RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 PROCRQ9UNN8 238 aa16.73■□□□□ 0.27
CHMP4A-201ENST00000347519 MOKQ9UQ07 419 aa16.73■□□□□ 0.27
CHMP4A-201ENST00000347519 A0A1W2PPL8 197 aa16.72■□□□□ 0.27
CHMP4A-201ENST00000347519 HSPB2A8KAH6 182 aa16.72■□□□□ 0.27
CHMP4A-201ENST00000347519 SELENOFO60613 162 aa16.72■□□□□ 0.27
CHMP4A-201ENST00000347519 KRT33AO76009 404 aa16.72■□□□□ 0.27
CHMP4A-201ENST00000347519 CRHBPP24387 322 aa16.72■□□□□ 0.27
CHMP4A-201ENST00000347519 CXCR4P61073 352 aa16.72■□□□□ 0.27
CHMP4A-201ENST00000347519 ADORA2A-AS1P86434 159 aa16.72■□□□□ 0.27
CHMP4A-201ENST00000347519 MVKQ03426 396 aa16.72■□□□□ 0.27
CHMP4A-201ENST00000347519 HSPB2Q16082 182 aa16.72■□□□□ 0.27
CHMP4A-201ENST00000347519 FOXL2NBQ6ZUU3 175 aa16.72■□□□□ 0.27
CHMP4A-201ENST00000347519 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.72■□□□□ 0.27
CHMP4A-201ENST00000347519 SLC26A10Q8NG04 563 aa16.72■□□□□ 0.27
CHMP4A-201ENST00000347519 OR4F15Q8NGB8 312 aa16.72■□□□□ 0.27
CHMP4A-201ENST00000347519 PRR7Q8TB68 274 aa16.72■□□□□ 0.27
CHMP4A-201ENST00000347519 C11orf40Q8WZ69 217 aa16.72■□□□□ 0.27
CHMP4A-201ENST00000347519 RFKQ969G6 155 aa16.72■□□□□ 0.27
CHMP4A-201ENST00000347519 NABP1Q96AH0 204 aa16.72■□□□□ 0.27
CHMP4A-201ENST00000347519 WDR76Q9H967 626 aa16.72■□□□□ 0.27
CHMP4A-201ENST00000347519 ADGRL4Q9HBW9 690 aa16.72■□□□□ 0.27
CHMP4A-201ENST00000347519 B3GAT2Q9NPZ5 323 aa16.72■□□□□ 0.27
CHMP4A-201ENST00000347519 FKBP14Q9NWM8 211 aa16.72■□□□□ 0.27
CHMP4A-201ENST00000347519 MALT1Q9UDY8 824 aa16.72■□□□□ 0.27
CHMP4A-201ENST00000347519 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.72■□□□□ 0.27
CHMP4A-201ENST00000347519 OR6C65A6NJZ3 312 aa16.71■□□□□ 0.27
CHMP4A-201ENST00000347519 SLC22A31A6NKX4 558 aa16.71■□□□□ 0.27
CHMP4A-201ENST00000347519 RPL36A-HNRNPH2H7BZ11 118 aa16.71■□□□□ 0.27
CHMP4A-201ENST00000347519 ITGA5P08648 1049 aa16.71■□□□□ 0.27
CHMP4A-201ENST00000347519 CCDC159P0C7I6 412 aa16.71■□□□□ 0.27
CHMP4A-201ENST00000347519 LAP3P28838 519 aa16.71■□□□□ 0.27
CHMP4A-201ENST00000347519 NAA10P41227 235 aaPredicted RBP16.71■□□□□ 0.27
CHMP4A-201ENST00000347519 RPS27P42677 84 aaKnown RBP16.71■□□□□ 0.27
CHMP4A-201ENST00000347519 MTNR1AP48039 350 aa16.71■□□□□ 0.27
CHMP4A-201ENST00000347519 CHN2P52757 468 aa16.71■□□□□ 0.27
CHMP4A-201ENST00000347519 HCCSP53701 268 aa16.71■□□□□ 0.27
CHMP4A-201ENST00000347519 ARF1P84077 181 aaKnown RBP16.71■□□□□ 0.27
CHMP4A-201ENST00000347519 GGTLC2Q14390 218 aa16.71■□□□□ 0.27
CHMP4A-201ENST00000347519 RBM48Q5RL73 367 aaKnown RBP16.71■□□□□ 0.27
CHMP4A-201ENST00000347519 GLB1L2Q8IW92 636 aa16.71■□□□□ 0.27
CHMP4A-201ENST00000347519 TIGD4Q8IY51 512 aa16.71■□□□□ 0.27
CHMP4A-201ENST00000347519 RELL2Q8NC24 303 aaPredicted RBP16.71■□□□□ 0.27
CHMP4A-201ENST00000347519 OR51G2Q8NGK0 314 aa16.71■□□□□ 0.27
CHMP4A-201ENST00000347519 OR52I1Q8NGK6 324 aa16.71■□□□□ 0.27
CHMP4A-201ENST00000347519 RND1Q92730 232 aa16.71■□□□□ 0.27
CHMP4A-201ENST00000347519 MARCH7Q9H992 704 aa16.71■□□□□ 0.27
CHMP4A-201ENST00000347519 SEC61A2Q9H9S3 476 aa16.71■□□□□ 0.27
CHMP4A-201ENST00000347519 EMC7Q9NPA0 242 aa16.71■□□□□ 0.27
CHMP4A-201ENST00000347519 MRPS18AQ9NVS2 196 aaKnown RBP16.71■□□□□ 0.27
CHMP4A-201ENST00000347519 HAO2Q9NYQ3 351 aa16.71■□□□□ 0.27
CHMP4A-201ENST00000347519 RPL36Q9Y3U8 105 aaKnown RBP16.71■□□□□ 0.27
CHMP4A-201ENST00000347519 ZNF462Q96JM2 2506 aa16.71■□□□□ 0.26
CHMP4A-201ENST00000347519 NCOA6Q14686 2063 aaPredicted RBP16.71■□□□□ 0.26
CHMP4A-201ENST00000347519 PCNX1Q96RV3 2341 aa16.7■□□□□ 0.26
CHMP4A-201ENST00000347519 ZNF587BE7ETH6 402 aa16.7■□□□□ 0.26
CHMP4A-201ENST00000347519 PTGES3LE9PB15 166 aa16.7■□□□□ 0.26
CHMP4A-201ENST00000347519 J3QKU1 62 aa16.7■□□□□ 0.26
CHMP4A-201ENST00000347519 LRRTM2O43300 516 aa16.7■□□□□ 0.26
CHMP4A-201ENST00000347519 IL18BPO95998 194 aa16.7■□□□□ 0.26
CHMP4A-201ENST00000347519 CD8BP10966 210 aa16.7■□□□□ 0.26
CHMP4A-201ENST00000347519 NR2C1P13056 603 aa16.7■□□□□ 0.26
CHMP4A-201ENST00000347519 BMP5P22003 454 aa16.7■□□□□ 0.26
CHMP4A-201ENST00000347519 IGHV1-2P23083 117 aa16.7■□□□□ 0.26
CHMP4A-201ENST00000347519 HSF2Q03933 536 aa16.7■□□□□ 0.26
CHMP4A-201ENST00000347519 LCN1P1Q5VSP4 162 aa16.7■□□□□ 0.26
CHMP4A-201ENST00000347519 ZNF474Q6S9Z5 364 aaPredicted RBP16.7■□□□□ 0.26
CHMP4A-201ENST00000347519 POLE4Q9NR33 117 aa16.7■□□□□ 0.26
CHMP4A-201ENST00000347519 TMEM38BQ9NVV0 291 aa16.7■□□□□ 0.26
CHMP4A-201ENST00000347519 ERVK-18Q9QC07 812 aa16.7■□□□□ 0.26
CHMP4A-201ENST00000347519 EXOGQ9Y2C4 368 aaKnown RBP16.7■□□□□ 0.26
CHMP4A-201ENST00000347519 MYRFQ9Y2G1 1151 aa16.7■□□□□ 0.26
CHMP4A-201ENST00000347519 COMMD3-BMI1R4GMX3 469 aa16.7■□□□□ 0.26
CHMP4A-201ENST00000347519 J3QRE1 110 aa16.69■□□□□ 0.26
CHMP4A-201ENST00000347519 HLA-DQA2P01906 255 aa16.69■□□□□ 0.26
CHMP4A-201ENST00000347519 SBK2P0C263 348 aa16.69■□□□□ 0.26
CHMP4A-201ENST00000347519 OPRM1P35372 400 aa16.69■□□□□ 0.26
CHMP4A-201ENST00000347519 ZNF84P51523 738 aa16.69■□□□□ 0.26
CHMP4A-201ENST00000347519 CDH15P55291 814 aa16.69■□□□□ 0.26
CHMP4A-201ENST00000347519 SLC35A2P78381 396 aa16.69■□□□□ 0.26
CHMP4A-201ENST00000347519 TMED1Q13445 227 aa16.69■□□□□ 0.26
CHMP4A-201ENST00000347519 TSC22D1Q15714 1073 aa16.69■□□□□ 0.26
CHMP4A-201ENST00000347519 SGCAQ16586 387 aa16.69■□□□□ 0.26
CHMP4A-201ENST00000347519 AHSA2Q719I0 299 aa16.69■□□□□ 0.26
CHMP4A-201ENST00000347519 ATCAYQ86WG3 371 aa16.69■□□□□ 0.26
CHMP4A-201ENST00000347519 ERI1Q8IV48 349 aaKnown RBP16.69■□□□□ 0.26
CHMP4A-201ENST00000347519 GABRG1Q8N1C3 465 aa16.69■□□□□ 0.26
CHMP4A-201ENST00000347519 ZNF540Q8NDQ6 660 aa16.69■□□□□ 0.26
CHMP4A-201ENST00000347519 CCDC120Q96HB5 630 aa16.69■□□□□ 0.26
CHMP4A-201ENST00000347519 NELFAQ9H3P2 528 aa16.69■□□□□ 0.26
CHMP4A-201ENST00000347519 DUSP21Q9H596 190 aa16.69■□□□□ 0.26
CHMP4A-201ENST00000347519 ZNF629Q9UEG4 869 aaPredicted RBP16.69■□□□□ 0.26
CHMP4A-201ENST00000347519 SNTNA6NMZ2 147 aa16.68■□□□□ 0.26
CHMP4A-201ENST00000347519 HTR1AP08908 422 aa16.68■□□□□ 0.26
CHMP4A-201ENST00000347519 B4GALT1P15291 398 aa16.68■□□□□ 0.26
CHMP4A-201ENST00000347519 MPGP29372 298 aa16.68■□□□□ 0.26
CHMP4A-201ENST00000347519 GLO1Q04760 184 aa16.68■□□□□ 0.26
CHMP4A-201ENST00000347519 KCNMB1Q16558 191 aa16.68■□□□□ 0.26
CHMP4A-201ENST00000347519 KLHL24Q6TFL4 600 aa16.68■□□□□ 0.26
CHMP4A-201ENST00000347519 Q6ZT83 130 aa16.68■□□□□ 0.26
CHMP4A-201ENST00000347519 LUZP2Q86TE4 346 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms