RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 SOX14O95416 240 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 GPLD1P80108 840 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 ELOCQ15369 112 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 CADM3Q8N126 398 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 SEH1LQ96EE3 360 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 ASB16Q96NS5 453 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 UBE2ZQ9H832 354 aaPredicted RBP3.46□□□□□ -1.86
SYNE1-207ENST00000367255 ISM1B1AKI9 464 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 RPLP1P05386 114 aaKnown RBP3.46□□□□□ -1.86
SYNE1-207ENST00000367255 SLC6A12P48065 614 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 CAV3P56539 151 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 DESI1Q6ICB0 168 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 TOE1Q96GM8 510 aaKnown RBP3.46□□□□□ -1.86
SYNE1-207ENST00000367255 DERL1Q9BUN8 251 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 PCDH8O95206 1070 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 NID1P14543 1247 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 PPP1CAP62136 330 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 SUMO1P63165 101 aaKnown RBP3.46□□□□□ -1.86
SYNE1-207ENST00000367255 HIST3H3Q16695 136 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 NKAIN2Q5VXU1 208 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 RGMBQ6NW40 437 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 TMIGD1Q6UXZ0 262 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 OR4K13Q8NH42 304 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 AQP3Q92482 292 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 SLC6A18Q96N87 628 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 PLEKHB1Q9UF11 243 aaPredicted RBP3.46□□□□□ -1.86
SYNE1-207ENST00000367255 SEMG1P04279 462 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 BPIFB3P59826 476 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 IL13RA2Q14627 380 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 MOB3CQ70IA8 216 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 TP53INP2Q8IXH6 220 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 WDTC1Q8N5D0 677 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 C5orf17Q8NAS9 161 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 TOX2Q96NM4 488 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 B4DXG7 233 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 H7BYZ3 331 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 IFNL4K9M1U5 179 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 TGM5O43548 720 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 ACTL6AO96019 429 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 EFNA3P52797 238 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 MVDP53602 400 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 CCL23P55773 120 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 CLEC18BQ6UXF7 455 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF689Q96CS4 500 aaPredicted RBP3.46□□□□□ -1.86
SYNE1-207ENST00000367255 PPIL3Q9H2H8 161 aaKnown RBP3.46□□□□□ -1.86
SYNE1-207ENST00000367255 NIT2Q9NQR4 276 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 MGAT4CQ9UBM8 478 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 DRD1P21728 446 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF676Q8N7Q3 588 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 DAZLQ92904 295 aaKnown RBP3.46□□□□□ -1.86
SYNE1-207ENST00000367255 SLC35A5Q9BS91 424 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF35P13682 527 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 AVPR1BP47901 424 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 CEACAM7Q14002 265 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 VAX1Q5SQQ9 334 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 LNX1Q8TBB1 728 aaPredicted RBP3.46□□□□□ -1.86
SYNE1-207ENST00000367255 ARRDC3Q96B67 414 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 TRMT2BQ96GJ1 504 aaKnown RBP3.46□□□□□ -1.86
SYNE1-207ENST00000367255 OR1F2PQ96R84 312 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 FKRPQ9H9S5 495 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 FAM90A9PA6NNJ1 464 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 NDUFB6O95139 128 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 TCRBP04435 133 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 ACKR3P25106 362 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 ID4P47928 161 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 NPAS4Q8IUM7 802 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 H1FOOQ8IZA3 346 aaPredicted RBP3.46□□□□□ -1.86
SYNE1-207ENST00000367255 NAGSQ8N159 534 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 OR52N4Q8NGI2 321 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 CLCA3PQ9Y6N3 262 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 SLC38A8A6NNN8 435 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 HOXC4P09017 264 aaPredicted RBP3.46□□□□□ -1.86
SYNE1-207ENST00000367255 ARNTP27540 789 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 IHHQ14623 411 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 OR52B6Q8NGF0 335 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 RAET1EQ8TD07 263 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 TUBD1Q9UJT1 453 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 TMED7Q9Y3B3 224 aa3.46□□□□□ -1.86
SYNE1-207ENST00000367255 CA7P43166 264 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 SPIN3Q5JUX0 258 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 CABLES2Q9BTV7 478 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 SEMA4BQ9NPR2 832 aaPredicted RBP3.45□□□□□ -1.86
SYNE1-207ENST00000367255 CHST2Q9Y4C5 530 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 CBX4O00257 560 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 SP9P0CG40 484 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF787Q6DD87 383 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 RNF166Q96A37 237 aaPredicted RBP3.45□□□□□ -1.86
SYNE1-207ENST00000367255 ARHGDIGQ99819 225 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 TREM1Q9NP99 234 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 E9PCH4 1651 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 HEPACAM2A8MVW5 462 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 PDGFRLQ15198 375 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 CNIH2Q6PI25 160 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 USP53Q70EK8 1073 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 ERN2Q76MJ5 926 aaKnown RBP3.45□□□□□ -1.86
SYNE1-207ENST00000367255 GALNT10Q86SR1 603 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 OSGIN2Q9Y236 505 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 GNSP15586 552 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 ACPTQ9BZG2 426 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 LYRM4Q9HD34 91 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms