RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 GPR176Q14439 515 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 C3orf33Q6P1S2 294 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 TMEM81Q6P7N7 255 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 DEGS2Q6QHC5 323 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 KRT77Q7Z794 578 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 ZNF433Q8N7K0 673 aaPredicted RBP12.59□□□□□ -0.39
USF1-202ENST00000368020 OR5H6Q8NGV6 325 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 THAP3Q8WTV1 239 aaPredicted RBP12.59□□□□□ -0.39
USF1-202ENST00000368020 DEDD2Q8WXF8 326 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 ASB10Q8WXI3 467 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 SPACA9Q96E40 222 aaPredicted RBP12.59□□□□□ -0.39
USF1-202ENST00000368020 ZNF486Q96H40 463 aaPredicted RBP12.59□□□□□ -0.39
USF1-202ENST00000368020 CMKLR1Q99788 373 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 CTRCQ99895 268 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 OR11A1Q9GZK7 315 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 PTGES2Q9H7Z7 377 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 DDX28Q9NUL7 540 aaKnown RBP12.59□□□□□ -0.39
USF1-202ENST00000368020 KCNG2Q9UJ96 466 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 NUBP2Q9Y5Y2 271 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 INMT-MINDY4F8WBC2 141 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 CEACAM1P13688 526 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 ZNF823P16415 610 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 HSF1Q00613 529 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 MADCAM1Q13477 382 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 OR7A5Q15622 319 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 MEP1BQ16820 701 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 NCCRP1Q6ZVX7 275 aaPredicted RBP12.59□□□□□ -0.39
USF1-202ENST00000368020 KRT74Q7RTS7 529 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 ZNF227Q86WZ6 799 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 TCTE3Q8IZS6 198 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 UBE2J2Q8N2K1 259 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 ELP5Q8TE02 316 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 YIPF5Q969M3 257 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 ACTR6Q9GZN1 396 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 TSPAN10Q9H1Z9 355 aaPredicted RBP12.59□□□□□ -0.39
USF1-202ENST00000368020 LIN7BQ9HAP6 207 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 ELOVL3Q9HB03 270 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 PLEKHA1Q9HB21 404 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 ING3Q9NXR8 418 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 SLCO1C1Q9NYB5 712 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 MED11Q9P086 117 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 RPH3AQ9Y2J0 694 aaPredicted RBP12.59□□□□□ -0.39
USF1-202ENST00000368020 B3GALT1Q9Y5Z6 326 aa12.59□□□□□ -0.39
USF1-202ENST00000368020 KIF26BQ2KJY2 2108 aa12.58□□□□□ -0.4
USF1-202ENST00000368020 NAP1L6A6NFF2 107 aa12.58□□□□□ -0.4
USF1-202ENST00000368020 LIPT2A6NK58 231 aa12.58□□□□□ -0.4
USF1-202ENST00000368020 C17orf51A8MQB3 221 aa12.58□□□□□ -0.4
USF1-202ENST00000368020 ATP6V1G1O75348 118 aa12.58□□□□□ -0.4
USF1-202ENST00000368020 CD2P06729 351 aa12.58□□□□□ -0.4
USF1-202ENST00000368020 SPARCP09486 303 aa12.58□□□□□ -0.4
USF1-202ENST00000368020 TFPIP10646 304 aa12.58□□□□□ -0.4
USF1-202ENST00000368020 CTLA4P16410 223 aa12.58□□□□□ -0.4
USF1-202ENST00000368020 DPP4P27487 766 aa12.58□□□□□ -0.4
USF1-202ENST00000368020 ART1P52961 327 aa12.58□□□□□ -0.4
USF1-202ENST00000368020 FOXF1Q12946 379 aa12.58□□□□□ -0.4
USF1-202ENST00000368020 PLPPR5Q32ZL2 321 aa12.58□□□□□ -0.4
USF1-202ENST00000368020 PLA1AQ53H76 456 aa12.58□□□□□ -0.4
USF1-202ENST00000368020 FAM69BQ5VUD6 431 aa12.58□□□□□ -0.4
USF1-202ENST00000368020 LYPD8Q6UX82 237 aa12.58□□□□□ -0.4
USF1-202ENST00000368020 DEFB124Q8NES8 71 aa12.58□□□□□ -0.4
USF1-202ENST00000368020 OR52N5Q8NH56 324 aa12.58□□□□□ -0.4
USF1-202ENST00000368020 HSD17B8Q92506 261 aa12.58□□□□□ -0.4
USF1-202ENST00000368020 TMEM106AQ96A25 262 aa12.58□□□□□ -0.4
USF1-202ENST00000368020 MIB2Q96AX9 1013 aa12.58□□□□□ -0.4
USF1-202ENST00000368020 UPRTQ96BW1 309 aa12.58□□□□□ -0.4
USF1-202ENST00000368020 C5orf34Q96MH7 638 aa12.58□□□□□ -0.4
USF1-202ENST00000368020 CCDC86Q9H6F5 360 aaKnown RBP12.58□□□□□ -0.4
USF1-202ENST00000368020 GALNT9Q9HCQ5 603 aa12.58□□□□□ -0.4
USF1-202ENST00000368020 OCIAD1Q9NX40 245 aa12.58□□□□□ -0.4
USF1-202ENST00000368020 KLHL9Q9P2J3 617 aa12.58□□□□□ -0.4
USF1-202ENST00000368020 CKLFQ9UBR5 152 aa12.58□□□□□ -0.4
USF1-202ENST00000368020 A0A087WZY1 265 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 MS4A18H0YCH9 400 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 GABARAPH6UMI1 98 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 GFRA3O60609 400 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 KHDRBS3O75525 346 aaKnown RBP12.57□□□□□ -0.4
USF1-202ENST00000368020 OR2J2O76002 312 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 YES1P07947 543 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 GSTT2BP0CG30 244 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 ARSBP15848 533 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 PTGS2P35354 604 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 CAPZA1P52907 286 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 GPR85P60893 370 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 MC2RQ01718 297 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 EIF2B1Q14232 305 aaKnown RBP12.57□□□□□ -0.4
USF1-202ENST00000368020 NDUFA5Q16718 116 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 PCK2Q16822 640 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 MS4A18Q3C1V0 323 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 OR5M10Q6IEU7 315 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 FAM199XQ6PEV8 388 aaPredicted RBP12.57□□□□□ -0.4
USF1-202ENST00000368020 OPN5Q6U736 354 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 ASB18Q6ZVZ8 466 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 SLC35D2Q76EJ3 337 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 TSEN15Q8WW01 171 aaKnown RBP12.57□□□□□ -0.4
USF1-202ENST00000368020 AKAP1Q92667 903 aaKnown RBP eCLIP12.57□□□□□ -0.4
USF1-202ENST00000368020 MCHR2Q969V1 340 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 ZBTB8AQ96BR9 441 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 C8orf44Q96CB5 159 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 RASL10BQ96S79 203 aa12.57□□□□□ -0.4
USF1-202ENST00000368020 KCNK17Q96T54 332 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms