RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 SLX4Q8IY92 1834 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 A0A1B0GWA3 101 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 BAGE3Q86Y29 109 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 BAGE2Q86Y30 109 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 GPR26Q8NDV2 337 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 OR8U1Q8NH10 309 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 CSNK1G1Q9HCP0 422 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 KRBOX1C9JBD0 128 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 IMPA2O14732 288 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 ELAVL4P26378 380 aaKnown RBP8.92□□□□□ -0.98
CUX1-203ENST00000360264 HLA-FP30511 346 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 ACOT6Q3I5F7 207 aaPredicted RBP8.92□□□□□ -0.98
CUX1-203ENST00000360264 HSD17B8Q92506 261 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 GTF2H4Q92759 462 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 UGT2A1Q9Y4X1 527 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 GLAP06280 429 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 PTAFRP25105 342 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 SNRPGP62308 76 aaKnown RBP8.92□□□□□ -0.98
CUX1-203ENST00000360264 ZNF331Q9NQX6 463 aaPredicted RBP8.92□□□□□ -0.98
CUX1-203ENST00000360264 H3BMQ9 156 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 SHHQ15465 462 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 DBX2Q6ZNG2 339 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 EMC7Q9NPA0 242 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 KCNG2Q9UJ96 466 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 PRSS21Q9Y6M0 314 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 SEC14L6B5MCN3 397 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 CD14P08571 375 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 KIAA1024LP59773 190 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 ELAVL1Q15717 326 aaKnown RBP8.92□□□□□ -0.98
CUX1-203ENST00000360264 C17orf107Q6ZR85 190 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 ESPNLQ6ZVH7 1005 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 SCCPDHQ8NBX0 429 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 SEMA6DQ8NFY4 1073 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 UBTD2Q8WUN7 234 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 GGHQ92820 318 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 TMEM72A0PK05 275 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 FPR3P25089 353 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 MAT1AQ00266 395 aaKnown RBP8.92□□□□□ -0.98
CUX1-203ENST00000360264 ZNF778Q96MU6 729 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 RNF32Q9H0A6 362 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 ZNF346Q9UL40 294 aaKnown RBP8.92□□□□□ -0.98
CUX1-203ENST00000360264 A3GALT2U3KPV4 340 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 LRP6O75581 1613 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 MEIS3P1A6NDR6 274 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 EMX1Q04741 257 aaPredicted RBP8.92□□□□□ -0.98
CUX1-203ENST00000360264 ZNRF4Q8WWF5 429 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 NUDT22Q9BRQ3 303 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 FN3KRPQ9HA64 309 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 TGM1P22735 817 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 PTBP1P26599 531 aaKnown RBP eCLIP8.92□□□□□ -0.984e-11■■■■■ 42.8
CUX1-203ENST00000360264 OVCH1Q7RTY7 1134 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 DHRS9Q9BPW9 319 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 LRRK1Q38SD2 2015 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 DOT1LQ8TEK3 1739 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 TRDV1A0A1B0GX56 115 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 TMEM200AQ86VY9 491 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 TMEM106AQ96A25 262 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 MED18Q9BUE0 208 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 HES7Q9BYE0 225 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 FBXO45P0C2W1 286 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 MS4A2Q01362 244 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 TRIM61Q5EBN2 209 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 CLDN22Q8N7P3 220 aa8.92□□□□□ -0.98
CUX1-203ENST00000360264 TRBV4-1A0A0J9YWV2 114 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 SSBP1Q04837 148 aaKnown RBP8.91□□□□□ -0.98
CUX1-203ENST00000360264 PIANPQ8IYJ0 282 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 SLC38A5Q8WUX1 472 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 ARV1Q9H2C2 271 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 TARM1B6A8C7 271 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 ELSPBP1Q96BH3 223 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 TXLNGYQ9BZA5 131 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 P2RY12Q9H244 342 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 TAAR5O14804 337 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 POU2F2P09086 479 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 DUSP1P28562 367 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 NOVA1P51513 510 aaKnown RBP8.91□□□□□ -0.98
CUX1-203ENST00000360264 ZNF252P-AS1Q0IIN9 211 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 SHISA6Q6ZSJ9 500 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 SIAH1Q8IUQ4 282 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 OR13C8Q8NGS7 320 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 TMEM40Q8WWA1 233 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 PURGQ9UJV8 347 aaKnown RBP8.91□□□□□ -0.98
CUX1-203ENST00000360264 COPS3Q9UNS2 423 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 CHRM2P08172 466 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 DOC2BQ14184 412 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 EDDM3AQ14507 147 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 IHHQ14623 411 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 GHSRQ92847 366 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 TSLPQ969D9 159 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 GNPNAT1Q96EK6 184 aaPredicted RBP8.91□□□□□ -0.98
CUX1-203ENST00000360264 SLC46A2Q9BY10 475 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 SCG5P05408 212 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 FBP1P09467 338 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 RPL27P61353 136 aaKnown RBP8.91□□□□□ -0.98
CUX1-203ENST00000360264 DCXRQ7Z4W1 244 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 FAM3DQ96BQ1 224 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 GLULP15104 373 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 PRKACAP17612 351 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 DEFA6Q01524 100 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 FAPQ12884 760 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms