RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 SPEM1Q8N4L4 309 aa13.39□□□□□ -0.27
VIPAS39-202ENST00000343765 APCDD1LQ8NCL9 501 aa13.39□□□□□ -0.27
VIPAS39-202ENST00000343765 OR8H1Q8NGG4 311 aa13.39□□□□□ -0.27
VIPAS39-202ENST00000343765 ABHD6Q9BV23 337 aa13.39□□□□□ -0.27
VIPAS39-202ENST00000343765 CHIAQ9BZP6 476 aa13.39□□□□□ -0.27
VIPAS39-202ENST00000343765 CHRDQ9H2X0 955 aa13.39□□□□□ -0.27
VIPAS39-202ENST00000343765 OPN1LWP04000 364 aa13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 ITGA5P08648 1049 aa13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 FAM69BQ5VUD6 431 aa13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 GUSBP11Q6P575 273 aa13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 ANKRD37Q7Z713 158 aa13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 DNASE2BQ8WZ79 361 aa13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 C8orf44Q96CB5 159 aa13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 CITED4Q96RK1 184 aa13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 VSX1Q9NZR4 365 aaPredicted RBP13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 FBXL3Q9UKT7 428 aa13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 CDV3Q9UKY7 258 aaKnown RBP13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 HRH3Q9Y5N1 445 aa13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 ETV7Q9Y603 341 aa13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 TRBV11-1A0A0K0K1C0 115 aa13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 ACOT7O00154 380 aa13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 ADAM10O14672 748 aa13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 KDM4BO94953 1096 aa13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 RAF1P04049 648 aa13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 IFNGR1P15260 489 aa13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 ANXA7P20073 488 aaKnown RBP13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 RAD52P43351 418 aa13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 POU3F4P49335 361 aa13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 SELENOPP49908 381 aa13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 ZP1P60852 638 aa13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 GUCA2AQ02747 115 aa13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 SHBQ15464 509 aa13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 LINC00303Q3SY05 128 aa13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 NKAIN1Q4KMZ8 207 aa13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 PTCRAQ6ISU1 281 aaPredicted RBP13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 PLPP5Q8NEB5 264 aa13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 MCHR2Q969V1 340 aa13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 ACTR6Q9GZN1 396 aa13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 MED29Q9NX70 200 aa13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 LRP12Q9Y561 859 aa13.38□□□□□ -0.27
VIPAS39-202ENST00000343765 ANKRD20A5PA0PJZ0 165 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 ALDOBP05062 364 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 SULT1A3P0DMM9 295 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 SULT1A4P0DMN0 295 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 SSTR2P30874 369 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 ARRB1P49407 418 aaPredicted RBP13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 SLC26A5P58743 744 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 STARD6P59095 220 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 PUDPQ08623 228 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 WDR45BQ5MNZ6 344 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 RHBDD2Q6NTF9 364 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 CREB3L2Q70SY1 520 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 ZNF248Q8NDW4 579 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 RNF128Q8TEB7 428 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 ASB17Q8WXJ9 295 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 CDCP1Q9H5V8 836 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 RANBP3Q9H6Z4 567 aaPredicted RBP13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 METTL17Q9H7H0 456 aaPredicted RBP13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 NOX3Q9HBY0 568 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 SEMA5BQ9P283 1151 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 DHDHQ9UQ10 334 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 NPIPA5E9PKD4 350 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 EIF1AYO14602 144 aaKnown RBP13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 GLSO94925 669 aaPredicted RBP13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 RIDAP52758 137 aaKnown RBP13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 POU3F1Q03052 451 aaPredicted RBP13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 GLO1Q04760 184 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 PCGF3Q3KNV8 242 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 ASPHD2Q6ICH7 369 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 CORO6Q6QEF8 472 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 FGD2Q7Z6J4 655 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 KMT5CQ86Y97 462 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 C5orf34Q96MH7 638 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 MRI1Q9BV20 369 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 MYEF2Q9P2K5 600 aaKnown RBP13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 NPIPA1Q9UND3 350 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 SRPK3Q9UPE1 567 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 EMC9Q9Y3B6 208 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 SULT1B1O43704 296 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 OR2T1O43869 369 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 ALX3O95076 343 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 FOXF1Q12946 379 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 PAPD4Q6PIY7 484 aaKnown RBP13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 STK35Q8TDR2 534 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 TMEM234Q8WY98 164 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 SHDQ96IW2 340 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 TRAF4Q9BUZ4 470 aaPredicted RBP13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 TMEM185BQ9H7F4 350 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 MRPL39Q9NYK5 338 aaKnown RBP13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 TAS2R4Q9NYW5 299 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 KLRF1Q9NZS2 232 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 ZNF69Q9UC07 566 aa13.37□□□□□ -0.27
VIPAS39-202ENST00000343765 COL5A1P20908 1838 aaPredicted RBP13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 ZDBF2Q9HCK1 2354 aa13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 TRAV18A0A075B6X5 111 aa13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 MEIKINA0A087WXM9 373 aa13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 IGKV1D-43A0A0B4J1Z2 117 aa13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 FTCDNL1E5RQL4 147 aa13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 MS4A18H0YCH9 400 aa13.36□□□□□ -0.27
VIPAS39-202ENST00000343765 SCRG1O75711 98 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms