RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 A0A1W2PP64 1363 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 ERVK-7P63135 1459 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 GRIN2BQ13224 1484 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 BICRAQ9NZM4 1560 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 PIK3C2AO00443 1686 aa2.18□□□□□ -2.06
PTPRC-205ENST00000391970 NRCAMQ92823 1304 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 PCDH11XQ9BZA7 1347 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 ZNF532Q9HCE3 1301 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 ZNF318Q5VUA4 2279 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 ANKARQ7Z5J8 1434 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 NFAT5O94916 1531 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 ASXL1Q8IXJ9 1541 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 SCN4AP35499 1836 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 MYH6P13533 1939 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 TCHHQ07283 1943 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 A0A1B0GTQ1 180 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 A0A1B0GVL5 298 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 A0A1W2PQ67 120 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 OR6C74A6NCV1 312 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 A6NIZ1 184 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 OR52A4PA6NMU1 304 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 A8MU10 97 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 A8MXQ7 604 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 LOC110117498-PIK3R3F6TDL0 507 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 ZNF701M0R085 212 aaPredicted RBP2.17□□□□□ -2.06
PTPRC-205ENST00000391970 HSD17B6O14756 317 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 POLR1CO15160 346 aaPredicted RBP2.17□□□□□ -2.06
PTPRC-205ENST00000391970 ACOX3O15254 700 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 CLOCKO15516 846 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 EMC8O43402 210 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 MBTPS2O43462 519 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 CRTAPO75718 401 aaPredicted RBP2.17□□□□□ -2.06
PTPRC-205ENST00000391970 CBR3O75828 277 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 NPPAP01160 153 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 CBR1P16152 277 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 MX1P20591 662 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 ATP6V1B2P21281 511 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 GABRR1P24046 479 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 SPAM1P38567 509 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 OPRD1P41143 372 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 KIR2DS4P43632 304 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 GSSP48637 474 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 GDI2P50395 445 aaKnown RBP2.17□□□□□ -2.06
PTPRC-205ENST00000391970 AP2S1P53680 142 aaPredicted RBP2.17□□□□□ -2.06
PTPRC-205ENST00000391970 APOC4P55056 127 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 CDH6P55285 790 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 RAP1BP61224 184 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 VBP1P61758 197 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 GNB2P62879 340 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 RAD51Q06609 339 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 SPAG1Q07617 926 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 ZNF763Q0D2J5 394 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 BAMBIQ13145 260 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 ORC2Q13416 577 aaPredicted RBP2.17□□□□□ -2.06
PTPRC-205ENST00000391970 HERPUD1Q15011 391 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 OXA1LQ15070 435 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 NCF4Q15080 339 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 LIN52Q52LA3 116 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 SAMD4BQ5PRF9 694 aaKnown RBP2.17□□□□□ -2.06
PTPRC-205ENST00000391970 C1orf100Q5SVJ3 147 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 OTPQ5XKR4 325 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 CLEC6AQ6EIG7 209 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 OR2A2Q6IF42 318 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 NIPAL1Q6NVV3 410 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 UQCC3Q6UW78 93 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 ENPP6Q6UWR7 440 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 HSDL2Q6YN16 418 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 LINC00299Q6ZSB3 139 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 NIPA1Q7RTP0 329 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 C6orf223Q8N319 242 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 CSGALNACT2Q8N6G5 542 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 OR51S1Q8NGJ8 323 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 NEIL3Q8TAT5 605 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 TEX47Q8TBZ9 253 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 FANK1Q8TC84 345 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 CXorf40BQ96DE9 158 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 NUS1Q96E22 293 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 RMND5BQ96G75 393 aaPredicted RBP2.17□□□□□ -2.06
PTPRC-205ENST00000391970 IFT74Q96LB3 600 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 IMMP1LQ96LU5 166 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 OXGR1Q96P68 337 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 XPO6Q96QU8 1125 aaKnown RBP2.17□□□□□ -2.06
PTPRC-205ENST00000391970 MRPL45Q9BRJ2 306 aaKnown RBP2.17□□□□□ -2.06
PTPRC-205ENST00000391970 ROPN1BQ9BZX4 212 aaPredicted RBP2.17□□□□□ -2.06
PTPRC-205ENST00000391970 C20orf85Q9H1P6 137 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 TDRD3Q9H7E2 651 aaKnown RBP2.17□□□□□ -2.06
PTPRC-205ENST00000391970 NEK6Q9HC98 313 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 MRPS30Q9NP92 439 aaKnown RBP2.17□□□□□ -2.06
PTPRC-205ENST00000391970 THUMPD1Q9NXG2 353 aaKnown RBP2.17□□□□□ -2.06
PTPRC-205ENST00000391970 UVRAGQ9P2Y5 699 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 SEC14L3Q9UDX4 400 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 ZNF639Q9UID6 485 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 DNAJC12Q9UKB3 198 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 ERGIC3Q9Y282 383 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 STK38LQ9Y2H1 464 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 CDH10Q9Y6N8 788 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 A2MP01023 1474 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 CACNA1AO00555 2505 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 CHD4Q14839 1912 aa2.17□□□□□ -2.06
PTPRC-205ENST00000391970 KIF20BQ96Q89 1820 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms