RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 HYLS1Q96M11 299 aa5.43□□□□□ -1.54
CLCN3-201ENST00000347613 PLEKHA1Q9HB21 404 aa5.43□□□□□ -1.54
CLCN3-201ENST00000347613 MED29Q9NX70 200 aa5.43□□□□□ -1.54
CLCN3-201ENST00000347613 MSRAQ9UJ68 235 aa5.43□□□□□ -1.54
CLCN3-201ENST00000347613 FBXL21Q9UKT6 434 aa5.43□□□□□ -1.54
CLCN3-201ENST00000347613 PLCL2Q9UPR0 1127 aa5.43□□□□□ -1.54
CLCN3-201ENST00000347613 KALRNO60229 2985 aa5.43□□□□□ -1.54
CLCN3-201ENST00000347613 TCRBV16S1A1N1A0A5B0 115 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 OR5K4A6NMS3 321 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 CLDN4O14493 209 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 FADS1O60427 444 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 RAMP1O60894 148 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 TRIM3O75382 744 aaPredicted RBP5.42□□□□□ -1.54
CLCN3-201ENST00000347613 ARL6IP5O75915 188 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 GLSO94925 669 aaPredicted RBP5.42□□□□□ -1.54
CLCN3-201ENST00000347613 IFI6P09912 130 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 APEHP13798 732 aaKnown RBP5.42□□□□□ -1.54
CLCN3-201ENST00000347613 PSMB1P20618 241 aaKnown RBP5.42□□□□□ -1.54
CLCN3-201ENST00000347613 CD38P28907 300 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 ZNF81P51508 661 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 SLC25A1P53007 311 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 PRPS1P60891 318 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 RAC1P63000 192 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 NSDHLQ15738 373 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 SLC35D3Q5M8T2 416 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 TMEM69Q5SWH9 247 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 FAM166AQ6J272 317 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 OTOSQ8NHW6 89 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 SLC39A7Q92504 469 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 PMEPA1Q969W9 287 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 MIB2Q96AX9 1013 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 C4orf45Q96LM5 186 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 EMC6Q9BV81 110 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 MFRPQ9BY79 579 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 WWTR1Q9GZV5 400 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 EMC7Q9NPA0 242 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 EIF3KQ9UBQ5 218 aaKnown RBP5.42□□□□□ -1.54
CLCN3-201ENST00000347613 LAMP5Q9UJQ1 280 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 COA3Q9Y2R0 106 aaPredicted RBP5.42□□□□□ -1.54
CLCN3-201ENST00000347613 BSNQ9UPA5 3926 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 IGHV1OR21-1A0A087WYE8 117 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 GABARAPH6UMI1 98 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 SCDO00767 359 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 SSNA1O43805 119 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 MTRF1O75570 445 aaKnown RBP5.42□□□□□ -1.54
CLCN3-201ENST00000347613 CD3DP04234 171 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 CD1AP06126 327 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 CCKBRP32239 447 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 SHBQ15464 509 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 GRK1Q15835 563 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 SLC6A19Q695T7 634 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 IGF2-ASQ6U949 168 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 NDUFAF7Q7L592 441 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 FAM219AQ8IW50 185 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 ZNF441Q8N8Z8 693 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 ZNF417Q8TAU3 575 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 ASB5Q8WWX0 329 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 OMA1Q96E52 524 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 CXorf58Q96LI9 332 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 OR2M2Q96R28 347 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 ZNF587Q96SQ5 575 aaPredicted RBP5.42□□□□□ -1.54
CLCN3-201ENST00000347613 ZNF576Q9H609 170 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 MKL2Q9ULH7 1088 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 OR2M5A3KFT3 312 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 FRG2CA6NGY1 282 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 METTL12A8MUP2 240 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 FTCDNL1E5RQL4 147 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 ZNF254O75437 659 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 NUDT14O95848 222 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 DHFRP00374 187 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 LIPCP11150 499 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 ANXA3P12429 323 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 DNASE1P24855 282 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 POU3F4P49335 361 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 CENPAP49450 140 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 MRPL28Q13084 256 aaKnown RBP5.42□□□□□ -1.54
CLCN3-201ENST00000347613 DYRK1AQ13627 763 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 ISXQ2M1V0 245 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 TCTE1Q5JU00 501 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 ARHGAP40Q5TG30 622 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 PTCRAQ6ISU1 281 aaPredicted RBP5.42□□□□□ -1.54
CLCN3-201ENST00000347613 GLDNQ6ZMI3 551 aaPredicted RBP5.42□□□□□ -1.54
CLCN3-201ENST00000347613 DBX2Q6ZNG2 339 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 SYT13Q7L8C5 426 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 LYPD6Q86Y78 171 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 MUC20Q8N307 709 aaPredicted RBP5.42□□□□□ -1.54
CLCN3-201ENST00000347613 GALNT16Q8N428 558 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 APCDD1LQ8NCL9 501 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 OR4S1Q8NGB4 309 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 OR10S1Q8NGN2 331 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 OR1J4Q8NGS1 313 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 NSMAFQ92636 917 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 HGDQ93099 445 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 DACT3Q96B18 629 aaPredicted RBP5.42□□□□□ -1.54
CLCN3-201ENST00000347613 ABHD6Q9BV23 337 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 PDE7BQ9NP56 450 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 TAS2R4Q9NYW5 299 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 MED11Q9P086 117 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 STEAP1Q9UHE8 339 aa5.42□□□□□ -1.54
CLCN3-201ENST00000347613 PFDN2Q9UHV9 154 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms