RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 ZC3H3Q8IXZ2 948 aaKnown RBP10.25□□□□□ -0.77
CDC42BPA-205ENST00000366769 GORASP2Q9H8Y8 452 aa10.25□□□□□ -0.77
CDC42BPA-205ENST00000366769 KLK4Q9Y5K2 254 aa10.25□□□□□ -0.77
CDC42BPA-205ENST00000366769 ZNF623O75123 536 aa10.25□□□□□ -0.77
CDC42BPA-205ENST00000366769 FAM26DQ5JW98 314 aa10.25□□□□□ -0.77
CDC42BPA-205ENST00000366769 AADACL3Q5VUY0 350 aa10.25□□□□□ -0.77
CDC42BPA-205ENST00000366769 OR4F5Q8NH21 305 aa10.25□□□□□ -0.77
CDC42BPA-205ENST00000366769 OR4F4Q96R69 305 aa10.25□□□□□ -0.77
CDC42BPA-205ENST00000366769 LYSMD1Q96S90 227 aa10.25□□□□□ -0.77
CDC42BPA-205ENST00000366769 DLEC1Q9Y238 1755 aa10.25□□□□□ -0.77
CDC42BPA-205ENST00000366769 GABARAPH6UMI1 98 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 SLURP2P0DP57 97 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 CEBPEQ15744 281 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 MPEG1Q2M385 716 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 CTU1Q7Z7A3 348 aaKnown RBP10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 TEX37Q96LM6 180 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 ZFYVE21Q9BQ24 234 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 C1GALT1Q9NS00 363 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 DUSP11O75319 330 aaKnown RBP10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 EPHA2P29317 976 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 SNRPNP63162 240 aaKnown RBP10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 TMEM115Q12893 351 aaPredicted RBP10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 APH1BQ8WW43 257 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 H1FXQ92522 213 aaKnown RBP10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 PIGCQ92535 297 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 A0A1B0GUH1 482 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 SH2D7A6NKC9 451 aaPredicted RBP10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 ZNF280AP59817 542 aaPredicted RBP10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 RGNQ15493 299 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 RARRES3Q9UL19 164 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 KDM4FA0A1W2PPD8 638 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 FAM183AA6NL82 134 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 S1PR4O95977 384 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 SCGB1C2P0DMR2 95 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 NFYBP25208 207 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 CCDC190Q86UF4 302 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 PARD6GQ9BYG4 376 aaPredicted RBP10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 NLE1Q9NVX2 485 aaPredicted RBP10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 MTCH1Q9NZJ7 389 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 EPXP11678 715 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 ST3GAL2Q16842 350 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 DMRTA1Q5VZB9 504 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 FBXL22Q6P050 247 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 OR4N2Q8NGD1 307 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 C11orf49Q9H6J7 331 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 MBD1Q9UIS9 605 aaPredicted RBP10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 SLC7A7Q9UM01 511 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 ARL6IP1Q15041 203 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 DEFB110Q30KQ9 67 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 TMEM179BQ7Z7N9 219 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 F2RL3Q96RI0 385 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 SERINC2Q96SA4 455 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 MYOTQ9UBF9 498 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 SCML1Q9UN30 329 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 PIK3C2AO00443 1686 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 H7BYZ3 331 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 RPA2P15927 270 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 GNB1P62873 340 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 OR1S2Q8NGQ3 325 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 NUDCD2Q8WVJ2 157 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 IRF7Q92985 503 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 LIN7CQ9NUP9 197 aaKnown RBP10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 GPR160Q9UJ42 338 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 HPNP05981 417 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 ATXN1LP0C7T5 689 aaKnown RBP10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 TMIGD3P0DMS9 266 aaPredicted RBP10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 LY6G5CQ5SRR4 150 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 ZNF583Q96ND8 569 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 PLCH1Q4KWH8 1693 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 COL5A2P05997 1499 aaPredicted RBP10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 TRDV1A0A1B0GX56 115 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 AQP7P3A6NL99 342 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 MFGE8Q08431 387 aaPredicted RBP10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 OR5L1Q8NGL2 311 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 ZDHHC11Q9H8X9 412 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 YIPF1Q9Y548 306 aa10.24□□□□□ -0.77
CDC42BPA-205ENST00000366769 ARG1P05089 322 aa10.23□□□□□ -0.77
CDC42BPA-205ENST00000366769 FBP1P09467 338 aa10.23□□□□□ -0.77
CDC42BPA-205ENST00000366769 PCBP4P57723 403 aaKnown RBP10.23□□□□□ -0.77
CDC42BPA-205ENST00000366769 OR8B8Q15620 311 aa10.23□□□□□ -0.77
CDC42BPA-205ENST00000366769 TOMM34Q15785 309 aaPredicted RBP10.23□□□□□ -0.77
CDC42BPA-205ENST00000366769 MOB3CQ70IA8 216 aa10.23□□□□□ -0.77
CDC42BPA-205ENST00000366769 LMNTD1Q8N9Z9 388 aa10.23□□□□□ -0.77
CDC42BPA-205ENST00000366769 RPUSD4Q96CM3 377 aaKnown RBP10.23□□□□□ -0.77
CDC42BPA-205ENST00000366769 TRMT61AQ96FX7 289 aaKnown RBP10.23□□□□□ -0.77
CDC42BPA-205ENST00000366769 DMWDQ09019 674 aa10.23□□□□□ -0.77
CDC42BPA-205ENST00000366769 ZNF273Q14593 569 aa10.23□□□□□ -0.77
CDC42BPA-205ENST00000366769 LRRC18Q8N456 261 aa10.23□□□□□ -0.77
CDC42BPA-205ENST00000366769 SLC24A4Q8NFF2 622 aa10.23□□□□□ -0.77
CDC42BPA-205ENST00000366769 OR52N2Q8NGI0 321 aa10.23□□□□□ -0.77
CDC42BPA-205ENST00000366769 ZMAT3Q9HA38 289 aaKnown RBP10.23□□□□□ -0.77
CDC42BPA-205ENST00000366769 ADAMTS4O75173 837 aa10.23□□□□□ -0.77
CDC42BPA-205ENST00000366769 EOMESO95936 686 aa10.23□□□□□ -0.77
CDC42BPA-205ENST00000366769 EFNA3P52797 238 aa10.23□□□□□ -0.77
CDC42BPA-205ENST00000366769 ZNF124Q15973 351 aa10.23□□□□□ -0.77
CDC42BPA-205ENST00000366769 FAM24BQ8N5W8 94 aa10.23□□□□□ -0.77
CDC42BPA-205ENST00000366769 NPWQ8N729 165 aa10.23□□□□□ -0.77
CDC42BPA-205ENST00000366769 OR13D1Q8NGV5 346 aa10.23□□□□□ -0.77
CDC42BPA-205ENST00000366769 PSMF1Q92530 271 aa10.23□□□□□ -0.77
CDC42BPA-205ENST00000366769 TMEM19Q96HH6 336 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms