RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 NRGNQ92686 78 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 STMN2Q93045 179 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 CENPNQ96H22 339 aaPredicted RBP12.94□□□□□ -0.34
COL9A1-204ENST00000370496 NMNAT3Q96T66 252 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 SH3GL3Q99963 347 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 TMEM204Q9BSN7 226 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 SEMA6AQ9H2E6 1030 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 KCNN2Q9H2S1 579 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 PAPOLBQ9NRJ5 636 aaKnown RBP12.94□□□□□ -0.34
COL9A1-204ENST00000370496 VSX1Q9NZR4 365 aaPredicted RBP12.94□□□□□ -0.34
COL9A1-204ENST00000370496 BAIAP2Q9UQB8 552 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 UGT2A1Q9Y4X1 527 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 IGHV1-18A0A0C4DH31 117 aa12.93□□□□□ -0.34
COL9A1-204ENST00000370496 ERICH4A6NGS2 130 aa12.93□□□□□ -0.34
COL9A1-204ENST00000370496 SAC3D1A6NKF1 404 aa12.93□□□□□ -0.34
COL9A1-204ENST00000370496 PLAUP00749 431 aa12.93□□□□□ -0.34
COL9A1-204ENST00000370496 IFNGP01579 166 aa12.93□□□□□ -0.34
COL9A1-204ENST00000370496 IGKV3-15P01624 115 aa12.93□□□□□ -0.34
COL9A1-204ENST00000370496 CECR9P0C854 216 aa12.93□□□□□ -0.34
COL9A1-204ENST00000370496 CBR1P16152 277 aa12.93□□□□□ -0.34
COL9A1-204ENST00000370496 CRABP1P29762 137 aa12.93□□□□□ -0.34
COL9A1-204ENST00000370496 CDKN2AP42771 156 aaKnown RBP12.93□□□□□ -0.34
COL9A1-204ENST00000370496 GIPRP48546 466 aa12.93□□□□□ -0.34
COL9A1-204ENST00000370496 CENPAP49450 140 aa12.93□□□□□ -0.34
COL9A1-204ENST00000370496 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.93□□□□□ -0.34
COL9A1-204ENST00000370496 PGGHGQ32M88 737 aa12.93□□□□□ -0.34
COL9A1-204ENST00000370496 TMEM53Q6P2H8 277 aa12.93□□□□□ -0.34
COL9A1-204ENST00000370496 PAMR1Q6UXH9 720 aa12.93□□□□□ -0.34
COL9A1-204ENST00000370496 DPPA2Q7Z7J5 298 aa12.93□□□□□ -0.34
COL9A1-204ENST00000370496 IQCF1Q8N6M8 205 aa12.93□□□□□ -0.34
COL9A1-204ENST00000370496 ICA1LQ8NDH6 482 aa12.93□□□□□ -0.34
COL9A1-204ENST00000370496 OR52E2Q8NGJ4 325 aa12.93□□□□□ -0.34
COL9A1-204ENST00000370496 AKAP1Q92667 903 aaKnown RBP eCLIP12.93□□□□□ -0.34
COL9A1-204ENST00000370496 RADILQ96JH8 1075 aa12.93□□□□□ -0.34
COL9A1-204ENST00000370496 SNX18Q96RF0 628 aa12.93□□□□□ -0.34
COL9A1-204ENST00000370496 GABARAPL1Q9H0R8 117 aa12.93□□□□□ -0.34
COL9A1-204ENST00000370496 RNF121Q9H920 327 aa12.93□□□□□ -0.34
COL9A1-204ENST00000370496 SIAEQ9HAT2 523 aa12.93□□□□□ -0.34
COL9A1-204ENST00000370496 NOX3Q9HBY0 568 aa12.93□□□□□ -0.34
COL9A1-204ENST00000370496 CCNB1IP1Q9NPC3 277 aa12.93□□□□□ -0.34
COL9A1-204ENST00000370496 RPRD1BQ9NQG5 326 aaKnown RBP12.93□□□□□ -0.34
COL9A1-204ENST00000370496 KRT84Q9NSB2 600 aa12.93□□□□□ -0.34
COL9A1-204ENST00000370496 ZNF224Q9NZL3 707 aa12.93□□□□□ -0.34
COL9A1-204ENST00000370496 CRNNQ9UBG3 495 aaPredicted RBP12.93□□□□□ -0.34
COL9A1-204ENST00000370496 FBXL3Q9UKT7 428 aa12.93□□□□□ -0.34
COL9A1-204ENST00000370496 OAZ3Q9UMX2 235 aa12.93□□□□□ -0.34
COL9A1-204ENST00000370496 EDARQ9UNE0 448 aa12.93□□□□□ -0.34
COL9A1-204ENST00000370496 ABCA4P78363 2273 aa12.92□□□□□ -0.34
COL9A1-204ENST00000370496 ANKRD17O75179 2603 aaKnown RBP12.92□□□□□ -0.34
COL9A1-204ENST00000370496 ITPR2Q14571 2701 aa12.92□□□□□ -0.34
COL9A1-204ENST00000370496 RIIAD1A6NNX1 92 aa12.92□□□□□ -0.34
COL9A1-204ENST00000370496 ATP6V1G2-DDX39BF2Z307 99 aa12.92□□□□□ -0.34
COL9A1-204ENST00000370496 H3BNX3 289 aa12.92□□□□□ -0.34
COL9A1-204ENST00000370496 KHDRBS3O75525 346 aaKnown RBP12.92□□□□□ -0.34
COL9A1-204ENST00000370496 IGLV1-44P01699 117 aa12.92□□□□□ -0.34
COL9A1-204ENST00000370496 CRYAAP02489 173 aa12.92□□□□□ -0.34
COL9A1-204ENST00000370496 TP53P04637 393 aaPredicted RBP12.92□□□□□ -0.34
COL9A1-204ENST00000370496 CELA3BP08861 270 aa12.92□□□□□ -0.34
COL9A1-204ENST00000370496 PATE4P0C8F1 98 aa12.92□□□□□ -0.34
COL9A1-204ENST00000370496 OSMP13725 252 aa12.92□□□□□ -0.34
COL9A1-204ENST00000370496 ZNF3P17036 446 aa12.92□□□□□ -0.34
COL9A1-204ENST00000370496 MSR1P21757 451 aa12.92□□□□□ -0.34
COL9A1-204ENST00000370496 RAB1AP62820 205 aa12.92□□□□□ -0.34
COL9A1-204ENST00000370496 C3orf36Q3SXR2 165 aa12.92□□□□□ -0.34
COL9A1-204ENST00000370496 SLC27A4Q6P1M0 643 aa12.92□□□□□ -0.34
COL9A1-204ENST00000370496 FAHD1Q6P587 224 aa12.92□□□□□ -0.34
COL9A1-204ENST00000370496 GLB1L2Q8IW92 636 aa12.92□□□□□ -0.34
COL9A1-204ENST00000370496 LNX2Q8N448 690 aa12.92□□□□□ -0.34
COL9A1-204ENST00000370496 FAM169BQ8N8A8 192 aa12.92□□□□□ -0.34
COL9A1-204ENST00000370496 OR4Q3Q8NH05 313 aa12.92□□□□□ -0.34
COL9A1-204ENST00000370496 FBXW5Q969U6 566 aa12.92□□□□□ -0.34
COL9A1-204ENST00000370496 NABP1Q96AH0 204 aa12.92□□□□□ -0.34
COL9A1-204ENST00000370496 FOXN4Q96NZ1 517 aa12.92□□□□□ -0.34
COL9A1-204ENST00000370496 PKP2Q99959 881 aa12.92□□□□□ -0.34
COL9A1-204ENST00000370496 NUAK2Q9H093 628 aa12.92□□□□□ -0.34
COL9A1-204ENST00000370496 FN3KQ9H479 309 aa12.92□□□□□ -0.34
COL9A1-204ENST00000370496 PLEKHF2Q9H8W4 249 aa12.92□□□□□ -0.34
COL9A1-204ENST00000370496 REV1Q9UBZ9 1251 aa12.92□□□□□ -0.34
COL9A1-204ENST00000370496 KLHL21Q9UJP4 597 aa12.92□□□□□ -0.34
COL9A1-204ENST00000370496 RAI1Q7Z5J4 1906 aaPredicted RBP12.92□□□□□ -0.34
COL9A1-204ENST00000370496 CSMD2Q7Z408 3487 aa12.91□□□□□ -0.34
COL9A1-204ENST00000370496 HS3ST1O14792 307 aa12.91□□□□□ -0.34
COL9A1-204ENST00000370496 MGRN1O60291 552 aa12.91□□□□□ -0.34
COL9A1-204ENST00000370496 LAP3P28838 519 aa12.91□□□□□ -0.34
COL9A1-204ENST00000370496 HSF2Q03933 536 aa12.91□□□□□ -0.34
COL9A1-204ENST00000370496 ETFDHQ16134 617 aa12.91□□□□□ -0.34
COL9A1-204ENST00000370496 ZNF672Q499Z4 452 aaPredicted RBP12.91□□□□□ -0.34
COL9A1-204ENST00000370496 C20orf204Q6ZNR8 217 aa12.91□□□□□ -0.34
COL9A1-204ENST00000370496 FOXL2NBQ6ZUU3 175 aa12.91□□□□□ -0.34
COL9A1-204ENST00000370496 MYPOPQ86VE0 399 aaPredicted RBP12.91□□□□□ -0.34
COL9A1-204ENST00000370496 CYB561A3Q8NBI2 242 aa12.91□□□□□ -0.34
COL9A1-204ENST00000370496 MS4A3Q96HJ5 214 aa12.91□□□□□ -0.34
COL9A1-204ENST00000370496 TSSK2Q96PF2 358 aa12.91□□□□□ -0.34
COL9A1-204ENST00000370496 TEX12Q9BXU0 123 aa12.91□□□□□ -0.34
COL9A1-204ENST00000370496 S100A14Q9HCY8 104 aa12.91□□□□□ -0.34
COL9A1-204ENST00000370496 EMC7Q9NPA0 242 aa12.91□□□□□ -0.34
COL9A1-204ENST00000370496 POLE4Q9NR33 117 aa12.91□□□□□ -0.34
COL9A1-204ENST00000370496 B3GNT2Q9NY97 397 aa12.91□□□□□ -0.34
COL9A1-204ENST00000370496 MOKQ9UQ07 419 aa12.91□□□□□ -0.34
COL9A1-204ENST00000370496 PLEKHA6Q9Y2H5 1048 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms