RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 TPTEP56180 551 aa8.28□□□□□ -1.08
ATG4A-202ENST00000345734 RPL27P61353 136 aaKnown RBP8.28□□□□□ -1.08
ATG4A-202ENST00000345734 CD300CQ08708 224 aa8.28□□□□□ -1.08
ATG4A-202ENST00000345734 GPR50Q13585 617 aa8.28□□□□□ -1.08
ATG4A-202ENST00000345734 MELKQ14680 651 aa8.28□□□□□ -1.08
ATG4A-202ENST00000345734 GLYR1Q49A26 553 aaPredicted RBP8.28□□□□□ -1.08
ATG4A-202ENST00000345734 OTPQ5XKR4 325 aa8.28□□□□□ -1.08
ATG4A-202ENST00000345734 PLEKHG7Q6ZR37 379 aa8.28□□□□□ -1.08
ATG4A-202ENST00000345734 FAM214BQ7L5A3 538 aa8.28□□□□□ -1.08
ATG4A-202ENST00000345734 GLRX5Q86SX6 157 aa8.28□□□□□ -1.08
ATG4A-202ENST00000345734 AKAP14Q86UN6 197 aa8.28□□□□□ -1.08
ATG4A-202ENST00000345734 RPS19BP1Q86WX3 136 aaKnown RBP8.28□□□□□ -1.08
ATG4A-202ENST00000345734 GPALPP1Q8IXQ4 340 aa8.28□□□□□ -1.08
ATG4A-202ENST00000345734 FADS6Q8N9I5 356 aa8.28□□□□□ -1.08
ATG4A-202ENST00000345734 ZNF519Q8TB69 540 aa8.28□□□□□ -1.08
ATG4A-202ENST00000345734 PELI1Q96FA3 418 aa8.28□□□□□ -1.08
ATG4A-202ENST00000345734 FOXN4Q96NZ1 517 aa8.28□□□□□ -1.08
ATG4A-202ENST00000345734 SMAD5Q99717 465 aaKnown RBP8.28□□□□□ -1.08
ATG4A-202ENST00000345734 ZPBPQ9BS86 351 aa8.28□□□□□ -1.08
ATG4A-202ENST00000345734 PPIL3Q9H2H8 161 aaKnown RBP8.28□□□□□ -1.08
ATG4A-202ENST00000345734 TMEM185BQ9H7F4 350 aa8.28□□□□□ -1.08
ATG4A-202ENST00000345734 MRPL39Q9NYK5 338 aaKnown RBP8.28□□□□□ -1.08
ATG4A-202ENST00000345734 PLEKHB1Q9UF11 243 aaPredicted RBP8.28□□□□□ -1.08
ATG4A-202ENST00000345734 ST6GALNAC2Q9UJ37 374 aa8.28□□□□□ -1.08
ATG4A-202ENST00000345734 FARSAQ9Y285 508 aaKnown RBP8.28□□□□□ -1.08
ATG4A-202ENST00000345734 GSTK1Q9Y2Q3 226 aa8.28□□□□□ -1.08
ATG4A-202ENST00000345734 KLHDC2Q9Y2U9 406 aa8.28□□□□□ -1.08
ATG4A-202ENST00000345734 PEX16Q9Y5Y5 336 aa8.28□□□□□ -1.08
ATG4A-202ENST00000345734 ASPMQ8IZT6 3477 aa8.28□□□□□ -1.08
ATG4A-202ENST00000345734 A0A1W2PQ72 361 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 MS4A18H0YCH9 400 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 TAF4O00268 1085 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 PLPP2O43688 288 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 RENP00797 406 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 IGHEP01854 428 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 F8A1P23610 371 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 PSMB10P40306 273 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 RPS27P42677 84 aaKnown RBP8.27□□□□□ -1.08
ATG4A-202ENST00000345734 SSR4P51571 173 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 MLF1P58340 268 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 MS4A18Q3C1V0 323 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 SLC25A53Q5H9E4 307 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 CLVS2Q5SYC1 327 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 EEF1A1P5Q5VTE0 462 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 DMKNQ6E0U4 476 aaPredicted RBP8.27□□□□□ -1.08
ATG4A-202ENST00000345734 OPN5Q6U736 354 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 C5orf46Q6UWT4 87 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 WDFY1Q8IWB7 410 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 TIGD4Q8IY51 512 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 OR4K17Q8NGC6 315 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 OR13C5Q8NGS8 318 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 MFSD8Q8NHS3 518 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 NEIL3Q8TAT5 605 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 SNX33Q8WV41 574 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 THAP4Q8WY91 577 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 DDIT4LQ96D03 193 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 MRGPRX4Q96LA9 322 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 PGLYRP3Q96LB9 341 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 MED18Q9BUE0 208 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 TXNIPQ9H3M7 391 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 C7orf69Q9H7B7 122 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 PROK2Q9HC23 129 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 CPNE5Q9HCH3 593 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 ACOXLQ9NUZ1 547 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 GNG8Q9UK08 70 aa8.27□□□□□ -1.08
ATG4A-202ENST00000345734 MED13Q9UHV7 2174 aa8.27□□□□□ -1.09
ATG4A-202ENST00000345734 NCKAP5O14513 1909 aa8.27□□□□□ -1.09
ATG4A-202ENST00000345734 CNOT1A5YKK6 2376 aaKnown RBP8.27□□□□□ -1.09
ATG4A-202ENST00000345734 PRSS37A4D1T9 235 aa8.27□□□□□ -1.09
ATG4A-202ENST00000345734 TRIM77I1YAP6 450 aa8.27□□□□□ -1.09
ATG4A-202ENST00000345734 XKRYO14609 159 aa8.27□□□□□ -1.09
ATG4A-202ENST00000345734 CASKO14936 926 aa8.27□□□□□ -1.09
ATG4A-202ENST00000345734 ZNF208O43345 1280 aa8.27□□□□□ -1.09
ATG4A-202ENST00000345734 AKR7A3O95154 331 aa8.27□□□□□ -1.09
ATG4A-202ENST00000345734 RAB40ALP0C0E4 278 aa8.27□□□□□ -1.09
ATG4A-202ENST00000345734 PSKH1P11801 424 aa8.27□□□□□ -1.09
ATG4A-202ENST00000345734 CD40LGP29965 261 aa8.27□□□□□ -1.09
ATG4A-202ENST00000345734 PPP5CP53041 499 aa8.27□□□□□ -1.09
ATG4A-202ENST00000345734 ACTA2P62736 377 aa8.27□□□□□ -1.09
ATG4A-202ENST00000345734 ACTG2P63267 376 aa8.27□□□□□ -1.09
ATG4A-202ENST00000345734 MRPL28Q13084 256 aaKnown RBP8.27□□□□□ -1.09
ATG4A-202ENST00000345734 FAM27D1Q5T7N8 215 aa8.27□□□□□ -1.09
ATG4A-202ENST00000345734 HES3Q5TGS1 186 aa8.27□□□□□ -1.09
ATG4A-202ENST00000345734 B3GNTL1Q67FW5 361 aaPredicted RBP8.27□□□□□ -1.09
ATG4A-202ENST00000345734 SLC16A9Q7RTY1 509 aa8.27□□□□□ -1.09
ATG4A-202ENST00000345734 FAM109AQ8N4B1 249 aa8.27□□□□□ -1.09
ATG4A-202ENST00000345734 PARP16Q8N5Y8 322 aa8.27□□□□□ -1.09
ATG4A-202ENST00000345734 TMEM156Q8N614 296 aa8.27□□□□□ -1.09
ATG4A-202ENST00000345734 OR2T4Q8NH00 348 aa8.27□□□□□ -1.09
ATG4A-202ENST00000345734 LHFPL5Q8TAF8 219 aa8.27□□□□□ -1.09
ATG4A-202ENST00000345734 INTS12Q96CB8 462 aaKnown RBP8.27□□□□□ -1.09
ATG4A-202ENST00000345734 WDR76Q9H967 626 aa8.27□□□□□ -1.09
ATG4A-202ENST00000345734 SH2D2AQ9NP31 389 aa8.27□□□□□ -1.09
ATG4A-202ENST00000345734 PARD6AQ9NPB6 346 aa8.27□□□□□ -1.09
ATG4A-202ENST00000345734 ANKRD10Q9NXR5 420 aa8.27□□□□□ -1.09
ATG4A-202ENST00000345734 EMC3Q9P0I2 261 aa8.27□□□□□ -1.09
ATG4A-202ENST00000345734 MOKQ9UQ07 419 aa8.27□□□□□ -1.09
ATG4A-202ENST00000345734 POLHQ9Y253 713 aa8.27□□□□□ -1.09
ATG4A-202ENST00000345734 CCDC187A0A096LP49 1063 aa8.26□□□□□ -1.09
ATG4A-202ENST00000345734 A0A1W2PRG6 482 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms