RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 KCTD11Q693B1 232 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 FAM3DQ96BQ1 224 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 SLC25A21Q9BQT8 299 aaPredicted RBP11.5□□□□□ -0.57
HCFC1-202ENST00000369984 HEYLQ9NQ87 328 aaPredicted RBP11.5□□□□□ -0.57
HCFC1-202ENST00000369984 BCAT2O15382 392 aaPredicted RBP11.5□□□□□ -0.57
HCFC1-202ENST00000369984 PVRP15151 417 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 OR1D4P47884 311 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 KRTDAPP60985 99 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 GNB1P62873 340 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 LINC00346Q8IVM7 164 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 EMG1Q92979 244 aaKnown RBP11.5□□□□□ -0.57
HCFC1-202ENST00000369984 SLC35B4Q969S0 331 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 CALHM2Q9HA72 323 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 CHRNA9Q9UGM1 479 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 POLR2AP24928 1970 aaKnown RBP11.5□□□□□ -0.57
HCFC1-202ENST00000369984 P2RY10O00398 339 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 PPP6CO00743 305 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 SRP9P49458 86 aaKnown RBP11.5□□□□□ -0.57
HCFC1-202ENST00000369984 LGALS4P56470 323 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 PXDC1Q5TGL8 231 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 LYRM7Q5U5X0 104 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 Q6ZRG5 221 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 LRRTM3Q86VH5 581 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 LMNTD1Q8N9Z9 388 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 TMEM104Q8NE00 496 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 NMNAT3Q96T66 252 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 SEC22CQ9BRL7 303 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 ZNF586Q9NXT0 402 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 ELAVL4P26378 380 aaKnown RBP11.5□□□□□ -0.57
HCFC1-202ENST00000369984 SSR4P51571 173 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 MAT1AQ00266 395 aaKnown RBP11.5□□□□□ -0.57
HCFC1-202ENST00000369984 IAH1Q2TAA2 248 aaPredicted RBP11.5□□□□□ -0.57
HCFC1-202ENST00000369984 FAM162BQ5T6X4 162 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 WDR74Q6RFH5 385 aaPredicted RBP11.5□□□□□ -0.57
HCFC1-202ENST00000369984 AKR7LQ8NHP1 331 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 ACOXLQ9NUZ1 547 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 LRIT1Q9P2V4 623 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 NXT1Q9UKK6 140 aaKnown RBP11.5□□□□□ -0.57
HCFC1-202ENST00000369984 RALYQ9UKM9 306 aaKnown RBP11.5□□□□□ -0.57
HCFC1-202ENST00000369984 HRH3Q9Y5N1 445 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 TMEM221A6NGB7 291 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 DCTN6O00399 190 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 RPA2P15927 270 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 DUSP1P28562 367 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 KIAA1024LP59773 190 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 SYT9Q86SS6 491 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 PPP1R3BQ86XI6 285 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 MISPQ8IVT2 679 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 SOX7Q9BT81 388 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 KLK4Q9Y5K2 254 aa11.5□□□□□ -0.57
HCFC1-202ENST00000369984 SCN9AQ15858 1988 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 SPINT2O43291 252 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 TBPL2Q6SJ96 375 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 DPY19L2P2Q6ZN68 376 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 MFSD9Q8NBP5 474 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 HSD17B11Q8NBQ5 300 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 DEGS1O15121 323 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 BMPR1AP36894 532 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 EDDM3BP56851 147 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.49□□□□□ -0.57
HCFC1-202ENST00000369984 PRAMEF20Q5VT98 475 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 TJP1Q07157 1748 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 LRRC30A6NM36 301 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 TMX2-CTNND1H3BSU7 103 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 P2RX3P56373 397 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 C17orf67Q0P5P2 114 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 OR5M8Q8NGP6 311 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 GPR78Q96P69 363 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 SEMA4CQ9C0C4 833 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 SLC22A11Q9NSA0 550 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 SSSCA1O60232 199 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 NME2P1O60361 137 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 UTS2O95399 124 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 GABREP78334 506 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 HNRNPA1L2Q32P51 320 aaKnown RBP11.49□□□□□ -0.57
HCFC1-202ENST00000369984 LYSMD4Q5XG99 296 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 H3F3CQ6NXT2 135 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 RHOUQ7L0Q8 258 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 SCARB1Q8WTV0 552 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 KIRREL1Q96J84 757 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 TNFRSF13CQ96RJ3 184 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 GAR1Q9NY12 217 aaKnown RBP11.49□□□□□ -0.57
HCFC1-202ENST00000369984 SPHK1Q9NYA1 384 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 CD207Q9UJ71 328 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 CSAG2Q9Y5P2 127 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 ABHD16AO95870 558 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 PDGFAP04085 211 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 CLLU1OSQ5K130 101 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 DCAF12Q5T6F0 453 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 TMEM255BQ8WV15 326 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 LMAN1LQ9HAT1 526 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 C7orf72A4D263 438 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 BMPR1BO00238 502 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 PTGESO14684 152 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 LALBAP00709 142 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 SLC5A2P31639 672 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 SLC39A5Q6ZMH5 540 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 FAM122BQ7Z309 247 aa11.49□□□□□ -0.57
HCFC1-202ENST00000369984 MRPL10Q7Z7H8 261 aaKnown RBP11.49□□□□□ -0.57
HCFC1-202ENST00000369984 C19orf47Q8N9M1 422 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 580 ms