RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 METAP1P53582 386 aa12.3□□□□□ -0.44
LDB3-202ENST00000361373 BLOC1S1P78537 153 aa12.3□□□□□ -0.44
LDB3-202ENST00000361373 TMEM92Q6UXU6 159 aa12.3□□□□□ -0.44
LDB3-202ENST00000361373 APOOLQ6UXV4 268 aa12.3□□□□□ -0.44
LDB3-202ENST00000361373 OR52H1Q8NGJ2 320 aa12.3□□□□□ -0.44
LDB3-202ENST00000361373 ELMOD3Q96FG2 381 aa12.3□□□□□ -0.44
LDB3-202ENST00000361373 C12orf49Q9H741 205 aa12.3□□□□□ -0.44
LDB3-202ENST00000361373 POLDIP2Q9Y2S7 368 aa12.3□□□□□ -0.44
LDB3-202ENST00000361373 NUP205Q92621 2012 aa12.3□□□□□ -0.44
LDB3-202ENST00000361373 ANKUB1A6NFN9 424 aa12.3□□□□□ -0.44
LDB3-202ENST00000361373 PRR35P0CG20 571 aa12.3□□□□□ -0.44
LDB3-202ENST00000361373 SPI1P17947 270 aa12.3□□□□□ -0.44
LDB3-202ENST00000361373 LAP3P28838 519 aa12.3□□□□□ -0.44
LDB3-202ENST00000361373 PRTGQ2VWP7 1150 aa12.3□□□□□ -0.44
LDB3-202ENST00000361373 LIPNQ5VXI9 398 aa12.3□□□□□ -0.44
LDB3-202ENST00000361373 OR56B2PQ8NGI1 322 aa12.3□□□□□ -0.44
LDB3-202ENST00000361373 BCO1Q9HAY6 547 aa12.3□□□□□ -0.44
LDB3-202ENST00000361373 MED16Q9Y2X0 877 aa12.3□□□□□ -0.44
LDB3-202ENST00000361373 SLC22A23A1A5C7 686 aa12.3□□□□□ -0.44
LDB3-202ENST00000361373 MEIS3P1A6NDR6 274 aa12.3□□□□□ -0.44
LDB3-202ENST00000361373 H7C2Y5 167 aa12.3□□□□□ -0.44
LDB3-202ENST00000361373 ARPC5O15511 151 aa12.3□□□□□ -0.44
LDB3-202ENST00000361373 SULT1C4O75897 302 aa12.3□□□□□ -0.44
LDB3-202ENST00000361373 SRMP19623 302 aa12.3□□□□□ -0.44
LDB3-202ENST00000361373 EGR3Q06889 387 aa12.3□□□□□ -0.44
LDB3-202ENST00000361373 PTOV1Q86YD1 416 aa12.3□□□□□ -0.44
LDB3-202ENST00000361373 OR5M11Q96RB7 305 aa12.3□□□□□ -0.44
LDB3-202ENST00000361373 CDCA4Q9BXL8 241 aa12.3□□□□□ -0.44
LDB3-202ENST00000361373 TMEM100Q9NV29 134 aa12.3□□□□□ -0.44
LDB3-202ENST00000361373 ZNF346Q9UL40 294 aaKnown RBP12.3□□□□□ -0.44
LDB3-202ENST00000361373 TMEM82A0PJX8 343 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 TRIM64BA6NI03 449 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 IMPA2O14732 288 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 SELENOFO60613 162 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 HLA-AP01891 365 aaKnown RBP12.29□□□□□ -0.44
LDB3-202ENST00000361373 DSCR4P56555 118 aaPredicted RBP12.29□□□□□ -0.44
LDB3-202ENST00000361373 RPL18Q07020 188 aaKnown RBP12.29□□□□□ -0.44
LDB3-202ENST00000361373 HAGHLQ6PII5 290 aaPredicted RBP12.29□□□□□ -0.44
LDB3-202ENST00000361373 OR4D9Q8NGE8 314 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 RPL3LQ92901 407 aaKnown RBP12.29□□□□□ -0.44
LDB3-202ENST00000361373 ARL11Q969Q4 196 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 TIMD4Q96H15 378 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 TSSK2Q96PF2 358 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 DEFB127Q9H1M4 99 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 HRH3Q9Y5N1 445 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 FXYD1O00168 92 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 SPINT2O43291 252 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 TPT1P13693 172 aaKnown RBP12.29□□□□□ -0.44
LDB3-202ENST00000361373 MFGE8Q08431 387 aaPredicted RBP12.29□□□□□ -0.44
LDB3-202ENST00000361373 CAMK2BQ13554 666 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 KCNJ8Q15842 424 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 DEFB109BQ30KR1 87 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 OR2A2Q6IF42 318 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 CDX2Q99626 313 aaPredicted RBP12.29□□□□□ -0.44
LDB3-202ENST00000361373 PIGLQ9Y2B2 252 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 KIR2DS1A0A191URI9 304 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 MEIOCA2RUB1 952 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 CRYAAP02489 173 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 TBXA2RP21731 343 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 ARRB2P32121 409 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 KIR2DS4P43632 304 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 SIGLEC14Q08ET2 396 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 SLC14A1Q13336 389 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 KIR2DS1Q14954 304 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 FAM109BQ6ICB4 259 aaPredicted RBP12.29□□□□□ -0.44
LDB3-202ENST00000361373 ABI3BPQ7Z7G0 1075 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 MMP28Q9H239 520 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 CEBPZOSA8MTT3 80 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 NKX2-2O95096 273 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 MT-ND4P03905 459 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 GDNFP39905 211 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 RPS18P62269 152 aaKnown RBP12.29□□□□□ -0.44
LDB3-202ENST00000361373 GLYATL3Q5SZD4 288 aa12.29□□□□□ -0.44
LDB3-202ENST00000361373 HINT3Q9NQE9 182 aaKnown RBP12.29□□□□□ -0.44
LDB3-202ENST00000361373 PRSS37A4D1T9 235 aa12.28□□□□□ -0.44
LDB3-202ENST00000361373 XRCC2O43543 280 aa12.28□□□□□ -0.44
LDB3-202ENST00000361373 CXCL13O43927 109 aa12.28□□□□□ -0.44
LDB3-202ENST00000361373 TMEM127O75204 238 aa12.28□□□□□ -0.44
LDB3-202ENST00000361373 CALCBP10092 127 aa12.28□□□□□ -0.44
LDB3-202ENST00000361373 SLC35A2P78381 396 aa12.28□□□□□ -0.44
LDB3-202ENST00000361373 SLAMF6Q96DU3 332 aa12.28□□□□□ -0.44
LDB3-202ENST00000361373 SNX18Q96RF0 628 aa12.28□□□□□ -0.44
LDB3-202ENST00000361373 SLC25A21Q9BQT8 299 aaPredicted RBP12.28□□□□□ -0.44
LDB3-202ENST00000361373 ABHD6Q9BV23 337 aa12.28□□□□□ -0.44
LDB3-202ENST00000361373 TNFRSF12AQ9NP84 129 aa12.28□□□□□ -0.44
LDB3-202ENST00000361373 C1orf123Q9NWV4 160 aa12.28□□□□□ -0.44
LDB3-202ENST00000361373 PRELID3BQ9Y3B1 194 aa12.28□□□□□ -0.44
LDB3-202ENST00000361373 TTC3P53804 2025 aa12.28□□□□□ -0.44
LDB3-202ENST00000361373 HIST1H1CP16403 213 aaKnown RBP12.28□□□□□ -0.44
LDB3-202ENST00000361373 ESCO2Q56NI9 601 aa12.28□□□□□ -0.44
LDB3-202ENST00000361373 KDM8Q8N371 416 aa12.28□□□□□ -0.44
LDB3-202ENST00000361373 SMRP1Q8NCR6 262 aa12.28□□□□□ -0.44
LDB3-202ENST00000361373 HSD17B8Q92506 261 aa12.28□□□□□ -0.44
LDB3-202ENST00000361373 FAM173AQ9BQD7 235 aa12.28□□□□□ -0.44
LDB3-202ENST00000361373 SPNS1Q9H2V7 528 aa12.28□□□□□ -0.44
LDB3-202ENST00000361373 TCEAL2Q9H3H9 227 aaPredicted RBP12.28□□□□□ -0.44
LDB3-202ENST00000361373 SLC22A11Q9NSA0 550 aa12.28□□□□□ -0.44
LDB3-202ENST00000361373 RBFOX1Q9NWB1 397 aaKnown RBP12.28□□□□□ -0.44
LDB3-202ENST00000361373 CTXN2P0C2S0 81 aa12.28□□□□□ -0.44
LDB3-202ENST00000361373 COL9A1P20849 921 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms