RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 WWTR1Q9GZV5 400 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 ALX4Q9H161 411 aaPredicted RBP12.89□□□□□ -0.35
CD48-201ENST00000368045 SCPEP1Q9HB40 452 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 MED9Q9NWA0 146 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 COPS7AQ9UBW8 275 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 DHDHQ9UQ10 334 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 TMED7Q9Y3B3 224 aa12.89□□□□□ -0.35
CD48-201ENST00000368045 TRAV18A0A075B6X5 111 aa12.88□□□□□ -0.35
CD48-201ENST00000368045 A0A0A6YYH2 397 aa12.88□□□□□ -0.35
CD48-201ENST00000368045 MEGF11A6BM72 1044 aa12.88□□□□□ -0.35
CD48-201ENST00000368045 A6NJ64 397 aa12.88□□□□□ -0.35
CD48-201ENST00000368045 C11orf98E9PRG8 122 aa12.88□□□□□ -0.35
CD48-201ENST00000368045 I3L521 148 aa12.88□□□□□ -0.35
CD48-201ENST00000368045 OR2T1O43869 369 aa12.88□□□□□ -0.35
CD48-201ENST00000368045 SUSD5O60279 629 aa12.88□□□□□ -0.35
CD48-201ENST00000368045 SLC16A7O60669 478 aa12.88□□□□□ -0.35
CD48-201ENST00000368045 CXCL2P19875 107 aa12.88□□□□□ -0.35
CD48-201ENST00000368045 CD38P28907 300 aa12.88□□□□□ -0.35
CD48-201ENST00000368045 RPS27P42677 84 aaKnown RBP12.88□□□□□ -0.35
CD48-201ENST00000368045 NR0B1P51843 470 aaKnown RBP12.88□□□□□ -0.35
CD48-201ENST00000368045 TOMM34Q15785 309 aaPredicted RBP12.88□□□□□ -0.35
CD48-201ENST00000368045 AANATQ16613 207 aa12.88□□□□□ -0.35
CD48-201ENST00000368045 C2orf76Q3KRA6 126 aa12.88□□□□□ -0.35
CD48-201ENST00000368045 C1orf140Q5VVS0 124 aa12.88□□□□□ -0.35
CD48-201ENST00000368045 B3GNTL1Q67FW5 361 aaPredicted RBP12.88□□□□□ -0.35
CD48-201ENST00000368045 Q6ZS52 159 aa12.88□□□□□ -0.35
CD48-201ENST00000368045 SLC29A4Q7RTT9 530 aa12.88□□□□□ -0.35
CD48-201ENST00000368045 GRINAQ7Z429 371 aa12.88□□□□□ -0.35
CD48-201ENST00000368045 CATSPERDQ86XM0 798 aa12.88□□□□□ -0.35
CD48-201ENST00000368045 ADGRG3Q86Y34 549 aa12.88□□□□□ -0.35
CD48-201ENST00000368045 CDH26Q8IXH8 852 aa12.88□□□□□ -0.35
CD48-201ENST00000368045 GPX8Q8TED1 209 aa12.88□□□□□ -0.35
CD48-201ENST00000368045 OMA1Q96E52 524 aa12.88□□□□□ -0.35
CD48-201ENST00000368045 SFXN2Q96NB2 322 aa12.88□□□□□ -0.35
CD48-201ENST00000368045 ULBP3Q9BZM4 244 aa12.88□□□□□ -0.35
CD48-201ENST00000368045 SLCO5A1Q9H2Y9 848 aa12.88□□□□□ -0.35
CD48-201ENST00000368045 UPB1Q9UBR1 384 aa12.88□□□□□ -0.35
CD48-201ENST00000368045 KCNN3Q9UGI6 736 aa12.88□□□□□ -0.35
CD48-201ENST00000368045 ZNF107Q9UII5 783 aaPredicted RBP12.88□□□□□ -0.35
CD48-201ENST00000368045 PPIEQ9UNP9 301 aaKnown RBP12.88□□□□□ -0.35
CD48-201ENST00000368045 IGHV1OR15-9A0A0B4J2B8 117 aa12.87□□□□□ -0.35
CD48-201ENST00000368045 SLC22A23A1A5C7 686 aa12.87□□□□□ -0.35
CD48-201ENST00000368045 A6NIZ1 184 aa12.87□□□□□ -0.35
CD48-201ENST00000368045 ZSCAN5BA6NJL1 495 aa12.87□□□□□ -0.35
CD48-201ENST00000368045 LMO7DNF2Z398 122 aa12.87□□□□□ -0.35
CD48-201ENST00000368045 PLPP3O14495 311 aa12.87□□□□□ -0.35
CD48-201ENST00000368045 NUDT14O95848 222 aa12.87□□□□□ -0.35
CD48-201ENST00000368045 GPANK1O95872 356 aa12.87□□□□□ -0.35
CD48-201ENST00000368045 WNT11O96014 354 aa12.87□□□□□ -0.35
CD48-201ENST00000368045 ITGA5P08648 1049 aa12.87□□□□□ -0.35
CD48-201ENST00000368045 SPARCP09486 303 aa12.87□□□□□ -0.35
CD48-201ENST00000368045 GTF2F2P13984 249 aa12.87□□□□□ -0.35
CD48-201ENST00000368045 FBLP22087 321 aaKnown RBP12.87□□□□□ -0.35
CD48-201ENST00000368045 MAOBP27338 520 aa12.87□□□□□ -0.35
CD48-201ENST00000368045 OR1D4P47884 311 aa12.87□□□□□ -0.35
CD48-201ENST00000368045 EFNB2P52799 333 aa12.87□□□□□ -0.35
CD48-201ENST00000368045 CAPZA1P52907 286 aa12.87□□□□□ -0.35
CD48-201ENST00000368045 RAP1BP61224 184 aa12.87□□□□□ -0.35
CD48-201ENST00000368045 SEC61A1P61619 476 aaKnown RBP12.87□□□□□ -0.35
CD48-201ENST00000368045 RAP1AP62834 184 aa12.87□□□□□ -0.35
CD48-201ENST00000368045 HSD11B2P80365 405 aa12.87□□□□□ -0.35
CD48-201ENST00000368045 INSM1Q01101 510 aaPredicted RBP12.87□□□□□ -0.35
CD48-201ENST00000368045 CSRP2Q16527 193 aa12.87□□□□□ -0.35
CD48-201ENST00000368045 C14orf28Q4W4Y0 310 aa12.87□□□□□ -0.35
CD48-201ENST00000368045 NHLRC3Q5JS37 347 aa12.87□□□□□ -0.35
CD48-201ENST00000368045 TMEM225Q6GV28 225 aa12.87□□□□□ -0.35
CD48-201ENST00000368045 MISPQ8IVT2 679 aa12.87□□□□□ -0.35
CD48-201ENST00000368045 ZNF441Q8N8Z8 693 aa12.87□□□□□ -0.35
CD48-201ENST00000368045 CLEC1AQ8NC01 280 aa12.87□□□□□ -0.35
CD48-201ENST00000368045 TSTD1Q8NFU3 115 aa12.87□□□□□ -0.35
CD48-201ENST00000368045 CCDC107Q8WV48 283 aa12.87□□□□□ -0.35
CD48-201ENST00000368045 SLC25A36Q96CQ1 311 aa12.87□□□□□ -0.35
CD48-201ENST00000368045 APMAPQ9HDC9 416 aa12.87□□□□□ -0.35
CD48-201ENST00000368045 MRPL22Q9NWU5 206 aaKnown RBP12.87□□□□□ -0.35
CD48-201ENST00000368045 OPN4Q9UHM6 478 aa12.87□□□□□ -0.35
CD48-201ENST00000368045 C5orf42Q9H799 3197 aa12.87□□□□□ -0.35
CD48-201ENST00000368045 RHPN2P1A8MT19 583 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 C2CD4DB7Z1M9 353 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 FADS1O60427 444 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 B3GALNT1O75752 331 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 AHSA1O95433 338 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 IGFBP3P17936 291 aaPredicted RBP12.86□□□□□ -0.35
CD48-201ENST00000368045 GLO1Q04760 184 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 C1QL3Q5VWW1 255 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 OR5M10Q6IEU7 315 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 STEAP1BQ6NZ63 245 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 CHRDL2Q6WN34 429 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 SLC35D2Q76EJ3 337 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 KANSL1Q7Z3B3 1105 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 TMEM229BQ8NBD8 167 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 OR2AK2Q8NG84 335 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 OR6M1Q8NGM8 313 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 OR1N1Q8NGS0 311 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 GPR119Q8TDV5 335 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 ATOH1Q92858 354 aaPredicted RBP12.86□□□□□ -0.35
CD48-201ENST00000368045 SLC25A28Q96A46 364 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 ZNF587Q96SQ5 575 aaPredicted RBP12.86□□□□□ -0.35
CD48-201ENST00000368045 SEMA4CQ9C0C4 833 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 PCED1AQ9H1Q7 454 aa12.86□□□□□ -0.35
CD48-201ENST00000368045 C1orf198Q9H425 327 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms