RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 HMGN4O00479 90 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 DPP4P27487 766 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 ECI1P42126 302 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 SELENOPP49908 381 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 TMEM65Q6PI78 240 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 CALHM3Q86XJ0 350 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 ORAI1Q96D31 301 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 TVP23CQ96ET8 276 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 CMC2Q9NRP2 79 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 C19orf25Q9UFG5 118 aaPredicted RBP11.12□□□□□ -0.63
COL12A1-202ENST00000345356 CBLCQ9ULV8 474 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 C17orf112F2Z3M2 114 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 KLK8O60259 260 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 CTNSO60931 367 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 NDUFB6O95139 128 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 ZNF750Q32MQ0 723 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 ZNF385BQ569K4 471 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 SPRYD7Q5W111 196 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 GGNBP1Q5YKI7 109 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 OR2G2Q8NGZ5 317 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 IGSF21Q96ID5 467 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 P2RY12Q9H244 342 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 CHRNA9Q9UGM1 479 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 GATCO43716 136 aaKnown RBP11.12□□□□□ -0.63
COL12A1-202ENST00000345356 SUSD5O60279 629 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 CXCL3P19876 107 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 KITLGP21583 273 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 FBLP22087 321 aaKnown RBP11.12□□□□□ -0.63
COL12A1-202ENST00000345356 MSX1P28360 303 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 ELLP55199 621 aaPredicted RBP11.12□□□□□ -0.63
COL12A1-202ENST00000345356 MLF1P58340 268 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 CDK5R1Q15078 307 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 AARDQ4LEZ3 155 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 ZNF628Q5EBL2 1059 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 OR2A2Q6IF42 318 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 SPICQ8N5J4 248 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 SGPP1Q9BX95 441 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 MS4A8Q9BY19 250 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 ZNF586Q9NXT0 402 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 VDAC3Q9Y277 283 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 HOXC13P31276 330 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 MSMO1Q15800 293 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 RNLSQ5VYX0 342 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 POM121Q96HA1 1249 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 DNAJC5Q9H3Z4 198 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 LDAHQ9H6V9 325 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 LAMP3Q9UQV4 416 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 NTNG1Q9Y2I2 539 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 MAN2B1O00754 1011 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 INHBBP09529 407 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 PI3P19957 117 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 SLC6A1P30531 599 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 RANP62826 216 aaKnown RBP11.12□□□□□ -0.63
COL12A1-202ENST00000345356 POU3F1Q03052 451 aaPredicted RBP11.12□□□□□ -0.63
COL12A1-202ENST00000345356 GPNMBQ14956 572 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 IQCJQ1A5X6 159 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 GLIPR1L1Q6UWM5 242 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 RFLNAQ6ZTI6 216 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 ANGPTL5Q86XS5 388 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 OR8U1Q8NH10 309 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 LMX1AQ8TE12 382 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 POLMQ9NP87 494 aaPredicted RBP11.12□□□□□ -0.63
COL12A1-202ENST00000345356 PARD6AQ9NPB6 346 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 SLC6A13Q9NSD5 602 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 TAS2R4Q9NYW5 299 aa11.12□□□□□ -0.63
COL12A1-202ENST00000345356 C17orf105B2RV13 164 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 SPP1P10451 314 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 RPL29P47914 159 aaKnown RBP11.11□□□□□ -0.63
COL12A1-202ENST00000345356 CPXM2Q8N436 756 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 SIGLECL1Q8N7X8 197 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 OR52E1Q8NGJ3 308 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 OR14A16Q8NHC5 309 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 BSCL2Q96G97 398 aaPredicted RBP11.11□□□□□ -0.63
COL12A1-202ENST00000345356 MEGF10Q96KG7 1140 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 TSSK2Q96PF2 358 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 ADOQ96SZ5 270 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 PLEKHB1Q9UF11 243 aaPredicted RBP11.11□□□□□ -0.63
COL12A1-202ENST00000345356 NXT1Q9UKK6 140 aaKnown RBP11.11□□□□□ -0.63
COL12A1-202ENST00000345356 FBXO4Q9UKT5 387 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 V9GYS6 101 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 SIGLEC1Q9BZZ2 1709 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 METTL15P1P0C7V9 234 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 HOXB2P14652 356 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 ITGB8P26012 769 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 RFC3P40938 356 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 INSL4Q14641 139 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 NSDHLQ15738 373 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 GUK1Q16774 197 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 LGALSLQ3ZCW2 172 aaPredicted RBP11.11□□□□□ -0.63
COL12A1-202ENST00000345356 AADACL3Q5VUY0 350 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 LCN15Q6UWW0 184 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 OR13D1Q8NGV5 346 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 TSACCQ96A04 125 aaPredicted RBP11.11□□□□□ -0.63
COL12A1-202ENST00000345356 INTS12Q96CB8 462 aaKnown RBP11.11□□□□□ -0.63
COL12A1-202ENST00000345356 SPATA6Q9NWH7 488 aaPredicted RBP11.11□□□□□ -0.63
COL12A1-202ENST00000345356 C9J4A7 227 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 RNGTTO60942 597 aaKnown RBP11.11□□□□□ -0.63
COL12A1-202ENST00000345356 OR7C1O76099 320 aaPredicted RBP11.11□□□□□ -0.63
COL12A1-202ENST00000345356 CLDN1O95832 211 aa11.11□□□□□ -0.63
COL12A1-202ENST00000345356 HOXC8P31273 242 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms