RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 RHBDL2Q9NX52 303 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 OPTCQ9UBM4 332 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 OPN4Q9UHM6 478 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 HEMK1Q9Y5R4 338 aaPredicted RBP3.47□□□□□ -1.85
MCF2-203ENST00000370576 SERINC4A6NH21 518 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 ANKRD30BLA7E2S9 258 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 F8W036 122 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 SPRY2O43597 315 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 PCDH7O60245 1069 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 KHDRBS3O75525 346 aaKnown RBP3.47□□□□□ -1.85
MCF2-203ENST00000370576 SLC25A12O75746 678 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 SBK2P0C263 348 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 NCK1P16333 377 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 CYB561P49447 251 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 ZNF134P52741 427 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 DIO3P55073 304 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 DYNC1I2Q13409 638 aaKnown RBP3.47□□□□□ -1.85
MCF2-203ENST00000370576 NFYCQ13952 458 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 ZNF74Q16587 644 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 MEP1AQ16819 746 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 PAN3Q58A45 887 aaKnown RBP3.47□□□□□ -1.85
MCF2-203ENST00000370576 KDM4DQ6B0I6 523 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 ZNF793Q6ZN11 406 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 CACUL1Q86Y37 369 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 SPNS2Q8IVW8 549 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 UBQLNLQ8IYU4 475 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 LRRC17Q8N6Y2 441 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 PNPLA1Q8N8W4 532 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 OR5AU1Q8NGC0 362 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 OR52N2Q8NGI0 321 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 OR52E5Q8NH55 327 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 C16orf78Q8WTQ4 265 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 RORBQ92753 470 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 CDS1Q92903 461 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 RCN3Q96D15 328 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 MOCOSQ96EN8 888 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 SGTBQ96EQ0 304 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 SLC38A2Q96QD8 506 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 KXD1Q9BQD3 176 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 H2AFJQ9BTM1 129 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 HCAR1Q9BXC0 346 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 HDHD5Q9BXW7 423 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 MMP28Q9H239 520 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 SH2D2AQ9NP31 389 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 LYARQ9NX58 379 aaKnown RBP3.47□□□□□ -1.85
MCF2-203ENST00000370576 SEC14L3Q9UDX4 400 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 KLQ9UEF7 1012 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 DAPK2Q9UIK4 370 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 MKI67P46013 3256 aaKnown RBP3.47□□□□□ -1.85
MCF2-203ENST00000370576 GNG14A0A1W2PPG7 69 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 ATP6V1G2-DDX39BF2Z307 99 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 M0R296 226 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 FGF16O43320 207 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 ATP6AP2O75787 350 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 APOL3O95236 402 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 EML2O95834 649 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 IL18BPO95998 194 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 GASTP01350 101 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 IFNGP01579 166 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 PIRTP0C851 137 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 ITGA3P26006 1051 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 RBMS1P29558 406 aaKnown RBP3.46□□□□□ -1.86
MCF2-203ENST00000370576 CNR2P34972 360 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 ARR3P36575 388 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 CD79BP40259 229 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 VHLP40337 213 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 GRIA3P42263 894 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 GSK3BP49841 420 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 KPNB1Q14974 876 aaKnown RBP3.46□□□□□ -1.86
MCF2-203ENST00000370576 LY6G6FQ5SQ64 297 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 AGAP7PQ5VUJ5 663 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 C1orf146Q5VVC0 180 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 WDR25Q64LD2 544 aaPredicted RBP3.46□□□□□ -1.86
MCF2-203ENST00000370576 RNASEKQ6P5S7 137 aaKnown RBP3.46□□□□□ -1.86
MCF2-203ENST00000370576 CD164L2Q6UWJ8 174 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 CEACAM20Q6UY09 585 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 MBOAT1Q6ZNC8 495 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 MUC20Q8N307 709 aaPredicted RBP3.46□□□□□ -1.86
MCF2-203ENST00000370576 CLDN19Q8N6F1 224 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 ZNF485Q8NCK3 441 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 AGAP4Q96P64 663 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 GPR174Q9BXC1 333 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 REEP4Q9H6H4 257 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 RPF2Q9H7B2 306 aaKnown RBP3.46□□□□□ -1.86
MCF2-203ENST00000370576 SLAMF7Q9NQ25 335 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 BABAM2Q9NXR7 383 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 CD274Q9NZQ7 290 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 VAPAQ9P0L0 249 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 VPS29Q9UBQ0 182 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 KLHL21Q9UJP4 597 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 USP22Q9UPT9 525 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 A0A1W2PNV4 684 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 LMO7DNF2Z398 122 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 SCO2O43819 266 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 SEMA7AO75326 666 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 POP7O75817 140 aaKnown RBP3.46□□□□□ -1.86
MCF2-203ENST00000370576 ZBTB11O95625 1053 aaPredicted RBP3.46□□□□□ -1.86
MCF2-203ENST00000370576 CATP04040 527 aaKnown RBP3.46□□□□□ -1.86
MCF2-203ENST00000370576 ALPLP05186 524 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 SERPIND1P05546 499 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms