RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 TJP1Q07157 1748 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 NXPH3O95157 252 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 AREGP15514 252 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 COX5AP20674 150 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 MEOX1P50221 254 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 EMP3P54852 163 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 ZNF852Q6ZMS4 543 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 C14orf80Q86SX3 495 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 OR2AE1Q8NHA4 323 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 SUCNR1Q9BXA5 334 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 LRRC3CA6NJW4 275 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 RPS25P62851 125 aaKnown RBP8.59□□□□□ -1.03
VPS13A-203ENST00000360280 IER5LQ5T953 404 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 PM20D1Q6GTS8 502 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 OR2A1Q8NGT9 310 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 RRASP10301 218 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 SLC5A12Q1EHB4 618 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 TOMM20LQ6UXN7 152 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 CHRM2P08172 466 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 CCR9P51686 369 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 RHOUQ7L0Q8 258 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 ZFP62Q8NB50 900 aaPredicted RBP8.59□□□□□ -1.03
VPS13A-203ENST00000360280 RELL2Q8NC24 303 aaPredicted RBP8.59□□□□□ -1.03
VPS13A-203ENST00000360280 OR14A16Q8NHC5 309 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 AKR7LQ8NHP1 331 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 IKZF5Q9H5V7 419 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 C8orf33Q9H7E9 229 aaPredicted RBP8.59□□□□□ -1.03
VPS13A-203ENST00000360280 CD80P33681 288 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 B3GNT9Q6UX72 402 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 AMIGO3Q86WK7 504 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 HRASLS5Q96KN8 279 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 SORT1Q99523 831 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 GPR45Q9Y5Y3 372 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 SGK494L7N484 410 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 NRG4Q8WWG1 115 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 SPATA6Q9NWH7 488 aaPredicted RBP8.59□□□□□ -1.03
VPS13A-203ENST00000360280 FAM53CQ9NYF3 392 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 TDRD15B5MCY1 1934 aaKnown RBP8.59□□□□□ -1.03
VPS13A-203ENST00000360280 SLC6A11P48066 632 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 DPY19L2P2Q6ZN68 376 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 TMEM123Q8N131 208 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 SLC39A7Q92504 469 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 HSD17B8Q92506 261 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 IFT22Q9H7X7 185 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 ERVFC1-1P60608 527 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 ASAH1Q13510 395 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 TCTEX1D1Q8N7M0 179 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 OR52R1Q8NGF1 315 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 A3GALT2U3KPV4 340 aa8.59□□□□□ -1.03
VPS13A-203ENST00000360280 M0R143 59 aa8.59□□□□□ -1.04
VPS13A-203ENST00000360280 RPS19P39019 145 aaKnown RBP8.59□□□□□ -1.04
VPS13A-203ENST00000360280 HLA-CQ95604 372 aa8.59□□□□□ -1.04
VPS13A-203ENST00000360280 CXorf58Q96LI9 332 aa8.59□□□□□ -1.04
VPS13A-203ENST00000360280 PSORS1C1Q9UIG5 152 aa8.59□□□□□ -1.04
VPS13A-203ENST00000360280 CSO75390 466 aaKnown RBP8.58□□□□□ -1.04
VPS13A-203ENST00000360280 GNB1P62873 340 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 TFAP2EQ6VUC0 442 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 OSTM1Q86WC4 334 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 SLC46A1Q96NT5 459 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 ZNF768Q9H5H4 540 aaKnown RBP8.58□□□□□ -1.04
VPS13A-203ENST00000360280 DEGS1O15121 323 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 CD1CP29017 333 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 BMI1P35226 326 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 FABP9Q0Z7S8 132 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 LAMTOR5O43504 91 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 OTUD1Q5VV17 481 aaPredicted RBP8.58□□□□□ -1.04
VPS13A-203ENST00000360280 MFSD12Q6NUT3 480 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 RPUSD3Q6P087 351 aaKnown RBP8.58□□□□□ -1.04
VPS13A-203ENST00000360280 OR5AR1Q8NGP9 310 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 DYNC2LI1Q8TCX1 351 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 RTP4Q96DX8 246 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 BCO1Q9HAY6 547 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 NDUFB11Q9NX14 153 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 NSG1A0A0A6YYJ2 146 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 TRBV11-1A0A0K0K1C0 115 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 FAM166BA8MTA8 275 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 TMX2-CTNND1H3BSU7 103 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 GASTP01350 101 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 CST2P09228 141 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 SLC5A2P31639 672 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 UBE3DQ7Z6J8 389 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 OR1J1Q8NGS3 322 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 OR10X1Q8NGY0 326 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 STACQ99469 402 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 WDR83Q9BRX9 315 aaKnown RBP8.58□□□□□ -1.04
VPS13A-203ENST00000360280 CORINQ9Y5Q5 1042 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 BMPR1BO00238 502 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 ZFAND5O76080 213 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 BMPR1AP36894 532 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 CSNK1G2P78368 415 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 ABLIM2Q6H8Q1 611 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 SYT9Q86SS6 491 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 SLC35A4Q96G79 324 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 ORM1P02763 201 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 MGMTP16455 207 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 FA2HQ7L5A8 372 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 RNF39Q9H2S5 420 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 DLL4Q9NR61 685 aa8.58□□□□□ -1.04
VPS13A-203ENST00000360280 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.58□□□□□ -1.04
VPS13A-203ENST00000360280 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms