RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 NABP1Q96AH0 204 aa12.09□□□□□ -0.47
SHOX-202ENST00000381575 RCN3Q96D15 328 aa12.09□□□□□ -0.47
SHOX-202ENST00000381575 SEPHS2Q99611 448 aa12.09□□□□□ -0.47
SHOX-202ENST00000381575 HINT3Q9NQE9 182 aaKnown RBP12.09□□□□□ -0.47
SHOX-202ENST00000381575 MED31Q9Y3C7 131 aa12.09□□□□□ -0.47
SHOX-202ENST00000381575 SNX13Q9Y5W8 968 aa12.09□□□□□ -0.47
SHOX-202ENST00000381575 CACNG2Q9Y698 323 aa12.09□□□□□ -0.47
SHOX-202ENST00000381575 IGLV3-9A0A075B6K5 115 aa12.08□□□□□ -0.48
SHOX-202ENST00000381575 TRAV27A0A087WT01 109 aa12.08□□□□□ -0.48
SHOX-202ENST00000381575 BBIP1A8MTZ0 92 aa12.08□□□□□ -0.48
SHOX-202ENST00000381575 C17orf100A8MU93 164 aa12.08□□□□□ -0.48
SHOX-202ENST00000381575 J3KTA2 159 aa12.08□□□□□ -0.48
SHOX-202ENST00000381575 MGRN1O60291 552 aa12.08□□□□□ -0.48
SHOX-202ENST00000381575 RGS9O75916 674 aaPredicted RBP12.08□□□□□ -0.48
SHOX-202ENST00000381575 SNAP29O95721 258 aa12.08□□□□□ -0.48
SHOX-202ENST00000381575 VIMP08670 466 aaKnown RBP12.08□□□□□ -0.48
SHOX-202ENST00000381575 IFI30P13284 250 aa12.08□□□□□ -0.48
SHOX-202ENST00000381575 ZNF250P15622 560 aa12.08□□□□□ -0.48
SHOX-202ENST00000381575 ITGA2P17301 1181 aa12.08□□□□□ -0.48
SHOX-202ENST00000381575 MAKP20794 623 aa12.08□□□□□ -0.48
SHOX-202ENST00000381575 KDELR2P33947 212 aa12.08□□□□□ -0.48
SHOX-202ENST00000381575 WNT5AP41221 380 aa12.08□□□□□ -0.48
SHOX-202ENST00000381575 DVL1P1P54792 670 aaPredicted RBP12.08□□□□□ -0.48
SHOX-202ENST00000381575 UCP2P55851 309 aa12.08□□□□□ -0.48
SHOX-202ENST00000381575 MVKQ03426 396 aa12.08□□□□□ -0.48
SHOX-202ENST00000381575 PLP2Q04941 152 aa12.08□□□□□ -0.48
SHOX-202ENST00000381575 TSTQ16762 297 aaKnown RBP12.08□□□□□ -0.48
SHOX-202ENST00000381575 ALG10Q5BKT4 473 aa12.08□□□□□ -0.48
SHOX-202ENST00000381575 C10orf128Q5T292 105 aa12.08□□□□□ -0.48
SHOX-202ENST00000381575 TMEM154Q6P9G4 183 aa12.08□□□□□ -0.48
SHOX-202ENST00000381575 THSD4Q6ZMP0 1018 aa12.08□□□□□ -0.48
SHOX-202ENST00000381575 GLCCI1Q86VQ1 547 aa12.08□□□□□ -0.48
SHOX-202ENST00000381575 ZNF101Q8IZC7 436 aa12.08□□□□□ -0.48
SHOX-202ENST00000381575 OR2T12Q8NG77 320 aa12.08□□□□□ -0.48
SHOX-202ENST00000381575 OR1J1Q8NGS3 322 aa12.08□□□□□ -0.48
SHOX-202ENST00000381575 SNX33Q8WV41 574 aa12.08□□□□□ -0.48
SHOX-202ENST00000381575 C11orf40Q8WZ69 217 aa12.08□□□□□ -0.48
SHOX-202ENST00000381575 NMD3Q96D46 503 aaKnown RBP12.08□□□□□ -0.48
SHOX-202ENST00000381575 RACGAP1Q9H0H5 632 aa12.08□□□□□ -0.48
SHOX-202ENST00000381575 CCNB1IP1Q9NPC3 277 aa12.08□□□□□ -0.48
SHOX-202ENST00000381575 HIF1ANQ9NWT6 349 aa12.08□□□□□ -0.48
SHOX-202ENST00000381575 A4GNTQ9UNA3 340 aa12.08□□□□□ -0.48
SHOX-202ENST00000381575 DYSFO75923 2080 aa12.08□□□□□ -0.48
SHOX-202ENST00000381575 LOC100509620A0A075B734 347 aa12.07□□□□□ -0.48
SHOX-202ENST00000381575 SLC22A23A1A5C7 686 aa12.07□□□□□ -0.48
SHOX-202ENST00000381575 B4DSR2 109 aa12.07□□□□□ -0.48
SHOX-202ENST00000381575 H7C1C5 153 aa12.07□□□□□ -0.48
SHOX-202ENST00000381575 IFNA14P01570 189 aa12.07□□□□□ -0.48
SHOX-202ENST00000381575 TSPAN19P0C672 248 aa12.07□□□□□ -0.48
SHOX-202ENST00000381575 GAAP10253 952 aa12.07□□□□□ -0.48
SHOX-202ENST00000381575 STOMP27105 288 aa12.07□□□□□ -0.48
SHOX-202ENST00000381575 RBMXP38159 391 aaKnown RBP12.07□□□□□ -0.48
SHOX-202ENST00000381575 MPV17P39210 176 aa12.07□□□□□ -0.48
SHOX-202ENST00000381575 ZNF133P52736 654 aaPredicted RBP12.07□□□□□ -0.48
SHOX-202ENST00000381575 SELENOVP59797 346 aa12.07□□□□□ -0.48
SHOX-202ENST00000381575 LCN6P62502 163 aa12.07□□□□□ -0.48
SHOX-202ENST00000381575 MAPRE2Q15555 327 aa12.07□□□□□ -0.48
SHOX-202ENST00000381575 COQ5Q5HYK3 327 aa12.07□□□□□ -0.48
SHOX-202ENST00000381575 SLC25A47Q6Q0C1 308 aa12.07□□□□□ -0.48
SHOX-202ENST00000381575 HDDC2Q7Z4H3 204 aa12.07□□□□□ -0.48
SHOX-202ENST00000381575 OR1J2Q8NGS2 313 aa12.07□□□□□ -0.48
SHOX-202ENST00000381575 OR13C2Q8NGS9 318 aa12.07□□□□□ -0.48
SHOX-202ENST00000381575 OR51A7Q8NH64 312 aa12.07□□□□□ -0.48
SHOX-202ENST00000381575 ZNF519Q8TB69 540 aa12.07□□□□□ -0.48
SHOX-202ENST00000381575 TMEM186Q96B77 213 aa12.07□□□□□ -0.48
SHOX-202ENST00000381575 BPIFA2Q96DR5 249 aa12.07□□□□□ -0.48
SHOX-202ENST00000381575 PRRC1Q96M27 445 aa12.07□□□□□ -0.48
SHOX-202ENST00000381575 POLR2J2Q9GZM3 115 aaKnown RBP12.07□□□□□ -0.48
SHOX-202ENST00000381575 POLR2J3Q9H1A7 115 aaKnown RBP12.07□□□□□ -0.48
SHOX-202ENST00000381575 TXNIPQ9H3M7 391 aa12.07□□□□□ -0.48
SHOX-202ENST00000381575 C1orf198Q9H425 327 aa12.07□□□□□ -0.48
SHOX-202ENST00000381575 METTL17Q9H7H0 456 aaPredicted RBP12.07□□□□□ -0.48
SHOX-202ENST00000381575 SIAEQ9HAT2 523 aa12.07□□□□□ -0.48
SHOX-202ENST00000381575 GID8Q9NWU2 228 aa12.07□□□□□ -0.48
SHOX-202ENST00000381575 CMTM6Q9NX76 183 aa12.07□□□□□ -0.48
SHOX-202ENST00000381575 CAPN7Q9Y6W3 813 aa12.07□□□□□ -0.48
SHOX-202ENST00000381575 A0A1W2PPL8 197 aa12.06□□□□□ -0.48
SHOX-202ENST00000381575 ELOVL7A1L3X0 281 aa12.06□□□□□ -0.48
SHOX-202ENST00000381575 C5orf49A4QMS7 147 aa12.06□□□□□ -0.48
SHOX-202ENST00000381575 TPD52L2O43399 206 aaKnown RBP12.06□□□□□ -0.48
SHOX-202ENST00000381575 PTHP01270 115 aa12.06□□□□□ -0.48
SHOX-202ENST00000381575 MSMBP08118 114 aa12.06□□□□□ -0.48
SHOX-202ENST00000381575 DRD4P21917 467 aa12.06□□□□□ -0.48
SHOX-202ENST00000381575 LAP3P28838 519 aa12.06□□□□□ -0.48
SHOX-202ENST00000381575 RAD52P43351 418 aa12.06□□□□□ -0.48
SHOX-202ENST00000381575 CTXN1P60606 82 aa12.06□□□□□ -0.48
SHOX-202ENST00000381575 LMO4P61968 165 aa12.06□□□□□ -0.48
SHOX-202ENST00000381575 MRPS34P82930 218 aaKnown RBP12.06□□□□□ -0.48
SHOX-202ENST00000381575 PSG4Q00888 419 aa12.06□□□□□ -0.48
SHOX-202ENST00000381575 GUCY1A3Q02108 690 aa12.06□□□□□ -0.48
SHOX-202ENST00000381575 THEM4Q5T1C6 240 aa12.06□□□□□ -0.48
SHOX-202ENST00000381575 RFPL4BQ6ZWI9 263 aa12.06□□□□□ -0.48
SHOX-202ENST00000381575 USP51Q70EK9 711 aa12.06□□□□□ -0.48
SHOX-202ENST00000381575 DPPA2Q7Z7J5 298 aa12.06□□□□□ -0.48
SHOX-202ENST00000381575 NRMQ8IXM6 262 aa12.06□□□□□ -0.48
SHOX-202ENST00000381575 PCYOX1LQ8NBM8 494 aa12.06□□□□□ -0.48
SHOX-202ENST00000381575 IPCEF1Q8WWN9 437 aaPredicted RBP12.06□□□□□ -0.48
SHOX-202ENST00000381575 LIPHQ8WWY8 451 aa12.06□□□□□ -0.48
SHOX-202ENST00000381575 LRRC37BQ96QE4 947 aa12.06□□□□□ -0.48
SHOX-202ENST00000381575 ZNF416Q9BWM5 594 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms