RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 EDEM2Q9BV94 578 aa13.53□□□□□ -0.24
UBAP1-202ENST00000359544 SEC61A2Q9H9S3 476 aa13.53□□□□□ -0.24
UBAP1-202ENST00000359544 IER3IP1Q9Y5U9 82 aa13.53□□□□□ -0.24
UBAP1-202ENST00000359544 TEX13DA0A0J9YY54 714 aaPredicted RBP13.53□□□□□ -0.24
UBAP1-202ENST00000359544 ZNF208O43345 1280 aa13.53□□□□□ -0.24
UBAP1-202ENST00000359544 AK1P00568 194 aa13.53□□□□□ -0.24
UBAP1-202ENST00000359544 ZNF44P15621 663 aa13.53□□□□□ -0.24
UBAP1-202ENST00000359544 PPT1P50897 306 aa13.53□□□□□ -0.24
UBAP1-202ENST00000359544 ZNF684Q5T5D7 378 aa13.53□□□□□ -0.24
UBAP1-202ENST00000359544 LSRQ86X29 649 aaPredicted RBP13.53□□□□□ -0.24
UBAP1-202ENST00000359544 WDSUB1Q8N9V3 476 aa13.53□□□□□ -0.24
UBAP1-202ENST00000359544 OR4K17Q8NGC6 315 aa13.53□□□□□ -0.24
UBAP1-202ENST00000359544 GRHL3Q8TE85 626 aa13.53□□□□□ -0.24
UBAP1-202ENST00000359544 IRF7Q92985 503 aa13.53□□□□□ -0.24
UBAP1-202ENST00000359544 C14orf79Q96F83 325 aa13.53□□□□□ -0.24
UBAP1-202ENST00000359544 SLCO5A1Q9H2Y9 848 aa13.53□□□□□ -0.24
UBAP1-202ENST00000359544 WNT16Q9UBV4 365 aa13.53□□□□□ -0.24
UBAP1-202ENST00000359544 FBXO4Q9UKT5 387 aa13.53□□□□□ -0.24
UBAP1-202ENST00000359544 FRYLO94915 3013 aa13.52□□□□□ -0.24
UBAP1-202ENST00000359544 PSMD9O00233 223 aa13.52□□□□□ -0.24
UBAP1-202ENST00000359544 STATHP02808 62 aa13.52□□□□□ -0.24
UBAP1-202ENST00000359544 AGAP20933 346 aa13.52□□□□□ -0.24
UBAP1-202ENST00000359544 BCL6P41182 706 aa13.52□□□□□ -0.24
UBAP1-202ENST00000359544 POU3F4P49335 361 aa13.52□□□□□ -0.24
UBAP1-202ENST00000359544 EFNB2P52799 333 aa13.52□□□□□ -0.24
UBAP1-202ENST00000359544 PRDX1Q06830 199 aaKnown RBP13.52□□□□□ -0.24
UBAP1-202ENST00000359544 FHL1Q13642 323 aa13.52□□□□□ -0.24
UBAP1-202ENST00000359544 MLF2Q15773 248 aaPredicted RBP13.52□□□□□ -0.24
UBAP1-202ENST00000359544 PARS2Q7L3T8 475 aaKnown RBP13.52□□□□□ -0.24
UBAP1-202ENST00000359544 LRRC25Q8N386 305 aaPredicted RBP13.52□□□□□ -0.24
UBAP1-202ENST00000359544 TMEM105Q8N8V8 129 aa13.52□□□□□ -0.24
UBAP1-202ENST00000359544 OR51D1Q8NGF3 324 aa13.52□□□□□ -0.24
UBAP1-202ENST00000359544 FOXRED1Q96CU9 486 aaPredicted RBP13.52□□□□□ -0.24
UBAP1-202ENST00000359544 RHOFQ9HBH0 211 aa13.52□□□□□ -0.24
UBAP1-202ENST00000359544 WSB2Q9NYS7 404 aaPredicted RBP13.52□□□□□ -0.24
UBAP1-202ENST00000359544 ZNF107Q9UII5 783 aaPredicted RBP13.52□□□□□ -0.24
UBAP1-202ENST00000359544 LHX6Q9UPM6 363 aa13.52□□□□□ -0.24
UBAP1-202ENST00000359544 RPH3AQ9Y2J0 694 aaPredicted RBP13.52□□□□□ -0.24
UBAP1-202ENST00000359544 TRBV5-7A0A0A0MS05 114 aa13.52□□□□□ -0.25
UBAP1-202ENST00000359544 TRBV23-1A0A0A0MS06 115 aa13.52□□□□□ -0.25
UBAP1-202ENST00000359544 A0A0B4J2E0 115 aa13.52□□□□□ -0.25
UBAP1-202ENST00000359544 A0A1B0GX12 115 aa13.52□□□□□ -0.25
UBAP1-202ENST00000359544 ZNF729A6NN14 1252 aaPredicted RBP13.52□□□□□ -0.25
UBAP1-202ENST00000359544 TTLL8A6PVC2 850 aa13.52□□□□□ -0.25
UBAP1-202ENST00000359544 SMAD9O15198 467 aaKnown RBP13.52□□□□□ -0.25
UBAP1-202ENST00000359544 OR2T1O43869 369 aa13.52□□□□□ -0.25
UBAP1-202ENST00000359544 RPP14O95059 124 aaKnown RBP13.52□□□□□ -0.25
UBAP1-202ENST00000359544 MT-ND4LP03901 98 aa13.52□□□□□ -0.25
UBAP1-202ENST00000359544 CD14P08571 375 aa13.52□□□□□ -0.25
UBAP1-202ENST00000359544 RCC1P18754 421 aaPredicted RBP13.52□□□□□ -0.25
UBAP1-202ENST00000359544 PGDP52209 483 aa13.52□□□□□ -0.25
UBAP1-202ENST00000359544 STARD6P59095 220 aa13.52□□□□□ -0.25
UBAP1-202ENST00000359544 MESP2Q0VG99 397 aa13.52□□□□□ -0.25
UBAP1-202ENST00000359544 LYG2Q86SG7 212 aa13.52□□□□□ -0.25
UBAP1-202ENST00000359544 ADIPOR2Q86V24 386 aa13.52□□□□□ -0.25
UBAP1-202ENST00000359544 LILRB2Q8N423 598 aa13.52□□□□□ -0.25
UBAP1-202ENST00000359544 THRSPQ92748 146 aa13.52□□□□□ -0.25
UBAP1-202ENST00000359544 HIST1H2BAQ96A08 127 aa13.52□□□□□ -0.25
UBAP1-202ENST00000359544 RNF166Q96A37 237 aaPredicted RBP13.52□□□□□ -0.25
UBAP1-202ENST00000359544 SAT2Q96F10 170 aaPredicted RBP13.52□□□□□ -0.25
UBAP1-202ENST00000359544 PHB2Q99623 299 aa13.52□□□□□ -0.25
UBAP1-202ENST00000359544 COMMD4Q9H0A8 199 aa13.52□□□□□ -0.25
UBAP1-202ENST00000359544 RXFP3Q9NSD7 469 aa13.52□□□□□ -0.25
UBAP1-202ENST00000359544 DMRT1Q9Y5R6 373 aa13.52□□□□□ -0.25
UBAP1-202ENST00000359544 TRAV8-7A0A075B6U6 113 aa13.51□□□□□ -0.25
UBAP1-202ENST00000359544 EIF1AYO14602 144 aaKnown RBP13.51□□□□□ -0.25
UBAP1-202ENST00000359544 APEHP13798 732 aaKnown RBP13.51□□□□□ -0.25
UBAP1-202ENST00000359544 EIF2S3P41091 472 aaKnown RBP13.51□□□□□ -0.25
UBAP1-202ENST00000359544 EIF1AXP47813 144 aaKnown RBP13.51□□□□□ -0.25
UBAP1-202ENST00000359544 CAV2P51636 162 aa13.51□□□□□ -0.25
UBAP1-202ENST00000359544 NR0B2Q15466 257 aa13.51□□□□□ -0.25
UBAP1-202ENST00000359544 SFTPA1Q8IWL2 248 aa13.51□□□□□ -0.25
UBAP1-202ENST00000359544 SAMD14Q8IZD0 417 aaPredicted RBP13.51□□□□□ -0.25
UBAP1-202ENST00000359544 NUDCD2Q8WVJ2 157 aa13.51□□□□□ -0.25
UBAP1-202ENST00000359544 SGK3Q96BR1 496 aa13.51□□□□□ -0.25
UBAP1-202ENST00000359544 CPNE2Q96FN4 548 aaPredicted RBP13.51□□□□□ -0.25
UBAP1-202ENST00000359544 Q96M85 177 aa13.51□□□□□ -0.25
UBAP1-202ENST00000359544 MNTQ99583 582 aa13.51□□□□□ -0.25
UBAP1-202ENST00000359544 SEMA6CQ9H3T2 930 aa13.51□□□□□ -0.25
UBAP1-202ENST00000359544 C6orf106Q9H6K1 298 aaPredicted RBP13.51□□□□□ -0.25
UBAP1-202ENST00000359544 LPAR3Q9UBY5 353 aa13.51□□□□□ -0.25
UBAP1-202ENST00000359544 PCOLCE2Q9UKZ9 415 aa13.51□□□□□ -0.25
UBAP1-202ENST00000359544 SLC22A7Q9Y694 548 aa13.51□□□□□ -0.25
UBAP1-202ENST00000359544 IGKV1-8A0A0C4DH67 115 aa13.51□□□□□ -0.25
UBAP1-202ENST00000359544 LOC100289279A0A1B0GTE1 492 aa13.51□□□□□ -0.25
UBAP1-202ENST00000359544 TXNL1O43396 289 aa13.51□□□□□ -0.25
UBAP1-202ENST00000359544 GLCEO94923 617 aa13.51□□□□□ -0.25
UBAP1-202ENST00000359544 CYB5AP00167 134 aa13.51□□□□□ -0.25
UBAP1-202ENST00000359544 SFTA3P0C7M3 94 aa13.51□□□□□ -0.25
UBAP1-202ENST00000359544 PGAM2P15259 253 aa13.51□□□□□ -0.25
UBAP1-202ENST00000359544 MUC1P15941 1255 aaPredicted RBP13.51□□□□□ -0.25
UBAP1-202ENST00000359544 ZNF14P17017 642 aaPredicted RBP13.51□□□□□ -0.25
UBAP1-202ENST00000359544 PMELP40967 661 aa13.51□□□□□ -0.25
UBAP1-202ENST00000359544 RUNX3Q13761 415 aa13.51□□□□□ -0.25
UBAP1-202ENST00000359544 RAB11BQ15907 218 aa13.51□□□□□ -0.25
UBAP1-202ENST00000359544 Q3ZCU0 254 aa13.51□□□□□ -0.25
UBAP1-202ENST00000359544 FNDC3BQ53EP0 1204 aaKnown RBP13.51□□□□□ -0.25
UBAP1-202ENST00000359544 DCST2Q5T1A1 773 aa13.51□□□□□ -0.25
UBAP1-202ENST00000359544 OR10K2Q6IF99 312 aa13.51□□□□□ -0.25
UBAP1-202ENST00000359544 ZNF595Q8IYB9 648 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms