RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 ARPC1BO15143 372 aaKnown RBP4.96□□□□□ -1.62
CD47-201ENST00000355354 DNAJB5O75953 348 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 NXPH3O95157 252 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 SFTPDP35247 375 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 GABRA4P48169 554 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 NHLRC3Q5JS37 347 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 WDR38Q5JTN6 314 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 ZNF343Q6P1L6 599 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 RBMXL3Q8N7X1 1067 aaKnown RBP4.96□□□□□ -1.62
CD47-201ENST00000355354 FBXO15Q8NCQ5 510 aaPredicted RBP4.96□□□□□ -1.62
CD47-201ENST00000355354 OR1J4Q8NGS1 313 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 TMEM230Q96A57 120 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 TMEM159Q96B96 161 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 OR10C1Q96KK4 312 aa4.96□□□□□ -1.62
CD47-201ENST00000355354 DNAJB12Q9NXW2 375 aaKnown RBP4.96□□□□□ -1.62
CD47-201ENST00000355354 IGKV1-27A0A075B6S5 117 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 AHRRA9YTQ3 701 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 C9orf172C9J069 976 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 SOCS1O15524 211 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 PLATP00750 562 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 PER3P56645 1201 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 RBM39Q14498 530 aaKnown RBP4.95□□□□□ -1.62
CD47-201ENST00000355354 OR1Q1Q15612 314 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 GGTA1PQ4G0N0 100 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 NSUN5P2Q63ZY6 315 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 THOC7Q6I9Y2 204 aaKnown RBP4.95□□□□□ -1.62
CD47-201ENST00000355354 ERN2Q76MJ5 926 aaKnown RBP4.95□□□□□ -1.62
CD47-201ENST00000355354 SSX7Q7RTT5 188 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 LURAP1LQ8IV03 231 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 UXS1Q8NBZ7 420 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 DENND6BQ8NEG7 585 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 OR6M1Q8NGM8 313 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 BPIFA2Q96DR5 249 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 MRPS24Q96EL2 167 aaKnown RBP4.95□□□□□ -1.62
CD47-201ENST00000355354 RSRP1Q9BUV0 290 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 HES7Q9BYE0 225 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 OR5AC2Q9NZP5 309 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 PAIP2BQ9ULR5 123 aaKnown RBP4.95□□□□□ -1.62
CD47-201ENST00000355354 NPFFR2Q9Y5X5 522 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 OR4C45A6NMZ5 311 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 DHRS7CA6NNS2 312 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 ATP6V1G2-DDX39BF2Z307 99 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 SPDEFO95238 335 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 NR2F1P10589 423 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 NAT2P11245 290 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 EIF1AXP47813 144 aaKnown RBP4.95□□□□□ -1.62
CD47-201ENST00000355354 IL18Q14116 193 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 KLHL22Q53GT1 634 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.95□□□□□ -1.62
CD47-201ENST00000355354 PM20D2Q8IYS1 436 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 OR4C16Q8NGL9 310 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 OR2L2Q8NH16 312 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 WDR34Q96EX3 536 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 CNDP2Q96KP4 475 aaKnown RBP4.95□□□□□ -1.62
CD47-201ENST00000355354 VSTM2LQ96N03 204 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 SLC6A7Q99884 636 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 SEC61A2Q9H9S3 476 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 RPRD1BQ9NQG5 326 aaKnown RBP4.95□□□□□ -1.62
CD47-201ENST00000355354 P4HTMQ9NXG6 502 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 B3GNT3Q9Y2A9 372 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 PPIAL4AQ9Y536 164 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 A0A087WV62 115 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 A0A0G2JRQ6 117 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 C7orf66A4D0T2 115 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 ABCD4O14678 606 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 POP4O95707 220 aaKnown RBP4.95□□□□□ -1.62
CD47-201ENST00000355354 IFNW1P05000 195 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 BMP5P22003 454 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 GABRA3P34903 492 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 GRK6P43250 576 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 CCR4P51679 360 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 ATP1B3P54709 279 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 PRKCDQ05655 676 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 FOXC1Q12948 553 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 ZFP69Q49AA0 526 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 SPRNQ5BIV9 151 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 UNQ9370/PRO34162Q6UXP9 181 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 ZNF227Q86WZ6 799 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 CALHM1Q8IU99 346 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 OR52N4Q8NGI2 321 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 DUSP19Q8WTR2 217 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 TMEM106AQ96A25 262 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 RNF126Q9BV68 326 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 BANF2Q9H503 90 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 OR2M5A3KFT3 312 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 CASKO14936 926 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 ANGPTL7O43827 346 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 RAF1P04049 648 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 GDNFP39905 211 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 ACTR1BP42025 376 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 ACTR1AP61163 376 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 AP1S1P61966 158 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 ELAVL3Q14576 367 aaKnown RBP4.95□□□□□ -1.62
CD47-201ENST00000355354 TESK1Q15569 626 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 PYDC2Q56P42 97 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 SLC25A25Q6KCM7 469 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 MED27Q6P2C8 311 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 OR2AE1Q8NHA4 323 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 ZFAND1Q8TCF1 268 aa4.95□□□□□ -1.62
CD47-201ENST00000355354 PEX13Q92968 403 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms