RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 PCDHGA9Q9Y5G4 932 aaKnown RBP10.87□□□□□ -0.67
HMGCL-202ENST00000374487 ACACBO00763 2458 aa10.87□□□□□ -0.67
HMGCL-202ENST00000374487 SLC22A23A1A5C7 686 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 OR4C45A6NMZ5 311 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 H3BSH0 61 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 TNFSF15O95150 251 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 ARSBP15848 533 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 CRABP1P29762 137 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 APOBEC1P41238 236 aaKnown RBP10.86□□□□□ -0.67
HMGCL-202ENST00000374487 AGFG1P52594 562 aaKnown RBP10.86□□□□□ -0.67
HMGCL-202ENST00000374487 CLDN12P56749 244 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 ADAM8P78325 824 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 GLO1Q04760 184 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 PUDPQ08623 228 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 MELKQ14680 651 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 SF3B4Q15427 424 aaKnown RBP eCLIP10.86□□□□□ -0.67
HMGCL-202ENST00000374487 OR7A5Q15622 319 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 MEP1BQ16820 701 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 SLC36A2Q495M3 483 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 LRRN1Q6UXK5 716 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 C8orf44Q96CB5 159 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 AMELYQ99218 206 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 MRI1Q9BV20 369 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 DPAGT1Q9H3H5 408 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 ELOVL3Q9HB03 270 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 VSX1Q9NZR4 365 aaPredicted RBP10.86□□□□□ -0.67
HMGCL-202ENST00000374487 GTF2A1LQ9UNN4 478 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 ANXA2P2A6NMY6 339 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 HSPB2A8KAH6 182 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 ZFAND5O76080 213 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 DHFRP00374 187 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 RAF1P04049 648 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 ANXA2P07355 339 aaKnown RBP10.86□□□□□ -0.67
HMGCL-202ENST00000374487 CTLA4P16410 223 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 NAGAP17050 411 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 SUMO3P55854 103 aaPredicted RBP10.86□□□□□ -0.67
HMGCL-202ENST00000374487 MFSD13AQ14CX5 517 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 RTP5Q14D33 572 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 HSPB2Q16082 182 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 ST3GAL2Q16842 350 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 PLA1AQ53H76 456 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 FAM69BQ5VUD6 431 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 KCTD18Q6PI47 426 aaPredicted RBP10.86□□□□□ -0.67
HMGCL-202ENST00000374487 ARSKQ6UWY0 536 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 LINGO2Q7L985 606 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 PRSS45Q7RTY3 260 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 KRT77Q7Z794 578 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 NOXA1Q86UR1 476 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 SIAH3Q8IW03 269 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 TMEM106AQ96A25 262 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 DDIT4LQ96D03 193 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 S100A16Q96FQ6 103 aaKnown RBP10.86□□□□□ -0.67
HMGCL-202ENST00000374487 DCBLD2Q96PD2 775 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 APMAPQ9HDC9 416 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 ASCL3Q9NQ33 180 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 NUDT15Q9NV35 164 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 ING3Q9NXR8 418 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 RABL2AQ9UBK7 228 aaPredicted RBP10.86□□□□□ -0.67
HMGCL-202ENST00000374487 C19orf25Q9UFG5 118 aaPredicted RBP10.86□□□□□ -0.67
HMGCL-202ENST00000374487 PPIEQ9UNP9 301 aaKnown RBP10.86□□□□□ -0.67
HMGCL-202ENST00000374487 RABL2BQ9UNT1 228 aa10.86□□□□□ -0.67
HMGCL-202ENST00000374487 MAP1BP46821 2468 aaKnown RBP10.86□□□□□ -0.67
HMGCL-202ENST00000374487 FER1L5A0AVI2 2057 aa10.85□□□□□ -0.67
HMGCL-202ENST00000374487 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.85□□□□□ -0.67
HMGCL-202ENST00000374487 TRBV5-5A0A0J9YX44 114 aa10.85□□□□□ -0.67
HMGCL-202ENST00000374487 VSTM2BA6NLU5 285 aa10.85□□□□□ -0.67
HMGCL-202ENST00000374487 CENPBD1B2RD01 187 aa10.85□□□□□ -0.67
HMGCL-202ENST00000374487 NPIPA5E9PKD4 350 aa10.85□□□□□ -0.67
HMGCL-202ENST00000374487 MEN1O00255 615 aa10.85□□□□□ -0.67
HMGCL-202ENST00000374487 ADAM10O14672 748 aa10.85□□□□□ -0.67
HMGCL-202ENST00000374487 ZNF254O75437 659 aa10.85□□□□□ -0.67
HMGCL-202ENST00000374487 IGHMP01871 453 aa10.85□□□□□ -0.67
HMGCL-202ENST00000374487 MAS1P04201 325 aa10.85□□□□□ -0.67
HMGCL-202ENST00000374487 YES1P07947 543 aa10.85□□□□□ -0.67
HMGCL-202ENST00000374487 HLA-DOBP13765 273 aa10.85□□□□□ -0.67
HMGCL-202ENST00000374487 ZNF41P51814 821 aaPredicted RBP10.85□□□□□ -0.67
HMGCL-202ENST00000374487 RRAS2P62070 204 aaPredicted RBP10.85□□□□□ -0.67
HMGCL-202ENST00000374487 BTG1P62324 171 aa10.85□□□□□ -0.67
HMGCL-202ENST00000374487 SNTB2Q13425 540 aaKnown RBP10.85□□□□□ -0.67
HMGCL-202ENST00000374487 SLC17A1Q14916 467 aa10.85□□□□□ -0.67
HMGCL-202ENST00000374487 ETFDHQ16134 617 aa10.85□□□□□ -0.67
HMGCL-202ENST00000374487 MTFR2Q6P444 385 aa10.85□□□□□ -0.67
HMGCL-202ENST00000374487 FAM199XQ6PEV8 388 aaPredicted RBP10.85□□□□□ -0.67
HMGCL-202ENST00000374487 H1FNTQ75WM6 255 aaPredicted RBP10.85□□□□□ -0.67
HMGCL-202ENST00000374487 SERPINA12Q8IW75 414 aa10.85□□□□□ -0.67
HMGCL-202ENST00000374487 ZNF679Q8IYX0 411 aa10.85□□□□□ -0.67
HMGCL-202ENST00000374487 PRSS35Q8N3Z0 413 aa10.85□□□□□ -0.67
HMGCL-202ENST00000374487 OR8K3Q8NH51 312 aa10.85□□□□□ -0.67
HMGCL-202ENST00000374487 TSEN15Q8WW01 171 aaKnown RBP10.85□□□□□ -0.67
HMGCL-202ENST00000374487 TTC9Q92623 222 aa10.85□□□□□ -0.67
HMGCL-202ENST00000374487 HGDQ93099 445 aa10.85□□□□□ -0.67
HMGCL-202ENST00000374487 ARL5BQ96KC2 179 aa10.85□□□□□ -0.67
HMGCL-202ENST00000374487 OR8B4Q96RC9 309 aa10.85□□□□□ -0.67
HMGCL-202ENST00000374487 NPAS1Q99742 590 aa10.85□□□□□ -0.67
HMGCL-202ENST00000374487 WDR77Q9BQA1 342 aaPredicted RBP10.85□□□□□ -0.67
HMGCL-202ENST00000374487 ULBP3Q9BZM4 244 aa10.85□□□□□ -0.67
HMGCL-202ENST00000374487 METTL7AQ9H8H3 244 aa10.85□□□□□ -0.67
HMGCL-202ENST00000374487 ANKRD10Q9NXR5 420 aa10.85□□□□□ -0.67
HMGCL-202ENST00000374487 FOXJ2Q9P0K8 574 aa10.85□□□□□ -0.67
HMGCL-202ENST00000374487 PPP4R1LQ9P1A2 415 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms