RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 SIRT5Q9NXA8 310 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 NTMQ9P121 344 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 ZNF337Q9Y3M9 751 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 KMT2EQ8IZD2 1858 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 DVL1P1P54792 670 aaPredicted RBP5.6□□□□□ -1.51
VPS13B-203ENST00000358544 GLYATL3Q5SZD4 288 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 AFMIDQ63HM1 303 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 ACSM5Q6NUN0 579 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 SGPP1Q9BX95 441 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 DMRT1Q9Y5R6 373 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 TRBV23-1A0A0A0MS06 115 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 ZNF43P17038 809 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 KITLGP21583 273 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 PPIAP62937 165 aaKnown RBP5.6□□□□□ -1.51
VPS13B-203ENST00000358544 TEAD2Q15562 447 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 PRAMEF8Q5VWM4 474 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 PRAMEF7Q5VXH5 474 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 TMEM207Q6UWW9 146 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 UEVLDQ8IX04 471 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 MUC20Q8N307 709 aaPredicted RBP5.6□□□□□ -1.51
VPS13B-203ENST00000358544 SLC7A11Q9UPY5 501 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 KCNK6Q9Y257 313 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 TMEM269A0A1B0GVZ9 245 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 NUDT21O43809 227 aaKnown RBP5.6□□□□□ -1.51
VPS13B-203ENST00000358544 DDTP30046 118 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 CXCL17Q6UXB2 119 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 LRRTM3Q86VH5 581 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 ARL6IP6Q8N6S5 226 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 C2orf50Q96LR7 162 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 UHRF2Q96PU4 802 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 VAMP8Q9BV40 100 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 SLC35B3Q9H1N7 401 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 KLRF1Q9NZS2 232 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 LAMB1P07942 1786 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 TRAV1-2A0A0B4J238 106 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 TMEM115Q12893 351 aaPredicted RBP5.6□□□□□ -1.51
VPS13B-203ENST00000358544 ENTPD8Q5MY95 495 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 MSRAQ9UJ68 235 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 YIPF1Q9Y548 306 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 RAB27BO00194 218 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 TK1P04183 234 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 ATF1P18846 271 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 CRABP1P29762 137 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 FGF9P31371 208 aaPredicted RBP5.6□□□□□ -1.51
VPS13B-203ENST00000358544 THBS3P49746 956 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 ELOCQ15369 112 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 TMEM217Q8N7C4 229 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 FAM3CQ92520 227 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 ELOVL1Q9BW60 279 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 OR10A5Q9H207 317 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 OR10A2Q9H208 303 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 ZDHHC11Q9H8X9 412 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 RYDENQ9NUL5 291 aaKnown RBP5.6□□□□□ -1.51
VPS13B-203ENST00000358544 ADAM11O75078 769 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 EIF3GO75821 320 aaKnown RBP eCLIP5.6□□□□□ -1.51
VPS13B-203ENST00000358544 PRSS23O95084 383 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 ZNF528Q3MIS6 628 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 C6orf132Q5T0Z8 1188 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 C12orf73Q69YU5 71 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 NHLRC1Q6VVB1 395 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 RNF113BQ8IZP6 322 aaKnown RBP5.6□□□□□ -1.51
VPS13B-203ENST00000358544 FBXO17Q96EF6 278 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 FAM71F1Q96KD3 344 aaPredicted RBP5.6□□□□□ -1.51
VPS13B-203ENST00000358544 A0A1W2PPV4 95 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 F6UZH7 168 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 AQP7O14520 342 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 GSTZ1O43708 216 aaPredicted RBP5.6□□□□□ -1.51
VPS13B-203ENST00000358544 LEFTY1O75610 366 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 SHC2P98077 582 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 PLA1AQ53H76 456 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 OR11H7Q8NGC8 314 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 GJD4Q96KN9 370 aaPredicted RBP5.6□□□□□ -1.51
VPS13B-203ENST00000358544 TMEM121BQ9BXQ6 578 aaPredicted RBP5.6□□□□□ -1.51
VPS13B-203ENST00000358544 UQCC1Q9NVA1 299 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 H7C1C5 153 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 PLA2G10O15496 165 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 RPL12P30050 165 aaKnown RBP5.6□□□□□ -1.51
VPS13B-203ENST00000358544 RING1Q06587 406 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 PMPCAQ10713 525 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 PPP1R1CQ8WVI7 109 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 TVP23CQ96ET8 276 aa5.6□□□□□ -1.51
VPS13B-203ENST00000358544 IGKV6-21A0A0C4DH24 114 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 MCRIP1C9JLW8 97 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 JMJD7P0C870 316 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 TLE1Q04724 770 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 SGCAQ16586 387 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 WBP2NLQ6ICG8 309 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 GPR142Q7Z601 462 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 C11orf42Q8N5U0 333 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 NKAIN3Q8N8D7 197 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 ANKRD9Q96BM1 317 aaPredicted RBP5.59□□□□□ -1.51
VPS13B-203ENST00000358544 BMFQ96LC9 184 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 IL36AQ9UHA7 158 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 CEP295Q9C0D2 2601 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 PDX1P52945 283 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 LGALSLQ3ZCW2 172 aaPredicted RBP5.59□□□□□ -1.51
VPS13B-203ENST00000358544 C11orf87Q6NUJ2 197 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 LRRTM4Q86VH4 590 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 SLC43A2Q8N370 569 aa5.59□□□□□ -1.51
VPS13B-203ENST00000358544 STT3BQ8TCJ2 826 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms