RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 RPS27P42677 84 aaKnown RBP17.84■□□□□ 0.45
TRIM58-201ENST00000366481 SRSF3P84103 164 aaKnown RBP17.84■□□□□ 0.45
TRIM58-201ENST00000366481 RNF113BQ8IZP6 322 aaKnown RBP17.84■□□□□ 0.45
TRIM58-201ENST00000366481 SYS1Q8N2H4 156 aa17.84■□□□□ 0.45
TRIM58-201ENST00000366481 NKD1Q969G9 470 aa17.84■□□□□ 0.45
TRIM58-201ENST00000366481 ARL11Q969Q4 196 aa17.84■□□□□ 0.45
TRIM58-201ENST00000366481 Q96M85 177 aa17.84■□□□□ 0.45
TRIM58-201ENST00000366481 CMTM3Q96MX0 182 aa17.84■□□□□ 0.45
TRIM58-201ENST00000366481 TSSK2Q96PF2 358 aa17.84■□□□□ 0.45
TRIM58-201ENST00000366481 SLC22A7Q9Y694 548 aa17.84■□□□□ 0.45
TRIM58-201ENST00000366481 URB1O60287 2271 aaKnown RBP17.84■□□□□ 0.45
TRIM58-201ENST00000366481 TMEM72A0PK05 275 aa17.84■□□□□ 0.45
TRIM58-201ENST00000366481 HOXB2P14652 356 aa17.84■□□□□ 0.45
TRIM58-201ENST00000366481 EFNB2P52799 333 aa17.84■□□□□ 0.45
TRIM58-201ENST00000366481 ATP1B3P54709 279 aa17.84■□□□□ 0.45
TRIM58-201ENST00000366481 PEA15Q15121 130 aa17.84■□□□□ 0.45
TRIM58-201ENST00000366481 ALG10BQ5I7T1 473 aa17.84■□□□□ 0.45
TRIM58-201ENST00000366481 ARHGAP40Q5TG30 622 aa17.84■□□□□ 0.45
TRIM58-201ENST00000366481 JMJD6Q6NYC1 403 aaPredicted RBP17.84■□□□□ 0.45
TRIM58-201ENST00000366481 RHOUQ7L0Q8 258 aa17.84■□□□□ 0.45
TRIM58-201ENST00000366481 TSEN15Q8WW01 171 aaKnown RBP17.84■□□□□ 0.45
TRIM58-201ENST00000366481 PRMT8Q9NR22 394 aaPredicted RBP17.84■□□□□ 0.45
TRIM58-201ENST00000366481 DCNP07585 359 aaKnown RBP17.83■□□□□ 0.45
TRIM58-201ENST00000366481 CEBPEQ15744 281 aa17.83■□□□□ 0.45
TRIM58-201ENST00000366481 PLEKHN1Q494U1 663 aaPredicted RBP17.83■□□□□ 0.45
TRIM58-201ENST00000366481 TMED6Q8WW62 240 aa17.83■□□□□ 0.45
TRIM58-201ENST00000366481 RERGQ96A58 199 aaPredicted RBP17.83■□□□□ 0.45
TRIM58-201ENST00000366481 C19orf53Q9UNZ5 99 aaPredicted RBP17.83■□□□□ 0.45
TRIM58-201ENST00000366481 A0A0B4J2A0 478 aa17.83■□□□□ 0.44
TRIM58-201ENST00000366481 PQLC2LA1A4F0 135 aa17.83■□□□□ 0.44
TRIM58-201ENST00000366481 ELOA3DA6NLF2 546 aaPredicted RBP17.83■□□□□ 0.44
TRIM58-201ENST00000366481 KLF8O95600 359 aaPredicted RBP17.83■□□□□ 0.44
TRIM58-201ENST00000366481 DBIP07108 87 aaKnown RBP17.83■□□□□ 0.44
TRIM58-201ENST00000366481 CALCBP10092 127 aa17.83■□□□□ 0.44
TRIM58-201ENST00000366481 SMAD2Q15796 467 aaKnown RBP17.83■□□□□ 0.44
TRIM58-201ENST00000366481 ELOA3BQ3SY89 546 aa17.83■□□□□ 0.44
TRIM58-201ENST00000366481 CD163Q86VB7 1156 aa17.83■□□□□ 0.44
TRIM58-201ENST00000366481 ELOA3Q8NG57 546 aa17.83■□□□□ 0.44
TRIM58-201ENST00000366481 STOML3Q8TAV4 291 aa17.83■□□□□ 0.44
TRIM58-201ENST00000366481 SLC2A12Q8TD20 617 aa17.83■□□□□ 0.44
TRIM58-201ENST00000366481 TMEM106AQ96A25 262 aa17.83■□□□□ 0.44
TRIM58-201ENST00000366481 ZC3H10Q96K80 434 aaKnown RBP17.83■□□□□ 0.44
TRIM58-201ENST00000366481 GAS2L1Q99501 681 aaPredicted RBP17.83■□□□□ 0.44
TRIM58-201ENST00000366481 HRASLS2Q9NWW9 162 aa17.83■□□□□ 0.44
TRIM58-201ENST00000366481 SHPKQ9UHJ6 478 aa17.83■□□□□ 0.44
TRIM58-201ENST00000366481 WDFY3Q8IZQ1 3526 aa17.83■□□□□ 0.44
TRIM58-201ENST00000366481 IFNA4P05014 189 aa17.83■□□□□ 0.44
TRIM58-201ENST00000366481 C11orf87Q6NUJ2 197 aa17.83■□□□□ 0.44
TRIM58-201ENST00000366481 KCNRGQ8N5I3 272 aa17.83■□□□□ 0.44
TRIM58-201ENST00000366481 SERINC2Q96SA4 455 aa17.83■□□□□ 0.44
TRIM58-201ENST00000366481 POTEKPQ9BYX7 375 aa17.83■□□□□ 0.44
TRIM58-201ENST00000366481 GSN-AS1Q9NRJ2 163 aa17.83■□□□□ 0.44
TRIM58-201ENST00000366481 MCIDASD6RGH6 385 aa17.82■□□□□ 0.44
TRIM58-201ENST00000366481 CTNSO60931 367 aa17.82■□□□□ 0.44
TRIM58-201ENST00000366481 LYPD3O95274 346 aa17.82■□□□□ 0.44
TRIM58-201ENST00000366481 CENPAP49450 140 aa17.82■□□□□ 0.44
TRIM58-201ENST00000366481 NR0B1P51843 470 aaKnown RBP17.82■□□□□ 0.44
TRIM58-201ENST00000366481 ZNF600Q6ZNG1 722 aa17.82■□□□□ 0.44
TRIM58-201ENST00000366481 ZBTB8AQ96BR9 441 aa17.82■□□□□ 0.44
TRIM58-201ENST00000366481 RASD2Q96D21 266 aa17.82■□□□□ 0.44
TRIM58-201ENST00000366481 SPACA7Q96KW9 195 aa17.82■□□□□ 0.44
TRIM58-201ENST00000366481 MTIF3Q9H2K0 278 aaKnown RBP17.82■□□□□ 0.44
TRIM58-201ENST00000366481 NKX2-4Q9H2Z4 354 aa17.82■□□□□ 0.44
TRIM58-201ENST00000366481 SRA1Q9HD15 236 aaKnown RBP17.82■□□□□ 0.44
TRIM58-201ENST00000366481 YBX2Q9Y2T7 364 aaKnown RBP17.82■□□□□ 0.44
TRIM58-201ENST00000366481 GGT3PA6NGU5 568 aa17.82■□□□□ 0.44
TRIM58-201ENST00000366481 XRCC3O43542 346 aa17.82■□□□□ 0.44
TRIM58-201ENST00000366481 IGKV1D-16P01601 117 aa17.82■□□□□ 0.44
TRIM58-201ENST00000366481 ADCYAP1P18509 176 aa17.82■□□□□ 0.44
TRIM58-201ENST00000366481 SLC2A5P22732 501 aa17.82■□□□□ 0.44
TRIM58-201ENST00000366481 CCR4P51679 360 aa17.82■□□□□ 0.44
TRIM58-201ENST00000366481 Q499Y3 187 aa17.82■□□□□ 0.44
TRIM58-201ENST00000366481 SLC35F3Q8IY50 421 aa17.82■□□□□ 0.44
TRIM58-201ENST00000366481 POMGNT2Q8NAT1 580 aa17.82■□□□□ 0.44
TRIM58-201ENST00000366481 CCDC3Q9BQI4 270 aa17.82■□□□□ 0.44
TRIM58-201ENST00000366481 BARX1Q9HBU1 254 aaPredicted RBP17.82■□□□□ 0.44
TRIM58-201ENST00000366481 DHCR7Q9UBM7 475 aaKnown RBP17.82■□□□□ 0.44
TRIM58-201ENST00000366481 KLF15Q9UIH9 416 aa17.82■□□□□ 0.44
TRIM58-201ENST00000366481 C1orf196B1AJZ1 125 aa17.81■□□□□ 0.44
TRIM58-201ENST00000366481 OR2F2O95006 317 aa17.81■□□□□ 0.44
TRIM58-201ENST00000366481 PMS2P2O95744 297 aa17.81■□□□□ 0.44
TRIM58-201ENST00000366481 ACTL6AO96019 429 aa17.81■□□□□ 0.44
TRIM58-201ENST00000366481 ADRA2CP18825 462 aa17.81■□□□□ 0.44
TRIM58-201ENST00000366481 KIR2DL1P43626 348 aaPredicted RBP17.81■□□□□ 0.44
TRIM58-201ENST00000366481 PPT1P50897 306 aa17.81■□□□□ 0.44
TRIM58-201ENST00000366481 OR2F1Q13607 317 aa17.81■□□□□ 0.44
TRIM58-201ENST00000366481 BMFQ96LC9 184 aa17.81■□□□□ 0.44
TRIM58-201ENST00000366481 FAM60AQ9NP50 221 aa17.81■□□□□ 0.44
TRIM58-201ENST00000366481 RPH3AQ9Y2J0 694 aaPredicted RBP17.81■□□□□ 0.44
TRIM58-201ENST00000366481 DOCK8Q8NF50 2099 aa17.81■□□□□ 0.44
TRIM58-201ENST00000366481 GPR89AB7ZAQ6 455 aa17.81■□□□□ 0.44
TRIM58-201ENST00000366481 BLOC1S5-TXNDC5H3BN57 136 aa17.81■□□□□ 0.44
TRIM58-201ENST00000366481 PLRG1O43660 514 aaKnown RBP17.81■□□□□ 0.44
TRIM58-201ENST00000366481 GPR89BP0CG08 455 aa17.81■□□□□ 0.44
TRIM58-201ENST00000366481 ZNF28P17035 718 aa17.81■□□□□ 0.44
TRIM58-201ENST00000366481 POU3F4P49335 361 aa17.81■□□□□ 0.44
TRIM58-201ENST00000366481 MPPED2Q15777 294 aa17.81■□□□□ 0.44
TRIM58-201ENST00000366481 ITPRIPL2Q3MIP1 535 aa17.81■□□□□ 0.44
TRIM58-201ENST00000366481 ACOT7LQ6ZUV0 252 aa17.81■□□□□ 0.44
TRIM58-201ENST00000366481 USP53Q70EK8 1073 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms