RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 CDK20Q8IZL9 346 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 GALNT16Q8N428 558 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 ZNF614Q8N883 585 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 NUP43Q8NFH3 380 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 OR4E2Q8NGC2 313 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 OR52E2Q8NGJ4 325 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 SLAMF9Q96A28 289 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 RAB3CQ96E17 227 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 SAT2Q96F10 170 aaPredicted RBP13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 MARS2Q96GW9 593 aaKnown RBP13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 SMIM8Q96KF7 97 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 PRSS16Q9NQE7 514 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 SHPKQ9UHJ6 478 aa13.31□□□□□ -0.28
VPS9D1-201ENST00000389386 M0QYG6 137 aa13.3□□□□□ -0.28
VPS9D1-201ENST00000389386 PRICKLE3O43900 615 aaPredicted RBP13.3□□□□□ -0.28
VPS9D1-201ENST00000389386 ELFN1P0C7U0 828 aa13.3□□□□□ -0.28
VPS9D1-201ENST00000389386 C8orf89P0DMQ9 161 aa13.3□□□□□ -0.28
VPS9D1-201ENST00000389386 AQP2P41181 271 aa13.3□□□□□ -0.28
VPS9D1-201ENST00000389386 TAS2R19P59542 299 aa13.3□□□□□ -0.28
VPS9D1-201ENST00000389386 KRBOX4Q5JUW0 171 aa13.3□□□□□ -0.28
VPS9D1-201ENST00000389386 TMEM205Q6UW68 189 aa13.3□□□□□ -0.28
VPS9D1-201ENST00000389386 C17orf64Q86WR6 236 aa13.3□□□□□ -0.28
VPS9D1-201ENST00000389386 FGF13Q92913 245 aa13.3□□□□□ -0.28
VPS9D1-201ENST00000389386 ISOC2Q96AB3 205 aa13.3□□□□□ -0.28
VPS9D1-201ENST00000389386 NRTNQ99748 197 aa13.3□□□□□ -0.28
VPS9D1-201ENST00000389386 MICU1Q9BPX6 476 aa13.3□□□□□ -0.28
VPS9D1-201ENST00000389386 MTHFD2LQ9H903 347 aaPredicted RBP13.3□□□□□ -0.28
VPS9D1-201ENST00000389386 PLXNA2O75051 1894 aa13.3□□□□□ -0.28
VPS9D1-201ENST00000389386 PSMD9O00233 223 aa13.3□□□□□ -0.28
VPS9D1-201ENST00000389386 LILRB5O75023 590 aa13.3□□□□□ -0.28
VPS9D1-201ENST00000389386 FCGR3AP08637 254 aa13.3□□□□□ -0.28
VPS9D1-201ENST00000389386 ZNF735P0CB33 412 aa13.3□□□□□ -0.28
VPS9D1-201ENST00000389386 ZBTB25P24278 435 aa13.3□□□□□ -0.28
VPS9D1-201ENST00000389386 SOX2P48431 317 aa13.3□□□□□ -0.28
VPS9D1-201ENST00000389386 OR1Q1Q15612 314 aa13.3□□□□□ -0.28
VPS9D1-201ENST00000389386 NKPD1Q17RQ9 610 aa13.3□□□□□ -0.28
VPS9D1-201ENST00000389386 Q499Y3 187 aa13.3□□□□□ -0.28
VPS9D1-201ENST00000389386 ZNF227Q86WZ6 799 aa13.3□□□□□ -0.28
VPS9D1-201ENST00000389386 ANGPTL5Q86XS5 388 aa13.3□□□□□ -0.28
VPS9D1-201ENST00000389386 TMEM229BQ8NBD8 167 aa13.3□□□□□ -0.28
VPS9D1-201ENST00000389386 ZNRF4Q8WWF5 429 aa13.3□□□□□ -0.28
VPS9D1-201ENST00000389386 MALSU1Q96EH3 234 aa13.3□□□□□ -0.28
VPS9D1-201ENST00000389386 TNFRSF13CQ96RJ3 184 aa13.3□□□□□ -0.28
VPS9D1-201ENST00000389386 CENPVL1A0A0U1RR11 272 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 METTL21EPA6NDL7 271 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 AMY2AP04746 511 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 MC3RP41968 323 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 OR2B8PP59922 312 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 ZNF793Q6ZN11 406 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 RANBP3LQ86VV4 465 aaPredicted RBP13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 ETFBKMTQ8IXQ9 262 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 OR51D1Q8NGF3 324 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 OR4K13Q8NH42 304 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 FOXRED1Q96CU9 486 aaPredicted RBP13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 MEGF10Q96KG7 1140 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 CHRDQ9H2X0 955 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 TAC3Q9UHF0 121 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 SERTAD3Q9UJW9 196 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 TRAV8-7A0A075B6U6 113 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 SYNDIG1LA6NDD5 238 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 IFITM10A6NMD0 228 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 PRR32B1ATL7 298 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 HOXB5P09067 269 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 HOXA5P20719 270 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 PSMB6P28072 239 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 HOXA6P31267 233 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 CD80P33681 288 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 DIO1P49895 249 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 RBP2P50120 134 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 ACTBP60709 375 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 ACTG1P63261 375 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 ADAM5Q6NVV9 412 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 ARHGAP11AQ6P4F7 1023 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 REC114Q7Z4M0 266 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 OR13C8Q8NGS7 320 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 RRNAD1Q96FB5 475 aaKnown RBP13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 AKR1E2Q96JD6 320 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 SULT4A1Q9BR01 284 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 ZNF426Q9BUY5 554 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 PRDM13Q9H4Q3 707 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 PELI2Q9HAT8 420 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 PPP4R1LQ9P1A2 415 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 SLC27A6Q9Y2P4 619 aa13.29□□□□□ -0.28
VPS9D1-201ENST00000389386 TRBV6-7A0A0A0MS04 114 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 C7orf77A4D0Y5 90 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 FGF19O95750 216 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 MAS1P04201 325 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 LIPCP11150 499 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 ADH5P11766 374 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 NME1P15531 152 aaKnown RBP13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 SSR2P43308 183 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 PPICP45877 212 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 SPCS3P61009 180 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 FAM46CQ5VWP2 391 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 RHOUQ7L0Q8 258 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 LYG2Q86SG7 212 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 VN1R2Q8NFZ6 395 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 AKR7LQ8NHP1 331 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 SEH1LQ96EE3 360 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 PRAP1Q96NZ9 151 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms