RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 GPR148Q8TDV2 347 aa14.34□□□□□ -0.11
CNKSR1-202ENST00000374253 ADAMTS14Q8WXS8 1223 aa14.34□□□□□ -0.11
CNKSR1-202ENST00000374253 ITFG2Q969R8 447 aa14.34□□□□□ -0.11
CNKSR1-202ENST00000374253 CACNG6Q9BXT2 260 aa14.34□□□□□ -0.11
CNKSR1-202ENST00000374253 LOC101059948A0A1B0GTJ6 334 aa14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 GMDSO60547 372 aa14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 ZNF254O75437 659 aa14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 TCRBP04435 133 aa14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 KLK2P20151 261 aa14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 HOXD12P35452 270 aa14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 ZNF679Q8IYX0 411 aa14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 FAM210AQ96ND0 272 aa14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 TMEM246Q9BRR3 403 aa14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 DEFB126Q9BYW3 111 aa14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 DPAGT1Q9H3H5 408 aa14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 LRP12Q9Y561 859 aa14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 PHF3Q92576 2039 aaKnown RBP14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 TMEM212A6NML5 194 aa14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 G3V3Y1 287 aa14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 ZFAND5O76080 213 aa14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 SFTPDP35247 375 aa14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 PTGDSP41222 190 aa14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 ZNF41P51814 821 aaPredicted RBP14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 EFNB2P52799 333 aa14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 GLO1Q04760 184 aa14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 SNTB2Q13425 540 aaKnown RBP14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 FCN2Q15485 313 aa14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 TMEM69Q5SWH9 247 aa14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 H1FNTQ75WM6 255 aaPredicted RBP14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 NDUFAF7Q7L592 441 aa14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 GPAT4Q86UL3 456 aa14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 MISPQ8IVT2 679 aa14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 DND1Q8IYX4 353 aaKnown RBP14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 DEFB123Q8N688 67 aa14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 PLPP7Q8NBV4 271 aa14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 SMIM4Q8WVI0 70 aa14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 ST8SIA1Q92185 356 aa14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 PHYHIPQ92561 330 aa14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 PHF21AQ96BD5 680 aa14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 MS4A3Q96HJ5 214 aa14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 FLVCR2Q9UPI3 526 aa14.33□□□□□ -0.12
CNKSR1-202ENST00000374253 BDP1A6H8Y1 2624 aa14.32□□□□□ -0.12
CNKSR1-202ENST00000374253 MAPK3P27361 379 aaPredicted RBP14.32□□□□□ -0.12
CNKSR1-202ENST00000374253 SNRPD2P62316 118 aaKnown RBP14.32□□□□□ -0.12
CNKSR1-202ENST00000374253 MYBPHQ13203 477 aa14.32□□□□□ -0.12
CNKSR1-202ENST00000374253 CCDC157Q569K6 752 aa14.32□□□□□ -0.12
CNKSR1-202ENST00000374253 FAM205BPQ63HN1 556 aa14.32□□□□□ -0.12
CNKSR1-202ENST00000374253 ASPHD2Q6ICH7 369 aa14.32□□□□□ -0.12
CNKSR1-202ENST00000374253 DCXRQ7Z4W1 244 aa14.32□□□□□ -0.12
CNKSR1-202ENST00000374253 OR51D1Q8NGF3 324 aa14.32□□□□□ -0.12
CNKSR1-202ENST00000374253 OR5L2Q8NGL0 311 aa14.32□□□□□ -0.12
CNKSR1-202ENST00000374253 POC1BQ8TC44 478 aa14.32□□□□□ -0.12
CNKSR1-202ENST00000374253 ASB10Q8WXI3 467 aa14.32□□□□□ -0.12
CNKSR1-202ENST00000374253 AKAP1Q92667 903 aaKnown RBP eCLIP14.32□□□□□ -0.12
CNKSR1-202ENST00000374253 RASL10BQ96S79 203 aa14.32□□□□□ -0.12
CNKSR1-202ENST00000374253 MFRPQ9BY79 579 aa14.32□□□□□ -0.12
CNKSR1-202ENST00000374253 MYEF2Q9P2K5 600 aaKnown RBP14.32□□□□□ -0.12
CNKSR1-202ENST00000374253 RPH3AQ9Y2J0 694 aaPredicted RBP14.32□□□□□ -0.12
CNKSR1-202ENST00000374253 EMC9Q9Y3B6 208 aa14.32□□□□□ -0.12
CNKSR1-202ENST00000374253 PTH2RP49190 550 aa14.32□□□□□ -0.12
CNKSR1-202ENST00000374253 BIDP55957 195 aa14.32□□□□□ -0.12
CNKSR1-202ENST00000374253 HSF1Q00613 529 aa14.32□□□□□ -0.12
CNKSR1-202ENST00000374253 KLF9Q13886 244 aaPredicted RBP14.32□□□□□ -0.12
CNKSR1-202ENST00000374253 TRIM61Q5EBN2 209 aa14.32□□□□□ -0.12
CNKSR1-202ENST00000374253 LRFN4Q6PJG9 635 aa14.32□□□□□ -0.12
CNKSR1-202ENST00000374253 LYPD8Q6UX82 237 aa14.32□□□□□ -0.12
CNKSR1-202ENST00000374253 MR1Q95460 341 aa14.32□□□□□ -0.12
CNKSR1-202ENST00000374253 SNX18Q96RF0 628 aa14.32□□□□□ -0.12
CNKSR1-202ENST00000374253 CENPMQ9NSP4 180 aa14.32□□□□□ -0.12
CNKSR1-202ENST00000374253 FOXJ3Q9UPW0 622 aa14.32□□□□□ -0.12
CNKSR1-202ENST00000374253 LAMTOR5O43504 91 aa14.31□□□□□ -0.12
CNKSR1-202ENST00000374253 LMX1BO60663 402 aa14.31□□□□□ -0.12
CNKSR1-202ENST00000374253 APOBEC1P41238 236 aaKnown RBP14.31□□□□□ -0.12
CNKSR1-202ENST00000374253 RASGEF1BQ0VAM2 473 aa14.31□□□□□ -0.12
CNKSR1-202ENST00000374253 CARD17Q5XLA6 110 aa14.31□□□□□ -0.12
CNKSR1-202ENST00000374253 NAT6Q93015 286 aa14.31□□□□□ -0.12
CNKSR1-202ENST00000374253 DDIT4LQ96D03 193 aa14.31□□□□□ -0.12
CNKSR1-202ENST00000374253 S100A16Q96FQ6 103 aaKnown RBP14.31□□□□□ -0.12
CNKSR1-202ENST00000374253 CHST11Q9NPF2 352 aa14.31□□□□□ -0.12
CNKSR1-202ENST00000374253 WIF1Q9Y5W5 379 aa14.31□□□□□ -0.12
CNKSR1-202ENST00000374253 TRBV5-7A0A0A0MS05 114 aa14.31□□□□□ -0.12
CNKSR1-202ENST00000374253 ZNF814B7Z6K7 855 aa14.31□□□□□ -0.12
CNKSR1-202ENST00000374253 ITGA5P08648 1049 aa14.31□□□□□ -0.12
CNKSR1-202ENST00000374253 CAMK2DQ13557 499 aa14.31□□□□□ -0.12
CNKSR1-202ENST00000374253 PLPPR5Q32ZL2 321 aa14.31□□□□□ -0.12
CNKSR1-202ENST00000374253 MRPL14Q6P1L8 145 aaKnown RBP14.31□□□□□ -0.12
CNKSR1-202ENST00000374253 TMEM205Q6UW68 189 aa14.31□□□□□ -0.12
CNKSR1-202ENST00000374253 MAMSTRQ6ZN01 415 aa14.31□□□□□ -0.12
CNKSR1-202ENST00000374253 MAML2Q8IZL2 1156 aaPredicted RBP14.31□□□□□ -0.12
CNKSR1-202ENST00000374253 RNF128Q8TEB7 428 aa14.31□□□□□ -0.12
CNKSR1-202ENST00000374253 PTRH2Q9Y3E5 179 aaKnown RBP14.31□□□□□ -0.12
CNKSR1-202ENST00000374253 TECTAO75443 2155 aa14.3□□□□□ -0.12
CNKSR1-202ENST00000374253 MEIS3P1A6NDR6 274 aa14.3□□□□□ -0.12
CNKSR1-202ENST00000374253 LIPT2A6NK58 231 aa14.3□□□□□ -0.12
CNKSR1-202ENST00000374253 GPR171O14626 319 aa14.3□□□□□ -0.12
CNKSR1-202ENST00000374253 PHYHO14832 338 aa14.3□□□□□ -0.12
CNKSR1-202ENST00000374253 RAMP1O60894 148 aa14.3□□□□□ -0.12
CNKSR1-202ENST00000374253 KHDRBS3O75525 346 aaKnown RBP14.3□□□□□ -0.12
CNKSR1-202ENST00000374253 YES1P07947 543 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms