG8 710 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 PIGLQ9Y2B2 252 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 GPR55Q9Y2T6 319 aaPredicted RBP13.62□□□□□ -0.23
CCDC50-201ENST00000392455 RAF1P04049 648 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 TMEM135Q86UB9 458 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 SDR9C7Q8NEX9 313 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 OR2J1Q9GZK6 312 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 MT-ATP6P00846 226 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 TCEAL1Q15170 157 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 SOWAHCQ53LP3 525 aaPredicted RBP13.62□□□□□ -0.23
CCDC50-201ENST00000392455 SLC39A5Q6ZMH5 540 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 FAM171A2A8MVW0 826 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 CD1EP15812 388 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 TMEM25Q86YD3 366 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 C11orf42Q8N5U0 333 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 INPP5KQ9BT40 448 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 CBLCQ9ULV8 474 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 NUP98P52948 1817 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 TMEM218A2RU14 115 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 SH2D1BO14796 132 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 ZNF264O43296 627 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 FDXRP22570 491 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 TVP23CQ96ET8 276 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 DDOQ99489 341 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 RCE1Q9Y256 329 aa13.62□□□□□ -0.23
CCDC50-201ENST00000392455 CSF3P09919 207 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 HOXC13P31276 330 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 TNFRSF4P43489 277 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 CPEB1Q9BZB8 566 aaKnown RBP13.61□□□□□ -0.23
CCDC50-201ENST00000392455 DCAF12Q5T6F0 453 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 FDX2Q6P4F2 183 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 FCRLAQ7L513 359 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 OR13D1Q8NGV5 346 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 FAM3CQ92520 227 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 RTL8AQ9BWD3 113 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 HES4Q9HCC6 221 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 STARD5Q9NSY2 213 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 PTAFRP25105 342 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 C21orf33P30042 268 aaPredicted RBP13.61□□□□□ -0.23
CCDC50-201ENST00000392455 SOX4Q06945 474 aaPredicted RBP13.61□□□□□ -0.23
CCDC50-201ENST00000392455 MFAP5Q13361 173 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 TAAR6Q96RI8 345 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 ADAMTS6Q9UKP5 1117 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 MRPS28Q9Y2Q9 187 aaKnown RBP13.61□□□□□ -0.23
CCDC50-201ENST00000392455 HNF1AP20823 631 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 NME2P22392 152 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 PTPRZ1P23471 2315 aaPredicted RBP13.61□□□□□ -0.23
CCDC50-201ENST00000392455 OR1D4P47884 311 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 JAG1P78504 1218 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 ZNF343Q6P1L6 599 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 LYPD4Q6UWN0 246 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 TUSC5Q8IXB3 177 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 TMEM217Q8N7C4 229 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 OR10P1Q8NGE3 313 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 OR1L1Q8NH94 360 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 G6PCP35575 357 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 ERVFC1P60507 584 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 HRASLS5Q96KN8 279 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 XYLT2Q9H1B5 865 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 SDR39U1Q9NRG7 319 aaPredicted RBP13.61□□□□□ -0.23
CCDC50-201ENST00000392455 KIF26BQ2KJY2 2108 aa13.61□□□□□ -0.23
CCDC50-201ENST00000392455 RAB9AP51151 201 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms