RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 MAP2K6P52564 334 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 RPS7P62081 194 aaKnown RBP11.56□□□□□ -0.56
CLK3-201ENST00000345005 RPS18P62269 152 aaKnown RBP11.56□□□□□ -0.56
CLK3-201ENST00000345005 ERVK-25P63136 954 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 LGALS3BPQ08380 585 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 SLC36A2Q495M3 483 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 ALG10Q5BKT4 473 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 STPG1Q5TH74 334 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 C1orf140Q5VVS0 124 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 VASNQ6EMK4 673 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 SHFQ7M4L6 423 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 CEACAM19Q7Z692 300 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 ARMC10Q8N2F6 343 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 LRRC75AQ8NAA5 344 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 CYB561A3Q8NBI2 242 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 OR51G2Q8NGK0 314 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 OR6S1Q8NH40 331 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 OR4K13Q8NH42 304 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 LILRB1Q8NHL6 650 aaPredicted RBP11.56□□□□□ -0.56
CLK3-201ENST00000345005 MOSPD2Q8NHP6 518 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 ABHD4Q8TB40 342 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 TRMT10AQ8TBZ6 339 aaKnown RBP11.56□□□□□ -0.56
CLK3-201ENST00000345005 HCAR1Q9BXC0 346 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 OR51V1Q9H2C8 321 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 ZCCHC4Q9H5U6 513 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 CDCP1Q9H5V8 836 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 FOXJ2Q9P0K8 574 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 ADAM18Q9Y3Q7 739 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 NPTNQ9Y639 398 aa11.56□□□□□ -0.56
CLK3-201ENST00000345005 GATBO75879 557 aaKnown RBP11.55□□□□□ -0.56
CLK3-201ENST00000345005 AHSA1O95433 338 aa11.55□□□□□ -0.56
CLK3-201ENST00000345005 WDPCPO95876 746 aa11.55□□□□□ -0.56
CLK3-201ENST00000345005 TGM6O95932 706 aa11.55□□□□□ -0.56
CLK3-201ENST00000345005 EIF4EP06730 217 aaKnown RBP11.55□□□□□ -0.56
CLK3-201ENST00000345005 RAB3BP20337 219 aa11.55□□□□□ -0.56
CLK3-201ENST00000345005 CD79BP40259 229 aa11.55□□□□□ -0.56
CLK3-201ENST00000345005 NBL1P41271 181 aa11.55□□□□□ -0.56
CLK3-201ENST00000345005 ZNF41P51814 821 aaPredicted RBP11.55□□□□□ -0.56
CLK3-201ENST00000345005 MLF1P58340 268 aa11.55□□□□□ -0.56
CLK3-201ENST00000345005 CTXN1P60606 82 aa11.55□□□□□ -0.56
CLK3-201ENST00000345005 RPL18Q07020 188 aaKnown RBP11.55□□□□□ -0.56
CLK3-201ENST00000345005 MFSD13AQ14CX5 517 aa11.55□□□□□ -0.56
CLK3-201ENST00000345005 GXYLT1Q4G148 440 aa11.55□□□□□ -0.56
CLK3-201ENST00000345005 EMC4Q5J8M3 183 aa11.55□□□□□ -0.56
CLK3-201ENST00000345005 IL20RBQ6UXL0 311 aa11.55□□□□□ -0.56
CLK3-201ENST00000345005 OR11H7Q8NGC8 314 aa11.55□□□□□ -0.56
CLK3-201ENST00000345005 PPA2Q9H2U2 334 aa11.55□□□□□ -0.56
CLK3-201ENST00000345005 CHCHD2Q9Y6H1 151 aaPredicted RBP11.55□□□□□ -0.56
CLK3-201ENST00000345005 ZC3H12DA2A288 527 aaKnown RBP11.54□□□□□ -0.56
CLK3-201ENST00000345005 PROB1E7EW31 1015 aa11.54□□□□□ -0.56
CLK3-201ENST00000345005 SMLR1H3BR10 107 aa11.54□□□□□ -0.56
CLK3-201ENST00000345005 ETV2O00321 342 aaPredicted RBP11.54□□□□□ -0.56
CLK3-201ENST00000345005 GPR171O14626 319 aa11.54□□□□□ -0.56
CLK3-201ENST00000345005 TXNDC12O95881 172 aa11.54□□□□□ -0.56
CLK3-201ENST00000345005 RRASP10301 218 aa11.54□□□□□ -0.56
CLK3-201ENST00000345005 SHC1P29353 583 aa11.54□□□□□ -0.56
CLK3-201ENST00000345005 BTCP35070 178 aa11.54□□□□□ -0.56
CLK3-201ENST00000345005 SLC16A1P53985 500 aa11.54□□□□□ -0.56
CLK3-201ENST00000345005 S100A12P80511 92 aa11.54□□□□□ -0.56
CLK3-201ENST00000345005 MRPS10P82664 201 aaKnown RBP11.54□□□□□ -0.56
CLK3-201ENST00000345005 CHAF1BQ13112 559 aa11.54□□□□□ -0.56
CLK3-201ENST00000345005 SNTB2Q13425 540 aaKnown RBP11.54□□□□□ -0.56
CLK3-201ENST00000345005 CAMK2DQ13557 499 aa11.54□□□□□ -0.56
CLK3-201ENST00000345005 GSG1Q2KHT4 349 aa11.54□□□□□ -0.56
CLK3-201ENST00000345005 SLC25A53Q5H9E4 307 aa11.54□□□□□ -0.56
CLK3-201ENST00000345005 TMEM156Q8N614 296 aa11.54□□□□□ -0.56
CLK3-201ENST00000345005 SIRT6Q8N6T7 355 aa11.54□□□□□ -0.56
CLK3-201ENST00000345005 UXS1Q8NBZ7 420 aa11.54□□□□□ -0.56
CLK3-201ENST00000345005 NPEPL1Q8NDH3 523 aa11.54□□□□□ -0.56
CLK3-201ENST00000345005 SDR9C7Q8NEX9 313 aa11.54□□□□□ -0.56
CLK3-201ENST00000345005 KISS1RQ969F8 398 aaPredicted RBP11.54□□□□□ -0.56
CLK3-201ENST00000345005 MRGPRX4Q96LA9 322 aa11.54□□□□□ -0.56
CLK3-201ENST00000345005 PTDSS2Q9BVG9 487 aa11.54□□□□□ -0.56
CLK3-201ENST00000345005 GSX2Q9BZM3 304 aa11.54□□□□□ -0.56
CLK3-201ENST00000345005 HEXA-AS1Q9H8Q6 139 aa11.54□□□□□ -0.56
CLK3-201ENST00000345005 KLHL1Q9NR64 748 aa11.54□□□□□ -0.56
CLK3-201ENST00000345005 MED9Q9NWA0 146 aa11.54□□□□□ -0.56
CLK3-201ENST00000345005 FBXL4Q9UKA2 621 aa11.54□□□□□ -0.56
CLK3-201ENST00000345005 SESN1Q9Y6P5 492 aa11.54□□□□□ -0.56
CLK3-201ENST00000345005 TRAV6A0A075B6T7 132 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 I3L521 148 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 ZNF208O43345 1280 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 SULT1B1O43704 296 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 SSNA1O43805 119 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 SC5DO75845 299 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 TNFSF15O95150 251 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 SDHAP31040 664 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 DLSTP36957 453 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 SGCBQ16585 318 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 SLC35D3Q5M8T2 416 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 ELFN2Q5R3F8 820 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 METTL11BQ5VVY1 283 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 C1QL3Q5VWW1 255 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 LYPD4Q6UWN0 246 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 ARSKQ6UWY0 536 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 ASCL5Q7RTU5 278 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 FAM122BQ7Z309 247 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 COMMD7Q86VX2 200 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 JAZF1Q86VZ6 243 aa11.53□□□□□ -0.56
CLK3-201ENST00000345005 PM20D2Q8IYS1 436 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms