RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 ARID1BQ8NFD5 2236 aaPredicted RBP19.9■□□□□ 0.78
UPF3A-201ENST00000351487 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.9■□□□□ 0.78
UPF3A-201ENST00000351487 G3V3Q6 166 aa19.9■□□□□ 0.78
UPF3A-201ENST00000351487 CTAG2O75638 210 aa19.9■□□□□ 0.78
UPF3A-201ENST00000351487 NDUFB6O95139 128 aa19.9■□□□□ 0.78
UPF3A-201ENST00000351487 CPN1P15169 458 aa19.9■□□□□ 0.78
UPF3A-201ENST00000351487 BCKDHBP21953 392 aa19.9■□□□□ 0.78
UPF3A-201ENST00000351487 CRABP1P29762 137 aa19.9■□□□□ 0.78
UPF3A-201ENST00000351487 ETFDHQ16134 617 aa19.9■□□□□ 0.78
UPF3A-201ENST00000351487 OTPQ5XKR4 325 aa19.9■□□□□ 0.78
UPF3A-201ENST00000351487 ASPHD2Q6ICH7 369 aa19.9■□□□□ 0.78
UPF3A-201ENST00000351487 TEX261Q6UWH6 196 aa19.9■□□□□ 0.78
UPF3A-201ENST00000351487 ZNF454Q8N9F8 522 aa19.9■□□□□ 0.78
UPF3A-201ENST00000351487 HEXA-AS1Q9H8Q6 139 aa19.9■□□□□ 0.78
UPF3A-201ENST00000351487 SLC22A13Q9Y226 551 aa19.9■□□□□ 0.78
UPF3A-201ENST00000351487 U3KQ87 197 aa19.9■□□□□ 0.78
UPF3A-201ENST00000351487 GGT3PA6NGU5 568 aa19.9■□□□□ 0.78
UPF3A-201ENST00000351487 SLC17A2O00624 439 aa19.9■□□□□ 0.78
UPF3A-201ENST00000351487 ICMTO60725 284 aa19.9■□□□□ 0.78
UPF3A-201ENST00000351487 ITGA5P08648 1049 aa19.9■□□□□ 0.78
UPF3A-201ENST00000351487 AFF3P51826 1226 aaKnown RBP19.9■□□□□ 0.78
UPF3A-201ENST00000351487 GLO1Q04760 184 aa19.9■□□□□ 0.78
UPF3A-201ENST00000351487 IKZF1Q13422 519 aa19.9■□□□□ 0.78
UPF3A-201ENST00000351487 FAM166AQ6J272 317 aa19.9■□□□□ 0.78
UPF3A-201ENST00000351487 RHBDD2Q6NTF9 364 aa19.9■□□□□ 0.78
UPF3A-201ENST00000351487 KRT77Q7Z794 578 aa19.9■□□□□ 0.78
UPF3A-201ENST00000351487 OR51D1Q8NGF3 324 aa19.9■□□□□ 0.78
UPF3A-201ENST00000351487 OR8H1Q8NGG4 311 aa19.9■□□□□ 0.78
UPF3A-201ENST00000351487 ST8SIA1Q92185 356 aa19.9■□□□□ 0.78
UPF3A-201ENST00000351487 TTC9Q92623 222 aa19.9■□□□□ 0.78
UPF3A-201ENST00000351487 RADILQ96JH8 1075 aa19.9■□□□□ 0.78
UPF3A-201ENST00000351487 ABHD6Q9BV23 337 aa19.9■□□□□ 0.78
UPF3A-201ENST00000351487 IRF2BPLQ9H1B7 796 aa19.9■□□□□ 0.78
UPF3A-201ENST00000351487 TTYH1Q9H313 450 aaPredicted RBP19.9■□□□□ 0.78
UPF3A-201ENST00000351487 UBE2ZQ9H832 354 aaPredicted RBP19.9■□□□□ 0.78
UPF3A-201ENST00000351487 SLC17A5Q9NRA2 495 aa19.9■□□□□ 0.78
UPF3A-201ENST00000351487 A0A0C4DFX4 3053 aa19.89■□□□□ 0.77
UPF3A-201ENST00000351487 IGLV3-12A0A075B6K2 115 aa19.89■□□□□ 0.77
UPF3A-201ENST00000351487 H3BSH0 61 aa19.89■□□□□ 0.77
UPF3A-201ENST00000351487 BCAT2O15382 392 aaPredicted RBP19.89■□□□□ 0.77
UPF3A-201ENST00000351487 TSC22D2O75157 780 aa19.89■□□□□ 0.77
UPF3A-201ENST00000351487 ALDOBP05062 364 aa19.89■□□□□ 0.77
UPF3A-201ENST00000351487 SELENOPP49908 381 aa19.89■□□□□ 0.77
UPF3A-201ENST00000351487 RIDAP52758 137 aaKnown RBP19.89■□□□□ 0.77
UPF3A-201ENST00000351487 MELKQ14680 651 aa19.89■□□□□ 0.77
UPF3A-201ENST00000351487 FAAP20Q6NZ36 180 aa19.89■□□□□ 0.77
UPF3A-201ENST00000351487 MAMSTRQ6ZN01 415 aa19.89■□□□□ 0.77
UPF3A-201ENST00000351487 STT3BQ8TCJ2 826 aa19.89■□□□□ 0.77
UPF3A-201ENST00000351487 NUDT22Q9BRQ3 303 aa19.89■□□□□ 0.77
UPF3A-201ENST00000351487 DIABLOQ9NR28 239 aa19.89■□□□□ 0.77
UPF3A-201ENST00000351487 ANKUB1A6NFN9 424 aa19.88■□□□□ 0.77
UPF3A-201ENST00000351487 IL5P05113 134 aa19.88■□□□□ 0.77
UPF3A-201ENST00000351487 MYF5P13349 255 aa19.88■□□□□ 0.77
UPF3A-201ENST00000351487 FAUP35544 74 aaKnown RBP19.88■□□□□ 0.77
UPF3A-201ENST00000351487 POU3F4P49335 361 aa19.88■□□□□ 0.77
UPF3A-201ENST00000351487 MAP2K6P52564 334 aa19.88■□□□□ 0.77
UPF3A-201ENST00000351487 MFGE8Q08431 387 aaPredicted RBP19.88■□□□□ 0.77
UPF3A-201ENST00000351487 NLRC3Q7RTR2 1065 aa19.88■□□□□ 0.77
UPF3A-201ENST00000351487 CATSPERDQ86XM0 798 aa19.88■□□□□ 0.77
UPF3A-201ENST00000351487 SPICQ8N5J4 248 aa19.88■□□□□ 0.77
UPF3A-201ENST00000351487 APCDD1LQ8NCL9 501 aa19.88■□□□□ 0.77
UPF3A-201ENST00000351487 OR52N5Q8NH56 324 aa19.88■□□□□ 0.77
UPF3A-201ENST00000351487 PIGKQ92643 395 aa19.88■□□□□ 0.77
UPF3A-201ENST00000351487 METTL17Q9H7H0 456 aaPredicted RBP19.88■□□□□ 0.77
UPF3A-201ENST00000351487 TAS2R8Q9NYW2 309 aa19.88■□□□□ 0.77
UPF3A-201ENST00000351487 LRP12Q9Y561 859 aa19.88■□□□□ 0.77
UPF3A-201ENST00000351487 RBBP9O75884 186 aa19.88■□□□□ 0.77
UPF3A-201ENST00000351487 IFNGR1P15260 489 aa19.88■□□□□ 0.77
UPF3A-201ENST00000351487 FSTP19883 344 aa19.88■□□□□ 0.77
UPF3A-201ENST00000351487 RAD52P43351 418 aa19.88■□□□□ 0.77
UPF3A-201ENST00000351487 SUMO3P55854 103 aaPredicted RBP19.88■□□□□ 0.77
UPF3A-201ENST00000351487 DLX5P56178 289 aa19.88■□□□□ 0.77
UPF3A-201ENST00000351487 STARD6P59095 220 aa19.88■□□□□ 0.77
UPF3A-201ENST00000351487 PUDPQ08623 228 aa19.88■□□□□ 0.77
UPF3A-201ENST00000351487 ZP4Q12836 540 aa19.88■□□□□ 0.77
UPF3A-201ENST00000351487 EIF2B1Q14232 305 aaKnown RBP19.88■□□□□ 0.77
UPF3A-201ENST00000351487 TOMM20Q15388 145 aa19.88■□□□□ 0.77
UPF3A-201ENST00000351487 RAB11BQ15907 218 aa19.88■□□□□ 0.77
UPF3A-201ENST00000351487 LGALSLQ3ZCW2 172 aaPredicted RBP19.88■□□□□ 0.77
UPF3A-201ENST00000351487 OR7E24Q6IFN5 339 aa19.88■□□□□ 0.77
UPF3A-201ENST00000351487 SLC25A25Q6KCM7 469 aa19.88■□□□□ 0.77
UPF3A-201ENST00000351487 SHISA6Q6ZSJ9 500 aa19.88■□□□□ 0.77
UPF3A-201ENST00000351487 OR2T35Q8NGX2 323 aa19.88■□□□□ 0.77
UPF3A-201ENST00000351487 NXPE2Q96DL1 559 aa19.88■□□□□ 0.77
UPF3A-201ENST00000351487 SORCS2Q96PQ0 1159 aa19.88■□□□□ 0.77
UPF3A-201ENST00000351487 PCDHGA5Q9Y5G8 931 aa19.88■□□□□ 0.77
UPF3A-201ENST00000351487 ADAMTS9Q9P2N4 1935 aa19.88■□□□□ 0.77
UPF3A-201ENST00000351487 IGHV3-20A0A0C4DH32 117 aa19.87■□□□□ 0.77
UPF3A-201ENST00000351487 LOC100289279A0A1B0GTE1 492 aa19.87■□□□□ 0.77
UPF3A-201ENST00000351487 CIB4A0PJX0 185 aa19.87■□□□□ 0.77
UPF3A-201ENST00000351487 A6NIZ1 184 aa19.87■□□□□ 0.77
UPF3A-201ENST00000351487 SRSF10O75494 262 aaKnown RBP19.87■□□□□ 0.77
UPF3A-201ENST00000351487 WNT11O96014 354 aa19.87■□□□□ 0.77
UPF3A-201ENST00000351487 EFNB2P52799 333 aa19.87■□□□□ 0.77
UPF3A-201ENST00000351487 RAP1BP61224 184 aa19.87■□□□□ 0.77
UPF3A-201ENST00000351487 RAP1AP62834 184 aa19.87■□□□□ 0.77
UPF3A-201ENST00000351487 NDUFAF7Q7L592 441 aa19.87■□□□□ 0.77
UPF3A-201ENST00000351487 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.87■□□□□ 0.77
UPF3A-201ENST00000351487 FAM109AQ8N4B1 249 aa19.87■□□□□ 0.77
UPF3A-201ENST00000351487 ZNF680Q8NEM1 530 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms