RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 RNLSQ5VYX0 342 aa9.97□□□□□ -0.81
RPL28-201ENST00000344063 OR10K2Q6IF99 312 aa9.97□□□□□ -0.81
RPL28-201ENST00000344063 BPIFCQ8NFQ6 507 aa9.97□□□□□ -0.81
RPL28-201ENST00000344063 SMIM4Q8WVI0 70 aa9.97□□□□□ -0.81
RPL28-201ENST00000344063 TOE1Q96GM8 510 aaKnown RBP9.97□□□□□ -0.81
RPL28-201ENST00000344063 SLC46A1Q96NT5 459 aa9.97□□□□□ -0.81
RPL28-201ENST00000344063 WDR77Q9BQA1 342 aaPredicted RBP9.97□□□□□ -0.81
RPL28-201ENST00000344063 ZFP57Q9NU63 452 aa9.97□□□□□ -0.81
RPL28-201ENST00000344063 GFOD1Q9NXC2 390 aa9.97□□□□□ -0.81
RPL28-201ENST00000344063 SLC7A11Q9UPY5 501 aa9.97□□□□□ -0.81
RPL28-201ENST00000344063 SPTBP11277 2137 aa9.97□□□□□ -0.81
RPL28-201ENST00000344063 TRAV36DV7A0A075B6V5 113 aa9.97□□□□□ -0.81
RPL28-201ENST00000344063 LINC00862A6NCI5 91 aa9.97□□□□□ -0.81
RPL28-201ENST00000344063 CRTAPO75718 401 aaPredicted RBP9.97□□□□□ -0.81
RPL28-201ENST00000344063 SLC34A2O95436 690 aa9.97□□□□□ -0.81
RPL28-201ENST00000344063 HIST1H1CP16403 213 aaKnown RBP9.97□□□□□ -0.81
RPL28-201ENST00000344063 ITGB8P26012 769 aa9.97□□□□□ -0.81
RPL28-201ENST00000344063 CSF2RBP32927 897 aa9.97□□□□□ -0.81
RPL28-201ENST00000344063 SLC26A5P58743 744 aa9.97□□□□□ -0.81
RPL28-201ENST00000344063 MAT1AQ00266 395 aaKnown RBP9.97□□□□□ -0.81
RPL28-201ENST00000344063 ACY1Q03154 408 aa9.97□□□□□ -0.81
RPL28-201ENST00000344063 LIPNQ5VXI9 398 aa9.97□□□□□ -0.81
RPL28-201ENST00000344063 MED25Q71SY5 747 aa9.97□□□□□ -0.81
RPL28-201ENST00000344063 SUMF2Q8NBJ7 301 aa9.97□□□□□ -0.81
RPL28-201ENST00000344063 SLC25A21Q9BQT8 299 aaPredicted RBP9.97□□□□□ -0.81
RPL28-201ENST00000344063 SLC22A11Q9NSA0 550 aa9.97□□□□□ -0.81
RPL28-201ENST00000344063 TSTD3H0UI37 97 aa9.96□□□□□ -0.81
RPL28-201ENST00000344063 TRIM77I1YAP6 450 aa9.96□□□□□ -0.81
RPL28-201ENST00000344063 TMEM127O75204 238 aa9.96□□□□□ -0.81
RPL28-201ENST00000344063 ZNF16P17020 682 aaPredicted RBP9.96□□□□□ -0.81
RPL28-201ENST00000344063 IDH3GP51553 393 aaPredicted RBP9.96□□□□□ -0.81
RPL28-201ENST00000344063 SNU13P55769 128 aaKnown RBP9.96□□□□□ -0.81
RPL28-201ENST00000344063 SNRPEP62304 92 aaKnown RBP9.96□□□□□ -0.81
RPL28-201ENST00000344063 SLC22A6Q4U2R8 563 aa9.96□□□□□ -0.81
RPL28-201ENST00000344063 FBLIM1Q8WUP2 373 aa9.96□□□□□ -0.81
RPL28-201ENST00000344063 TPSD1Q9BZJ3 242 aa9.96□□□□□ -0.81
RPL28-201ENST00000344063 CKAP5Q14008 2032 aa9.96□□□□□ -0.81
RPL28-201ENST00000344063 HCRTR1O43613 425 aa9.96□□□□□ -0.82
RPL28-201ENST00000344063 CFDP00746 253 aaPredicted RBP9.96□□□□□ -0.82
RPL28-201ENST00000344063 AGERQ15109 404 aa9.96□□□□□ -0.82
RPL28-201ENST00000344063 KCNRGQ8N5I3 272 aa9.96□□□□□ -0.82
RPL28-201ENST00000344063 FRMD1Q8N878 549 aa9.96□□□□□ -0.82
RPL28-201ENST00000344063 FAM3DQ96BQ1 224 aa9.96□□□□□ -0.82
RPL28-201ENST00000344063 LCORQ96JN0 433 aaPredicted RBP9.96□□□□□ -0.82
RPL28-201ENST00000344063 NXF2Q9GZY0 626 aaKnown RBP9.96□□□□□ -0.82
RPL28-201ENST00000344063 RARRES3Q9UL19 164 aa9.96□□□□□ -0.82
RPL28-201ENST00000344063 SRPK3Q9UPE1 567 aa9.96□□□□□ -0.82
RPL28-201ENST00000344063 TRAV1-2A0A0B4J238 106 aa9.96□□□□□ -0.82
RPL28-201ENST00000344063 H3BML4 177 aa9.96□□□□□ -0.82
RPL28-201ENST00000344063 GPR31O00270 319 aa9.96□□□□□ -0.82
RPL28-201ENST00000344063 SHOXO15266 292 aa9.96□□□□□ -0.82
RPL28-201ENST00000344063 HSPA12AO43301 675 aa9.96□□□□□ -0.82
RPL28-201ENST00000344063 CEACAM5P06731 702 aa9.96□□□□□ -0.82
RPL28-201ENST00000344063 SPI1P17947 270 aa9.96□□□□□ -0.82
RPL28-201ENST00000344063 CLINT1Q14677 625 aa9.96□□□□□ -0.82
RPL28-201ENST00000344063 GLYATL3Q5SZD4 288 aa9.96□□□□□ -0.82
RPL28-201ENST00000344063 FAM69BQ5VUD6 431 aa9.96□□□□□ -0.82
RPL28-201ENST00000344063 FCRL6Q6DN72 434 aa9.96□□□□□ -0.82
RPL28-201ENST00000344063 ZNF793Q6ZN11 406 aa9.96□□□□□ -0.82
RPL28-201ENST00000344063 OR4D9Q8NGE8 314 aa9.96□□□□□ -0.82
RPL28-201ENST00000344063 TSSK2Q96PF2 358 aa9.96□□□□□ -0.82
RPL28-201ENST00000344063 OR1F2PQ96R84 312 aa9.96□□□□□ -0.82
RPL28-201ENST00000344063 SELENOIQ9C0D9 397 aa9.96□□□□□ -0.82
RPL28-201ENST00000344063 SLC6A17Q9H1V8 727 aa9.96□□□□□ -0.82
RPL28-201ENST00000344063 SIRT3Q9NTG7 399 aaPredicted RBP9.96□□□□□ -0.82
RPL28-201ENST00000344063 MBD1Q9UIS9 605 aaPredicted RBP9.96□□□□□ -0.82
RPL28-201ENST00000344063 PURGQ9UJV8 347 aaKnown RBP9.96□□□□□ -0.82
RPL28-201ENST00000344063 FBXO4Q9UKT5 387 aa9.96□□□□□ -0.82
RPL28-201ENST00000344063 KCNE3Q9Y6H6 103 aa9.96□□□□□ -0.82
RPL28-201ENST00000344063 RNF215Q9Y6U7 377 aa9.96□□□□□ -0.82
RPL28-201ENST00000344063 IFITM5A6NNB3 132 aa9.95□□□□□ -0.82
RPL28-201ENST00000344063 H7C1Q1 480 aa9.95□□□□□ -0.82
RPL28-201ENST00000344063 UTS2O95399 124 aa9.95□□□□□ -0.82
RPL28-201ENST00000344063 RAB5CP51148 216 aa9.95□□□□□ -0.82
RPL28-201ENST00000344063 HSD17B7P56937 341 aa9.95□□□□□ -0.82
RPL28-201ENST00000344063 MEP1BQ16820 701 aa9.95□□□□□ -0.82
RPL28-201ENST00000344063 TMEM215Q68D42 235 aa9.95□□□□□ -0.82
RPL28-201ENST00000344063 C17orf47Q8NEP4 570 aa9.95□□□□□ -0.82
RPL28-201ENST00000344063 OR4C16Q8NGL9 310 aa9.95□□□□□ -0.82
RPL28-201ENST00000344063 SLC41A2Q96JW4 573 aa9.95□□□□□ -0.82
RPL28-201ENST00000344063 CMSS1Q9BQ75 279 aaKnown RBP9.95□□□□□ -0.82
RPL28-201ENST00000344063 CUTCQ9NTM9 273 aa9.95□□□□□ -0.82
RPL28-201ENST00000344063 RP1P56715 2156 aa9.95□□□□□ -0.82
RPL28-201ENST00000344063 LOC105371267A0A1B0GV96 52 aa9.95□□□□□ -0.82
RPL28-201ENST00000344063 GALR3O60755 368 aaPredicted RBP9.95□□□□□ -0.82
RPL28-201ENST00000344063 PMS2P2O95744 297 aa9.95□□□□□ -0.82
RPL28-201ENST00000344063 OR13C7P0DN81 318 aa9.95□□□□□ -0.82
RPL28-201ENST00000344063 POLR2HP52434 150 aaKnown RBP9.95□□□□□ -0.82
RPL28-201ENST00000344063 METAP1P53582 386 aa9.95□□□□□ -0.82
RPL28-201ENST00000344063 KIAA0141Q14154 515 aaPredicted RBP9.95□□□□□ -0.82
RPL28-201ENST00000344063 PGAP1Q75T13 922 aa9.95□□□□□ -0.82
RPL28-201ENST00000344063 CBLN2Q8IUK8 224 aa9.95□□□□□ -0.82
RPL28-201ENST00000344063 OR14A16Q8NHC5 309 aa9.95□□□□□ -0.82
RPL28-201ENST00000344063 FNDC9Q8TBE3 224 aa9.95□□□□□ -0.82
RPL28-201ENST00000344063 FAM174AQ8TBP5 190 aa9.95□□□□□ -0.82
RPL28-201ENST00000344063 ZG16BQ96DA0 208 aa9.95□□□□□ -0.82
RPL28-201ENST00000344063 SDHCQ99643 169 aaPredicted RBP9.95□□□□□ -0.82
RPL28-201ENST00000344063 SLC19A3Q9BZV2 496 aa9.95□□□□□ -0.82
RPL28-201ENST00000344063 TAS2R5Q9NYW4 299 aa9.95□□□□□ -0.82
RPL28-201ENST00000344063 VDAC3Q9Y277 283 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms