RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 SLC35G5Q96KT7 338 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 TAAR9Q96RI9 348 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 SRMSQ9H3Y6 488 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 FSCN3Q9NQT6 498 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 GXYLT2A0PJZ3 443 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 A6NLC8 198 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 RNASEK-C17orf49H0YIS7 233 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 EPPINO95925 133 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 RPN2P04844 631 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 SBK2P0C263 348 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 OR4E1P0C645 316 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 CALCBP10092 127 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 NME1P15531 152 aaKnown RBP11.04□□□□□ -0.64
C9orf3-203ENST00000375315 BCKDHBP21953 392 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 MAGEB1P43366 347 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 ZNF85Q03923 595 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 ELAVL1Q15717 326 aaKnown RBP11.04□□□□□ -0.64
C9orf3-203ENST00000375315 KIAA0895LQ68EN5 471 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 SYT13Q7L8C5 426 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 BAP18Q8IXM2 172 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 AMER3Q8N944 861 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 ELF4Q99607 663 aaPredicted RBP11.04□□□□□ -0.64
C9orf3-203ENST00000375315 CHST6Q9GZX3 395 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 OR51V1Q9H2C8 321 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 C1orf198Q9H425 327 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 POFUT1Q9H488 388 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 TUBA4BQ9H853 241 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 KRCC1Q9NPI7 259 aaPredicted RBP11.04□□□□□ -0.64
C9orf3-203ENST00000375315 PCDHGA1Q9Y5H4 931 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 V9GY05 133 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 BTBD17A6NE02 478 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 BLOC1S5-TXNDC5H3BN57 136 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 OGG1O15527 345 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 IFNA17P01571 189 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 CD74P04233 296 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 GTF2F2P13984 249 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 CAV2P51636 162 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 NUBP1P53384 320 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 CASP6P55212 293 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 CLDN12P56749 244 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 ERV3-1Q14264 604 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 CDK5R1Q15078 307 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 LPAL2Q16609 132 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 NRMQ8IXM6 262 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 MIB2Q96AX9 1013 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 C3orf49Q96BT1 292 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 PIK3IP1Q96FE7 263 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 NEU1Q99519 415 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 C2orf88Q9BSF0 95 aa11.04□□□□□ -0.64
C9orf3-203ENST00000375315 MRPS17Q9Y2R5 130 aaKnown RBP11.04□□□□□ -0.64
C9orf3-203ENST00000375315 IGHV1OR15-9A0A0B4J2B8 117 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 FAM86C2PA6NEL3 165 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 GLSO94925 669 aaPredicted RBP11.03□□□□□ -0.64
C9orf3-203ENST00000375315 RAB28P51157 221 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 PRKXP51817 358 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 SRSF4Q08170 494 aaKnown RBP11.03□□□□□ -0.64
C9orf3-203ENST00000375315 DECR1Q16698 335 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 TCEAL6Q6IPX3 200 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 FIGNL1Q6PIW4 674 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 SLC30A7Q8NEW0 376 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 SUN3Q8TAQ9 357 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 ZCCHC10Q8TBK6 192 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 LMX1AQ8TE12 382 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 PPP1R1CQ8WVI7 109 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 KISS1RQ969F8 398 aaPredicted RBP11.03□□□□□ -0.64
C9orf3-203ENST00000375315 EFCAB11Q9BUY7 163 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 HRH4Q9H3N8 390 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 NOX4Q9NPH5 578 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 STARD5Q9NSY2 213 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 OR5V1Q9UGF6 321 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 APOBEC3BQ9UH17 382 aaKnown RBP11.03□□□□□ -0.64
C9orf3-203ENST00000375315 A0A1B0GTI1 187 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 PRAMEF27A3QJZ7 478 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 TSTD3H0UI37 97 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 KLHL18O94889 574 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 CD34P28906 385 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 DDTP30046 118 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 NAAAQ02083 359 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 GPR18Q14330 331 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 DEFB133Q30KQ1 61 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 DEFB110Q30KQ9 67 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 ADAM5Q6NVV9 412 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 DPPA2Q7Z7J5 298 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 SHISA5Q8N114 240 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 RAB42Q8N4Z0 105 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 NUDCD2Q8WVJ2 157 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 DIO2Q92813 273 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 SGPP1Q9BX95 441 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 SLC25A18Q9H1K4 315 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 BCL2L10Q9HD36 194 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 SLC2A4RGQ9NR83 387 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 SIT1Q9Y3P8 196 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 ETV7Q9Y603 341 aa11.03□□□□□ -0.64
C9orf3-203ENST00000375315 EP300Q09472 2414 aaPredicted RBP11.03□□□□□ -0.64
C9orf3-203ENST00000375315 PRAMEF26H0Y7S4 382 aa11.02□□□□□ -0.64
C9orf3-203ENST00000375315 B4GALT2O60909 372 aa11.02□□□□□ -0.64
C9orf3-203ENST00000375315 CTNSO60931 367 aa11.02□□□□□ -0.64
C9orf3-203ENST00000375315 NTN1O95631 604 aa11.02□□□□□ -0.64
C9orf3-203ENST00000375315 TNFP01375 233 aa11.02□□□□□ -0.64
C9orf3-203ENST00000375315 HIST1H1BP16401 226 aaKnown RBP11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms