RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 SELENOPP49908 381 aa8.41□□□□□ -1.06
VTA1-201ENST00000367621 UCNP55089 124 aa8.41□□□□□ -1.06
VTA1-201ENST00000367621 WNT4P56705 351 aa8.41□□□□□ -1.06
VTA1-201ENST00000367621 ACSM1Q08AH1 577 aa8.41□□□□□ -1.06
VTA1-201ENST00000367621 PCK2Q16822 640 aa8.41□□□□□ -1.06
VTA1-201ENST00000367621 THEM4Q5T1C6 240 aa8.41□□□□□ -1.06
VTA1-201ENST00000367621 PDSS1Q5T2R2 415 aa8.41□□□□□ -1.06
VTA1-201ENST00000367621 CARD17Q5XLA6 110 aa8.41□□□□□ -1.06
VTA1-201ENST00000367621 LRRC69Q6ZNQ3 347 aa8.41□□□□□ -1.06
VTA1-201ENST00000367621 CLVS1Q8IUQ0 354 aaPredicted RBP8.41□□□□□ -1.06
VTA1-201ENST00000367621 C20orf196Q8IYI0 205 aa8.41□□□□□ -1.06
VTA1-201ENST00000367621 SLC26A10Q8NG04 563 aa8.41□□□□□ -1.06
VTA1-201ENST00000367621 OR6K6Q8NGW6 343 aa8.41□□□□□ -1.06
VTA1-201ENST00000367621 OR2T27Q8NH04 317 aa8.41□□□□□ -1.06
VTA1-201ENST00000367621 RNF128Q8TEB7 428 aa8.41□□□□□ -1.06
VTA1-201ENST00000367621 ABHD3Q8WU67 409 aa8.41□□□□□ -1.06
VTA1-201ENST00000367621 GATAD2BQ8WXI9 593 aa8.41□□□□□ -1.06
VTA1-201ENST00000367621 ZHX1-C8orf76Q96EF9 292 aa8.41□□□□□ -1.06
VTA1-201ENST00000367621 FOXN4Q96NZ1 517 aa8.41□□□□□ -1.06
VTA1-201ENST00000367621 TBX5Q99593 518 aa8.41□□□□□ -1.06
VTA1-201ENST00000367621 MGLLQ99685 303 aa8.41□□□□□ -1.06
VTA1-201ENST00000367621 PRDM14Q9GZV8 571 aa8.41□□□□□ -1.06
VTA1-201ENST00000367621 ISYNA1Q9NPH2 558 aa8.41□□□□□ -1.06
VTA1-201ENST00000367621 TIGARQ9NQ88 270 aa8.41□□□□□ -1.06
VTA1-201ENST00000367621 B3GNT3Q9Y2A9 372 aa8.41□□□□□ -1.06
VTA1-201ENST00000367621 TP53TG5Q9Y2B4 290 aa8.41□□□□□ -1.06
VTA1-201ENST00000367621 CAB39Q9Y376 341 aaPredicted RBP8.41□□□□□ -1.06
VTA1-201ENST00000367621 SIRT4Q9Y6E7 314 aaPredicted RBP8.41□□□□□ -1.06
VTA1-201ENST00000367621 CACNA1GO43497 2377 aa8.41□□□□□ -1.06
VTA1-201ENST00000367621 ACACAQ13085 2346 aa8.41□□□□□ -1.06
VTA1-201ENST00000367621 URB1O60287 2271 aaKnown RBP8.41□□□□□ -1.06
VTA1-201ENST00000367621 ALPK2Q86TB3 2170 aa8.41□□□□□ -1.06
VTA1-201ENST00000367621 MED19A0JLT2 244 aaPredicted RBP8.4□□□□□ -1.06
VTA1-201ENST00000367621 DAPL1A0PJW8 107 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 E9PI62 339 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 NPIPA2E9PIF3 369 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 NPIPA3F8WFD2 350 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 ZNF701M0R085 212 aaPredicted RBP8.4□□□□□ -1.06
VTA1-201ENST00000367621 AQP7O14520 342 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 MAGEB4O15481 346 aaPredicted RBP8.4□□□□□ -1.06
VTA1-201ENST00000367621 KHDRBS3O75525 346 aaKnown RBP8.4□□□□□ -1.06
VTA1-201ENST00000367621 MYL12AP19105 171 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 ALOX5APP20292 161 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 EDNRAP25101 427 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 RGS6P49758 472 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 OR12D2P58182 307 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 RASGEF1BQ0VAM2 473 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 MLLT11Q13015 90 aaPredicted RBP8.4□□□□□ -1.06
VTA1-201ENST00000367621 AQP6Q13520 282 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 TPBGQ13641 420 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 MED22Q15528 200 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 CTF1Q16619 201 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 TSTQ16762 297 aaKnown RBP8.4□□□□□ -1.06
VTA1-201ENST00000367621 MEP1BQ16820 701 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 CNPY1Q3B7I2 92 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 CDONQ4KMG0 1287 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 ARSJQ5FYB0 599 aaPredicted RBP8.4□□□□□ -1.06
VTA1-201ENST00000367621 TEX30Q5JUR7 227 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 ZNF324BQ6AW86 544 aaPredicted RBP8.4□□□□□ -1.06
VTA1-201ENST00000367621 UNQ6494/PRO21346Q6UXR6 183 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 LINGO2Q7L985 606 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 ANKRD13BQ86YJ7 626 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 KLHL36Q8N4N3 616 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 Q8NA96 180 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 FNDC9Q8TBE3 224 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 SPRYD4Q8WW59 207 aaPredicted RBP8.4□□□□□ -1.06
VTA1-201ENST00000367621 MCHR2Q969V1 340 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 TMEM45BQ96B21 275 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 ISOC1Q96CN7 298 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 RBP7Q96R05 134 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 AMELYQ99218 206 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 ALG8Q9BVK2 526 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 YIPF3Q9GZM5 350 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 RERGLQ9H628 205 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 LDAHQ9H6V9 325 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 CHCHD3Q9NX63 227 aaKnown RBP8.4□□□□□ -1.06
VTA1-201ENST00000367621 BABAM2Q9NXR7 383 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 KLHL9Q9P2J3 617 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 ENPP5Q9UJA9 477 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 RCE1Q9Y256 329 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 MPDZO75970 2070 aa8.4□□□□□ -1.06
VTA1-201ENST00000367621 ZNF726A6NNF4 738 aa8.39□□□□□ -1.07
VTA1-201ENST00000367621 H3BMQ9 156 aa8.39□□□□□ -1.07
VTA1-201ENST00000367621 ZNF593O00488 134 aaPredicted RBP8.39□□□□□ -1.07
VTA1-201ENST00000367621 MYL12BO14950 172 aa8.39□□□□□ -1.07
VTA1-201ENST00000367621 LRRTM2O43300 516 aa8.39□□□□□ -1.07
VTA1-201ENST00000367621 GABARAPO95166 117 aa8.39□□□□□ -1.07
VTA1-201ENST00000367621 ATE1O95260 518 aa8.39□□□□□ -1.07
VTA1-201ENST00000367621 ABHD16AO95870 558 aa8.39□□□□□ -1.07
VTA1-201ENST00000367621 TGM6O95932 706 aa8.39□□□□□ -1.07
VTA1-201ENST00000367621 HRGP04196 525 aa8.39□□□□□ -1.07
VTA1-201ENST00000367621 QDPRP09417 244 aa8.39□□□□□ -1.07
VTA1-201ENST00000367621 HSMCR30P0CW71 290 aa8.39□□□□□ -1.07
VTA1-201ENST00000367621 CD36P16671 472 aa8.39□□□□□ -1.07
VTA1-201ENST00000367621 GADD45AP24522 165 aa8.39□□□□□ -1.07
VTA1-201ENST00000367621 RPS27P42677 84 aaKnown RBP8.39□□□□□ -1.07
VTA1-201ENST00000367621 CENPAP49450 140 aa8.39□□□□□ -1.07
VTA1-201ENST00000367621 GTF2A1P52655 376 aaPredicted RBP8.39□□□□□ -1.07
VTA1-201ENST00000367621 BLVRAP53004 296 aa8.39□□□□□ -1.07
VTA1-201ENST00000367621 TMBIM6P55061 237 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms