RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 SUMO3P55854 103 aaPredicted RBP10.56□□□□□ -0.72
SYNE1-204ENST00000367248 FAM185AQ8N0U4 392 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 DMBX1Q8NFW5 382 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 GNRHR2Q96P88 292 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 CMC2Q9NRP2 79 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 OR52A1Q9UKL2 312 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 MAB21L2Q9Y586 359 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 HS3ST1O14792 307 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 P2RX6O15547 441 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 TUSC2O75896 110 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 ATP1B1P05026 303 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 SBK2P0C263 348 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 HLA-DMAP28067 261 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 MEOX1P50221 254 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 SPCS2Q15005 226 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 DMRTC1Q5HYR2 192 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 OR1S1Q8NH92 325 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 PHYHIPQ92561 330 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 KISS1RQ969F8 398 aaPredicted RBP10.56□□□□□ -0.72
SYNE1-204ENST00000367248 OR14A2Q96R54 314 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 CMSS1Q9BQ75 279 aaKnown RBP10.56□□□□□ -0.72
SYNE1-204ENST00000367248 B3GALT5Q9Y2C3 310 aa10.56□□□□□ -0.72
SYNE1-204ENST00000367248 OR6C65A6NJZ3 312 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 RP2O75695 350 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 UBCP0CG48 685 aaKnown RBP10.55□□□□□ -0.72
SYNE1-204ENST00000367248 IHHQ14623 411 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 OR8G1Q15617 311 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 CORO6Q6QEF8 472 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 OR4D6Q8NGJ1 314 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 LIPHQ8WWY8 451 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 HIPK2Q9H2X6 1198 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 HINT3Q9NQE9 182 aaKnown RBP10.55□□□□□ -0.72
SYNE1-204ENST00000367248 LSM5Q9Y4Y9 91 aaKnown RBP10.55□□□□□ -0.72
SYNE1-204ENST00000367248 M0R036 132 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 ARPC1BO15143 372 aaKnown RBP10.55□□□□□ -0.72
SYNE1-204ENST00000367248 CAV2P51636 162 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 CLDN12P56749 244 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 VN1R1Q9GZP7 353 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 MRPS28Q9Y2Q9 187 aaKnown RBP10.55□□□□□ -0.72
SYNE1-204ENST00000367248 POLR2AP24928 1970 aaKnown RBP10.55□□□□□ -0.72
SYNE1-204ENST00000367248 PRAF2O60831 178 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 CBR3O75828 277 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 GRB2P62993 217 aaKnown RBP10.55□□□□□ -0.72
SYNE1-204ENST00000367248 PWWP2BQ6NUJ5 590 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 CD163Q86VB7 1156 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 KIF18BQ86Y91 864 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 MBD1Q9UIS9 605 aaPredicted RBP10.55□□□□□ -0.72
SYNE1-204ENST00000367248 LAMA4Q16363 1823 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 AGAP14A8MT82 685 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 ADAM23O75077 832 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 FZD7O75084 574 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 CHRNB1P11230 501 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 SNRPBP14678 240 aaKnown RBP10.55□□□□□ -0.72
SYNE1-204ENST00000367248 PTGS2P35354 604 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 B3GNTL1Q67FW5 361 aaPredicted RBP10.55□□□□□ -0.72
SYNE1-204ENST00000367248 LCN10Q6JVE6 187 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 METAP1DQ6UB28 335 aaPredicted RBP10.55□□□□□ -0.72
SYNE1-204ENST00000367248 GPR155Q7Z3F1 870 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 FAM26EQ8N5C1 309 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 OR2T35Q8NGX2 323 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 LRFN5Q96NI6 719 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 GDF15Q99988 308 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 RANBP3Q9H6Z4 567 aaPredicted RBP10.55□□□□□ -0.72
SYNE1-204ENST00000367248 PMS2P1A4D2B8 440 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 SELENOFO60613 162 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 ALDOBP05062 364 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 QDPRP09417 244 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 ISL1P61371 349 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 RPL18Q07020 188 aaKnown RBP10.55□□□□□ -0.72
SYNE1-204ENST00000367248 RIPPLY1Q0D2K3 151 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 OR2L13Q8N349 312 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 TECTBQ96PL2 329 aa10.55□□□□□ -0.72
SYNE1-204ENST00000367248 SLC22A5O76082 557 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 PTPN6P29350 595 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 SHC1P29353 583 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 MTNR1BP49286 362 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 AKR1D1P51857 326 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 GNB1P62873 340 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 SPINK14Q6IE38 97 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 SPAG16Q8N0X2 631 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 GALNT16Q8N428 558 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 GCM1Q9NP62 436 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 CDC14BO60729 498 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 CNIH1O95406 144 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 CDK2P24941 298 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 FOXF1Q12946 379 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 YIF1BQ5BJH7 314 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 FAM71CQ8NEG0 241 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 OR13F1Q8NGS4 319 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 DUS3LQ96G46 650 aaKnown RBP10.54□□□□□ -0.72
SYNE1-204ENST00000367248 NEU3Q9UQ49 428 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 SLC5A6Q9Y289 635 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 HPGDSO60760 199 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 SC5DO75845 299 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 NKX2-2O95096 273 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 TEKQ02763 1124 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 CT55Q8WUE5 264 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 APOBEC4Q8WW27 367 aaKnown RBP10.54□□□□□ -0.72
SYNE1-204ENST00000367248 ACKR4Q9NPB9 350 aa10.54□□□□□ -0.72
SYNE1-204ENST00000367248 SPTBN2O15020 2390 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms