RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 NOL3O60936 208 aaKnown RBP23.76■■□□□ 1.39
MSX1-201ENST00000382723 CRYABP02511 175 aaKnown RBP23.76■■□□□ 1.39
MSX1-201ENST00000382723 MT-ND5P03915 603 aa23.76■■□□□ 1.39
MSX1-201ENST00000382723 GAAP10253 952 aa23.76■■□□□ 1.39
MSX1-201ENST00000382723 SSX1Q16384 188 aa23.76■■□□□ 1.39
MSX1-201ENST00000382723 LIPKQ5VXJ0 399 aa23.76■■□□□ 1.39
MSX1-201ENST00000382723 ZC3HAV1Q7Z2W4 902 aaKnown RBP23.76■■□□□ 1.39
MSX1-201ENST00000382723 TUSC5Q8IXB3 177 aa23.76■■□□□ 1.39
MSX1-201ENST00000382723 THEM6Q8WUY1 208 aa23.76■■□□□ 1.39
MSX1-201ENST00000382723 SARAFQ96BY9 339 aa23.76■■□□□ 1.39
MSX1-201ENST00000382723 KCNG2Q9UJ96 466 aa23.76■■□□□ 1.39
MSX1-201ENST00000382723 ENPP5Q9UJA9 477 aa23.76■■□□□ 1.39
MSX1-201ENST00000382723 PTPRQQ9UMZ3 2332 aa23.76■■□□□ 1.39
MSX1-201ENST00000382723 SPENQ96T58 3664 aaKnown RBP23.76■■□□□ 1.39
MSX1-201ENST00000382723 DNAJC13O75165 2243 aa23.76■■□□□ 1.39
MSX1-201ENST00000382723 IGKV3D-15A0A087WSY6 115 aa23.76■■□□□ 1.39
MSX1-201ENST00000382723 CCRL2O00421 344 aa23.76■■□□□ 1.39
MSX1-201ENST00000382723 SLC43A1O75387 559 aa23.76■■□□□ 1.39
MSX1-201ENST00000382723 NR2C1P13056 603 aa23.76■■□□□ 1.39
MSX1-201ENST00000382723 ZNF823P16415 610 aa23.76■■□□□ 1.39
MSX1-201ENST00000382723 LAP3P28838 519 aa23.76■■□□□ 1.39
MSX1-201ENST00000382723 CDAP32320 146 aa23.76■■□□□ 1.39
MSX1-201ENST00000382723 ENTPD1P49961 510 aa23.76■■□□□ 1.39
MSX1-201ENST00000382723 SLC16A12Q6ZSM3 486 aa23.76■■□□□ 1.39
MSX1-201ENST00000382723 ANKRD13BQ86YJ7 626 aa23.76■■□□□ 1.39
MSX1-201ENST00000382723 MCEMP1Q8IX19 187 aa23.76■■□□□ 1.39
MSX1-201ENST00000382723 C20orf196Q8IYI0 205 aa23.76■■□□□ 1.39
MSX1-201ENST00000382723 ZNF420Q8TAQ5 688 aaPredicted RBP23.76■■□□□ 1.39
MSX1-201ENST00000382723 CALHM2Q9HA72 323 aa23.76■■□□□ 1.39
MSX1-201ENST00000382723 BABAM2Q9NXR7 383 aa23.76■■□□□ 1.39
MSX1-201ENST00000382723 FOXD3Q9UJU5 478 aaPredicted RBP23.76■■□□□ 1.39
MSX1-201ENST00000382723 ZMIZ1Q9ULJ6 1067 aa23.76■■□□□ 1.39
MSX1-201ENST00000382723 NOSIPQ9Y314 301 aaKnown RBP23.76■■□□□ 1.39
MSX1-201ENST00000382723 SLC22A20A6NK97 555 aa23.75■■□□□ 1.39
MSX1-201ENST00000382723 GPR171O14626 319 aa23.75■■□□□ 1.39
MSX1-201ENST00000382723 TGM6O95932 706 aa23.75■■□□□ 1.39
MSX1-201ENST00000382723 TMBIM6P55061 237 aa23.75■■□□□ 1.39
MSX1-201ENST00000382723 ACTA2P62736 377 aa23.75■■□□□ 1.39
MSX1-201ENST00000382723 ACTG2P63267 376 aa23.75■■□□□ 1.39
MSX1-201ENST00000382723 CNPY1Q3B7I2 92 aa23.75■■□□□ 1.39
MSX1-201ENST00000382723 OTOSQ8NHW6 89 aa23.75■■□□□ 1.39
MSX1-201ENST00000382723 HTRA1Q92743 480 aa23.75■■□□□ 1.39
MSX1-201ENST00000382723 C12orf43Q96C57 262 aaKnown RBP23.75■■□□□ 1.39
MSX1-201ENST00000382723 EMC3Q9P0I2 261 aa23.75■■□□□ 1.39
MSX1-201ENST00000382723 GNG8Q9UK08 70 aa23.75■■□□□ 1.39
MSX1-201ENST00000382723 CACNA1AO00555 2505 aa23.75■■□□□ 1.39
MSX1-201ENST00000382723 PRR32B1ATL7 298 aa23.74■■□□□ 1.39
MSX1-201ENST00000382723 FAM180AQ6UWF9 173 aa23.74■■□□□ 1.39
MSX1-201ENST00000382723 C11orf40Q8WZ69 217 aa23.74■■□□□ 1.39
MSX1-201ENST00000382723 ULBP2Q9BZM5 246 aa23.74■■□□□ 1.39
MSX1-201ENST00000382723 H3BMQ9 156 aa23.74■■□□□ 1.39
MSX1-201ENST00000382723 ALOX5APP20292 161 aa23.74■■□□□ 1.39
MSX1-201ENST00000382723 GADD45AP24522 165 aa23.74■■□□□ 1.39
MSX1-201ENST00000382723 LSM3P62310 102 aaKnown RBP23.74■■□□□ 1.39
MSX1-201ENST00000382723 RNPS1Q15287 305 aaKnown RBP23.74■■□□□ 1.39
MSX1-201ENST00000382723 CDONQ4KMG0 1287 aa23.74■■□□□ 1.39
MSX1-201ENST00000382723 RPL3LQ92901 407 aaKnown RBP23.74■■□□□ 1.39
MSX1-201ENST00000382723 INTS12Q96CB8 462 aaKnown RBP23.74■■□□□ 1.39
MSX1-201ENST00000382723 MNTQ99583 582 aa23.74■■□□□ 1.39
MSX1-201ENST00000382723 ISYNA1Q9NPH2 558 aa23.74■■□□□ 1.39
MSX1-201ENST00000382723 TMEM14AQ9Y6G1 99 aa23.74■■□□□ 1.39
MSX1-201ENST00000382723 E9PI62 339 aa23.73■■□□□ 1.39
MSX1-201ENST00000382723 UPK3AO75631 287 aa23.73■■□□□ 1.39
MSX1-201ENST00000382723 VASH1Q7L8A9 365 aaPredicted RBP23.73■■□□□ 1.39
MSX1-201ENST00000382723 PHC2Q8IXK0 858 aa23.73■■□□□ 1.39
MSX1-201ENST00000382723 OR10H5Q8NGA6 315 aa23.73■■□□□ 1.39
MSX1-201ENST00000382723 RAB2BQ8WUD1 216 aa23.73■■□□□ 1.39
MSX1-201ENST00000382723 UFD1Q92890 307 aa23.73■■□□□ 1.39
MSX1-201ENST00000382723 TMEM45BQ96B21 275 aa23.73■■□□□ 1.39
MSX1-201ENST00000382723 MRPL48Q96GC5 212 aaKnown RBP23.73■■□□□ 1.39
MSX1-201ENST00000382723 RBM24Q9BX46 236 aaKnown RBP23.73■■□□□ 1.39
MSX1-201ENST00000382723 ATMQ13315 3056 aa23.73■■□□□ 1.39
MSX1-201ENST00000382723 MRPL33O75394 65 aaKnown RBP23.72■■□□□ 1.39
MSX1-201ENST00000382723 CPEP16870 476 aa23.72■■□□□ 1.39
MSX1-201ENST00000382723 LINC00346Q8IVM7 164 aa23.72■■□□□ 1.39
MSX1-201ENST00000382723 Q8NA96 180 aa23.72■■□□□ 1.39
MSX1-201ENST00000382723 TRIB1Q96RU8 372 aa23.72■■□□□ 1.39
MSX1-201ENST00000382723 AMELYQ99218 206 aa23.72■■□□□ 1.39
MSX1-201ENST00000382723 CDADC1Q9BWV3 514 aa23.72■■□□□ 1.39
MSX1-201ENST00000382723 EMC7Q9NPA0 242 aa23.72■■□□□ 1.39
MSX1-201ENST00000382723 TRIM36Q9NQ86 728 aa23.72■■□□□ 1.39
MSX1-201ENST00000382723 ZNF175Q9Y473 711 aa23.72■■□□□ 1.39
MSX1-201ENST00000382723 UGT2A1Q9Y4X1 527 aa23.72■■□□□ 1.39
MSX1-201ENST00000382723 LRRTM2O43300 516 aa23.72■■□□□ 1.39
MSX1-201ENST00000382723 EIF2B1Q14232 305 aaKnown RBP23.72■■□□□ 1.39
MSX1-201ENST00000382723 RPTNQ6XPR3 784 aa23.72■■□□□ 1.39
MSX1-201ENST00000382723 P4HA3Q7Z4N8 544 aa23.72■■□□□ 1.39
MSX1-201ENST00000382723 ATCAYQ86WG3 371 aa23.72■■□□□ 1.39
MSX1-201ENST00000382723 GPR137CQ8N3F9 429 aa23.72■■□□□ 1.39
MSX1-201ENST00000382723 GPR137Q96N19 417 aa23.72■■□□□ 1.39
MSX1-201ENST00000382723 DOK1Q99704 481 aa23.72■■□□□ 1.39
MSX1-201ENST00000382723 OR51E2Q9H255 320 aa23.72■■□□□ 1.39
MSX1-201ENST00000382723 BCO1Q9HAY6 547 aa23.72■■□□□ 1.39
MSX1-201ENST00000382723 ACOXLQ9NUZ1 547 aa23.72■■□□□ 1.39
MSX1-201ENST00000382723 IKZF2Q9UKS7 526 aa23.72■■□□□ 1.39
MSX1-201ENST00000382723 GRIP1Q9Y3R0 1128 aa23.72■■□□□ 1.39
MSX1-201ENST00000382723 CACNA1GO43497 2377 aa23.71■■□□□ 1.39
MSX1-201ENST00000382723 ZNF701M0R085 212 aaPredicted RBP23.71■■□□□ 1.39
MSX1-201ENST00000382723 DHHO43323 396 aa23.71■■□□□ 1.39
MSX1-201ENST00000382723 GABARAPO95166 117 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms