RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.19□□□□□ -1.42
VPS13A-201ENST00000355766 CRYZQ08257 329 aaKnown RBP6.19□□□□□ -1.42
VPS13A-201ENST00000355766 C1DQ13901 141 aaKnown RBP6.19□□□□□ -1.42
VPS13A-201ENST00000355766 FHL2Q14192 279 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 QPRTQ15274 297 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 SNAPC1Q16533 368 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 SLC25A35Q3KQZ1 300 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 GLYR1Q49A26 553 aaPredicted RBP6.19□□□□□ -1.42
VPS13A-201ENST00000355766 FAM69AQ5T7M9 428 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 AADACL4Q5VUY2 407 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 FAM205BPQ63HN1 556 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 GPR139Q6DWJ6 353 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 CBLN3Q6UW01 205 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 APOOLQ6UXV4 268 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 LINC00299Q6ZSB3 139 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 AHSA2Q719I0 299 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 SLC46A3Q7Z3Q1 461 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 ADCK1Q86TW2 530 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 SATL1Q86VE3 508 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 FADS6Q8N9I5 356 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 OR8D4Q8NGM9 314 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 OR5M3Q8NGP4 307 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 ZNF563Q8TA94 476 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 HAVCR2Q8TDQ0 301 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 GPR119Q8TDV5 335 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 CFHR4Q92496 578 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 TMEM41AQ96HV5 264 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 LRR1Q96L50 414 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 IL4I1Q96RQ9 567 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 TSSK6Q9BXA6 273 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 POTEKPQ9BYX7 375 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 PLA2G12AQ9BZM1 189 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 PTGES2Q9H7Z7 377 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 FGF20Q9NP95 211 aaPredicted RBP6.19□□□□□ -1.42
VPS13A-201ENST00000355766 ISYNA1Q9NPH2 558 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 ACOT13Q9NPJ3 140 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 NRIP3Q9NQ35 241 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 CTPS2Q9NRF8 586 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 C20orf141Q9NUB4 165 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 BEX4Q9NWD9 120 aaPredicted RBP6.19□□□□□ -1.42
VPS13A-201ENST00000355766 PAK1IP1Q9NWT1 392 aaPredicted RBP6.19□□□□□ -1.42
VPS13A-201ENST00000355766 TAS2R10Q9NYW0 307 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 SEC14L4Q9UDX3 406 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 RSL24D1Q9UHA3 163 aaKnown RBP6.19□□□□□ -1.42
VPS13A-201ENST00000355766 CDC42EP3Q9UKI2 254 aa6.19□□□□□ -1.42
VPS13A-201ENST00000355766 CHCHD2Q9Y6H1 151 aaPredicted RBP6.19□□□□□ -1.42
VPS13A-201ENST00000355766 ZNF99A8MXY4 864 aaPredicted RBP6.18□□□□□ -1.42
VPS13A-201ENST00000355766 SLC22A1O15245 554 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 SEC14L5O43304 696 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 DNPH1O43598 174 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 TLX2O43763 284 aaPredicted RBP6.18□□□□□ -1.42
VPS13A-201ENST00000355766 AHCYL1O43865 530 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 XPNPEP2O43895 674 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 PRKYO43930 277 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 PRKNO60260 465 aaPredicted RBP6.18□□□□□ -1.42
VPS13A-201ENST00000355766 PIP5K1CO60331 668 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 TRMUO75648 421 aaKnown RBP6.18□□□□□ -1.42
VPS13A-201ENST00000355766 RAB36O95755 333 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 MPIG6BO95866 241 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 IGHMP01871 453 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 MYL12AP19105 171 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 CD53P19397 219 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 CXCR1P25024 350 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 TACR3P29371 465 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 UQCRC1P31930 480 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 RFC3P40938 356 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 CASP3P42574 277 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 MTNR1AP48039 350 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 BLVRAP53004 296 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 SLC25A1P53007 311 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 CDH15P55291 814 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 FBXW4P57775 412 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 FXYD6P3P58550 94 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 SUMO1P63165 101 aaKnown RBP6.18□□□□□ -1.42
VPS13A-201ENST00000355766 ACTC1P68032 377 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 ACTA1P68133 377 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 BDH1Q02338 343 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 EMX1Q04741 257 aaPredicted RBP6.18□□□□□ -1.42
VPS13A-201ENST00000355766 LGALS3BPQ08380 585 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 ST3GAL4Q11206 333 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 FHL1Q13642 323 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 SNTB1Q13884 538 aaKnown RBP6.18□□□□□ -1.42
VPS13A-201ENST00000355766 GGTLC2Q14390 218 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 RAB39AQ14964 217 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 SGCBQ16585 318 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 ZNF239Q16600 458 aaKnown RBP6.18□□□□□ -1.42
VPS13A-201ENST00000355766 TIMM50Q3ZCQ8 353 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 SLC35D3Q5M8T2 416 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 Q5PR19 223 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 LCN1P1Q5VSP4 162 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 C3orf33Q6P1S2 294 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 HDDC2Q7Z4H3 204 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 MARCH3Q86UD3 253 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 RPS19BP1Q86WX3 136 aaKnown RBP6.18□□□□□ -1.42
VPS13A-201ENST00000355766 PRR22Q8IZ63 422 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 CIARTQ8N365 385 aaPredicted RBP6.18□□□□□ -1.42
VPS13A-201ENST00000355766 STX19Q8N4C7 294 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 TCEANCQ8N8B7 351 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 POMGNT2Q8NAT1 580 aa6.18□□□□□ -1.42
VPS13A-201ENST00000355766 PSD4Q8NDX1 1056 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms