RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 ALDH16A1Q8IZ83 802 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 TEX29Q8N6K0 151 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 NOXO1Q8NFA2 376 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 OR8J3Q8NGG0 315 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 OR1J1Q8NGS3 322 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 OR51F2Q8NH61 342 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 CLDND2Q8NHS1 167 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 TMEM255BQ8WV15 326 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 ASB10Q8WXI3 467 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 TMEM186Q96B77 213 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 TPD52L3Q96J77 140 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 RBP7Q96R05 134 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 TMEM120AQ9BXJ8 343 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 MRPL13Q9BYD1 178 aaKnown RBP9.13□□□□□ -0.95
CAPN3-204ENST00000356316 SIAEQ9HAT2 523 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 LPAR2Q9HBW0 351 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 ZNF275Q9NSD4 429 aaPredicted RBP9.13□□□□□ -0.95
CAPN3-204ENST00000356316 HIF1ANQ9NWT6 349 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 TREM2Q9NZC2 230 aa9.13□□□□□ -0.95
CAPN3-204ENST00000356316 MYEF2Q9P2K5 600 aaKnown RBP9.13□□□□□ -0.95
CAPN3-204ENST00000356316 STAB1Q9NY15 2570 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 PLSCR5A0PG75 271 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 HTR3EA5X5Y0 456 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 BBIP1A8MTZ0 92 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 FBP2O00757 339 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 SHOX2O60902 331 aaPredicted RBP9.12□□□□□ -0.95
CAPN3-204ENST00000356316 TRMUO75648 421 aaKnown RBP9.12□□□□□ -0.95
CAPN3-204ENST00000356316 CLPTM1O96005 669 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 IGF2P01344 180 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 MSMBP08118 114 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 STOMP27105 288 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 AQP2P41181 271 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 CRYBB2P43320 205 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 MAGEB1P43366 347 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 OR1E2P47887 323 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 GZMMP51124 257 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 ARFIP2P53365 341 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 RUNX1T1Q06455 604 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 ST3GAL3Q11203 375 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 HFEQ30201 348 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 ZNF718Q3SXZ3 478 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 CYBRD1Q53TN4 286 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 RABL3Q5HYI8 236 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 COQ5Q5HYK3 327 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 PABPC1L2AQ5JQF8 200 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 ACSM5Q6NUN0 579 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 FAHD2BQ6P2I3 314 aaPredicted RBP9.12□□□□□ -0.95
CAPN3-204ENST00000356316 TSPYL5Q86VY4 417 aaPredicted RBP9.12□□□□□ -0.95
CAPN3-204ENST00000356316 NKAIN4Q8IVV8 208 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 C1orf174Q8IYL3 243 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 PAQR4Q8N4S7 273 aaPredicted RBP9.12□□□□□ -0.95
CAPN3-204ENST00000356316 PFN4Q8NHR9 129 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 FNDC8Q8TC99 324 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 C10orf82Q8WW14 230 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 LZICQ8WZA0 190 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 NSMAFQ92636 917 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 YIPF5Q969M3 257 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 FAHD2AQ96GK7 314 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 TIMD4Q96H15 378 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 LRRC37BQ96QE4 947 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 METTL17Q9H7H0 456 aaPredicted RBP9.12□□□□□ -0.95
CAPN3-204ENST00000356316 SMURF2Q9HAU4 748 aa9.12□□□□□ -0.95
CAPN3-204ENST00000356316 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.12□□□□□ -0.95
CAPN3-204ENST00000356316 IGLV3-9A0A075B6K5 115 aa9.11□□□□□ -0.95
CAPN3-204ENST00000356316 TRAV20A0A0B4J274 112 aa9.11□□□□□ -0.95
CAPN3-204ENST00000356316 IGHV1-69-2A0A0G2JMI3 117 aa9.11□□□□□ -0.95
CAPN3-204ENST00000356316 LOC100653049A0A140TA62 436 aa9.11□□□□□ -0.95
CAPN3-204ENST00000356316 MRASO14807 208 aa9.11□□□□□ -0.95
CAPN3-204ENST00000356316 KRT34O76011 436 aa9.11□□□□□ -0.95
CAPN3-204ENST00000356316 GAAP10253 952 aa9.11□□□□□ -0.95
CAPN3-204ENST00000356316 TNFRSF1BP20333 461 aa9.11□□□□□ -0.95
CAPN3-204ENST00000356316 GDI2P50395 445 aaKnown RBP9.11□□□□□ -0.95
CAPN3-204ENST00000356316 SELENOWP63302 87 aa9.11□□□□□ -0.95
CAPN3-204ENST00000356316 MRPS34P82930 218 aaKnown RBP9.11□□□□□ -0.95
CAPN3-204ENST00000356316 MVKQ03426 396 aa9.11□□□□□ -0.95
CAPN3-204ENST00000356316 KLF10Q13118 480 aa9.11□□□□□ -0.95
CAPN3-204ENST00000356316 TAF11Q15544 211 aa9.11□□□□□ -0.95
CAPN3-204ENST00000356316 TSTQ16762 297 aaKnown RBP9.11□□□□□ -0.95
CAPN3-204ENST00000356316 LRRC23Q53EV4 343 aaPredicted RBP9.11□□□□□ -0.95
CAPN3-204ENST00000356316 ALG10Q5BKT4 473 aa9.11□□□□□ -0.95
CAPN3-204ENST00000356316 THEM4Q5T1C6 240 aa9.11□□□□□ -0.95
CAPN3-204ENST00000356316 C10orf128Q5T292 105 aa9.11□□□□□ -0.95
CAPN3-204ENST00000356316 ARMC4Q5T2S8 1044 aa9.11□□□□□ -0.95
CAPN3-204ENST00000356316 ARL9Q6T311 187 aa9.11□□□□□ -0.95
CAPN3-204ENST00000356316 CALHM3Q86XJ0 350 aa9.11□□□□□ -0.95
CAPN3-204ENST00000356316 TREML1Q86YW5 311 aa9.11□□□□□ -0.95
CAPN3-204ENST00000356316 CPEB3Q8NE35 698 aaKnown RBP9.11□□□□□ -0.95
CAPN3-204ENST00000356316 MOSPD2Q8NHP6 518 aa9.11□□□□□ -0.95
CAPN3-204ENST00000356316 LIPHQ8WWY8 451 aa9.11□□□□□ -0.95
CAPN3-204ENST00000356316 RAB1CQ92928 201 aa9.11□□□□□ -0.95
CAPN3-204ENST00000356316 RAB39BQ96DA2 213 aa9.11□□□□□ -0.95
CAPN3-204ENST00000356316 BPIFA2Q96DR5 249 aa9.11□□□□□ -0.95
CAPN3-204ENST00000356316 ZNF583Q96ND8 569 aa9.11□□□□□ -0.95
CAPN3-204ENST00000356316 SEPHS2Q99611 448 aa9.11□□□□□ -0.95
CAPN3-204ENST00000356316 EGLN1Q9GZT9 426 aa9.11□□□□□ -0.95
CAPN3-204ENST00000356316 RACGAP1Q9H0H5 632 aa9.11□□□□□ -0.95
CAPN3-204ENST00000356316 TXNIPQ9H3M7 391 aa9.11□□□□□ -0.95
CAPN3-204ENST00000356316 C20orf141Q9NUB4 165 aa9.11□□□□□ -0.95
CAPN3-204ENST00000356316 NKIRAS2Q9NYR9 191 aa9.11□□□□□ -0.95
CAPN3-204ENST00000356316 A0A0A6YYJ9 748 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms