RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 CD300LDQ6UXZ3 194 aa11.05□□□□□ -0.64
CDC42BPA-203ENST00000366766 SLC30A7Q8NEW0 376 aa11.05□□□□□ -0.64
CDC42BPA-203ENST00000366766 MDC1Q14676 2089 aaKnown RBP11.05□□□□□ -0.64
CDC42BPA-203ENST00000366766 BIDP55957 195 aa11.05□□□□□ -0.64
CDC42BPA-203ENST00000366766 FAM122BQ7Z309 247 aa11.05□□□□□ -0.64
CDC42BPA-203ENST00000366766 SMCO4Q9NRQ5 59 aa11.05□□□□□ -0.64
CDC42BPA-203ENST00000366766 SOCS6O14544 535 aa11.05□□□□□ -0.64
CDC42BPA-203ENST00000366766 SOD1P00441 154 aa11.05□□□□□ -0.64
CDC42BPA-203ENST00000366766 ZNF728P0DKX0 622 aa11.05□□□□□ -0.64
CDC42BPA-203ENST00000366766 SHC1P29353 583 aa11.05□□□□□ -0.64
CDC42BPA-203ENST00000366766 RAB11AP62491 216 aa11.05□□□□□ -0.64
CDC42BPA-203ENST00000366766 ZP2Q05996 745 aa11.05□□□□□ -0.64
CDC42BPA-203ENST00000366766 TBPL2Q6SJ96 375 aa11.05□□□□□ -0.64
CDC42BPA-203ENST00000366766 NAXDQ8IW45 347 aa11.05□□□□□ -0.64
CDC42BPA-203ENST00000366766 CADM3Q8N126 398 aa11.05□□□□□ -0.64
CDC42BPA-203ENST00000366766 RIMS4Q9H426 269 aaPredicted RBP11.05□□□□□ -0.64
CDC42BPA-203ENST00000366766 SELEP16581 610 aa11.05□□□□□ -0.64
CDC42BPA-203ENST00000366766 IL2RGP31785 369 aa11.05□□□□□ -0.64
CDC42BPA-203ENST00000366766 BAK1Q16611 211 aa11.05□□□□□ -0.64
CDC42BPA-203ENST00000366766 A0A1W2PR48 441 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 ZNF44P15621 663 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 NFYBP25208 207 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 DPP4P27487 766 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 TANGO2Q6ICL3 276 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 COX15Q7KZN9 410 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 SMIM14Q96QK8 99 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 SLC25A32Q9H2D1 315 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 BCKDHBP21953 392 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 MEX3BQ6ZN04 569 aaKnown RBP11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 TEX101Q9BY14 249 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 PBX4Q9BYU1 374 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 STK17BO94768 372 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 ARIH2OSQ8N7S6 290 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 PLPP5Q8NEB5 264 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 OR13C9Q8NGT0 318 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 NT5CQ8TCD5 201 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 PRAMEF27A3QJZ7 478 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 FADS1O60427 444 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 SEC61A1P61619 476 aaKnown RBP11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 MLF2Q15773 248 aaPredicted RBP11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 PRAMEF9Q5VWM5 478 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 FAM111BQ6SJ93 734 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 AAED1Q7RTV5 226 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 TCTE3Q8IZS6 198 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 FER1L6-AS2Q96M78 137 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 CLEC2DQ9UHP7 191 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 PLRG1O43660 514 aaKnown RBP11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 KITLGP21583 273 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 CAPZBP47756 277 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 TPMTP51580 245 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 ZNF674Q2M3X9 581 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 SLC37A2Q8TED4 501 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 MUCL1Q96DR8 90 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 DOK1Q99704 481 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 A0A1W2PPV4 95 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 TAGLN2P37802 199 aaKnown RBP11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 UBE2MP61081 183 aaKnown RBP11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 GLYR1Q49A26 553 aaPredicted RBP11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 LGI3Q8N145 548 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 WDR34Q96EX3 536 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 MACROD1Q9BQ69 325 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 RBPJQ06330 500 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 HEPHL1Q6MZM0 1159 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 HIST2H3AQ71DI3 136 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 TCEAL2Q9H3H9 227 aaPredicted RBP11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 LINC01387J3KSC0 135 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 F2RL1P55085 397 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 FAM185AQ8N0U4 392 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 TMEM178AQ8NBL3 297 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 MAP3K3Q99759 626 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 FBXL4Q9UKA2 621 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 FREM3P0C091 2139 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 OR7C1O76099 320 aaPredicted RBP11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 HSF1Q00613 529 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 ARHGEF39Q8N4T4 335 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 ZNF610Q8N9Z0 462 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 ZNF391Q9UJN7 358 aa11.04□□□□□ -0.64
CDC42BPA-203ENST00000366766 IFITM5A6NNB3 132 aa11.03□□□□□ -0.64
CDC42BPA-203ENST00000366766 BLVRBP30043 206 aaPredicted RBP11.03□□□□□ -0.64
CDC42BPA-203ENST00000366766 SELENOIQ9C0D9 397 aa11.03□□□□□ -0.64
CDC42BPA-203ENST00000366766 LILRA5A6NI73 299 aa11.03□□□□□ -0.64
CDC42BPA-203ENST00000366766 FUCA1P04066 466 aa11.03□□□□□ -0.64
CDC42BPA-203ENST00000366766 SLC17A4Q9Y2C5 497 aa11.03□□□□□ -0.64
CDC42BPA-203ENST00000366766 CLDN20P56880 219 aa11.03□□□□□ -0.64
CDC42BPA-203ENST00000366766 SELENBP1Q13228 472 aa11.03□□□□□ -0.64
CDC42BPA-203ENST00000366766 WFDC5Q8TCV5 224 aa11.03□□□□□ -0.64
CDC42BPA-203ENST00000366766 LAMP3Q9UQV4 416 aa11.03□□□□□ -0.64
CDC42BPA-203ENST00000366766 SORDQ00796 357 aa11.03□□□□□ -0.64
CDC42BPA-203ENST00000366766 OR11L1Q8NGX0 322 aa11.03□□□□□ -0.64
CDC42BPA-203ENST00000366766 SMIM4Q8WVI0 70 aa11.03□□□□□ -0.64
CDC42BPA-203ENST00000366766 PCDHB10Q9UN67 800 aa11.03□□□□□ -0.64
CDC42BPA-203ENST00000366766 COPS3Q9UNS2 423 aa11.03□□□□□ -0.64
CDC42BPA-203ENST00000366766 COMTD1Q86VU5 262 aa11.03□□□□□ -0.64
CDC42BPA-203ENST00000366766 PTOV1Q86YD1 416 aa11.03□□□□□ -0.64
CDC42BPA-203ENST00000366766 NPRL2Q8WTW4 380 aa11.03□□□□□ -0.64
CDC42BPA-203ENST00000366766 TTC9Q92623 222 aa11.03□□□□□ -0.64
CDC42BPA-203ENST00000366766 VSX1Q9NZR4 365 aaPredicted RBP11.03□□□□□ -0.64
CDC42BPA-203ENST00000366766 IRS1P35568 1242 aa11.03□□□□□ -0.64
CDC42BPA-203ENST00000366766 GPR3P46089 330 aa11.03□□□□□ -0.64
CDC42BPA-203ENST00000366766 PPT1P50897 306 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms