RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 SYT9Q86SS6 491 aa7.4□□□□□ -1.22
ATG4A-201ENST00000343524 NPAS4Q8IUM7 802 aa7.4□□□□□ -1.22
ATG4A-201ENST00000343524 CFAP52Q8N1V2 620 aa7.4□□□□□ -1.22
ATG4A-201ENST00000343524 FAM24BQ8N5W8 94 aa7.4□□□□□ -1.22
ATG4A-201ENST00000343524 HSD17B11Q8NBQ5 300 aa7.4□□□□□ -1.22
ATG4A-201ENST00000343524 OR56A1Q8NGH5 318 aa7.4□□□□□ -1.22
ATG4A-201ENST00000343524 OR4C6Q8NH72 309 aa7.4□□□□□ -1.22
ATG4A-201ENST00000343524 RPS4Y2Q8TD47 263 aa7.4□□□□□ -1.22
ATG4A-201ENST00000343524 NEIL2Q969S2 332 aa7.4□□□□□ -1.22
ATG4A-201ENST00000343524 LRIG1Q96JA1 1093 aa7.4□□□□□ -1.22
ATG4A-201ENST00000343524 SUSD3Q96L08 255 aa7.4□□□□□ -1.22
ATG4A-201ENST00000343524 PBDC1Q9BVG4 233 aa7.4□□□□□ -1.22
ATG4A-201ENST00000343524 SMDT1Q9H4I9 107 aa7.4□□□□□ -1.22
ATG4A-201ENST00000343524 SLC2A8Q9NY64 477 aa7.4□□□□□ -1.22
ATG4A-201ENST00000343524 DNAJB11Q9UBS4 358 aa7.4□□□□□ -1.22
ATG4A-201ENST00000343524 STEAP1Q9UHE8 339 aa7.4□□□□□ -1.22
ATG4A-201ENST00000343524 CSAG2Q9Y5P2 127 aa7.4□□□□□ -1.22
ATG4A-201ENST00000343524 ATRXP46100 2492 aa7.4□□□□□ -1.22
ATG4A-201ENST00000343524 CCDC88CQ9P219 2028 aa7.4□□□□□ -1.22
ATG4A-201ENST00000343524 PTPRZ1P23471 2315 aaPredicted RBP7.4□□□□□ -1.23
ATG4A-201ENST00000343524 A0A087WUJ7 227 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 A0A0B4J2A0 478 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 SMCO3A2RU48 225 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 M0QZ92 97 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 ADAP1O75689 374 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 YIF1AO95070 293 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 CLDN7O95471 211 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 EPPINO95925 133 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 WNT11O96014 354 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 TGFB1P01137 390 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 CD3DP04234 171 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 SERPINA5P05154 406 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 SMIM10L2AP0DMW4 78 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 SMIM10L2BP0DMW5 78 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 MPZP25189 248 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 IMPA1P29218 277 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 TACR3P29371 465 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 NTSP30990 170 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 NDUFA6P56556 154 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 ARF5P84085 180 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 Q499Y3 187 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 TP53I3Q53FA7 332 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 SLC22A25Q6T423 547 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 VITQ6UXI7 678 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 SZRD1Q7Z422 152 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 SLC25A42Q86VD7 318 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 COMTD1Q86VU5 262 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 RANBP3LQ86VV4 465 aaPredicted RBP7.4□□□□□ -1.23
ATG4A-201ENST00000343524 AVL9Q8NBF6 648 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 TMEM40Q8WWA1 233 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 GAL3ST3Q96A11 431 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 TMEM159Q96B96 161 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 AQP10Q96PS8 301 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 STACQ99469 402 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 GFI1Q99684 422 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 RSPO3Q9BXY4 272 aaPredicted RBP7.4□□□□□ -1.23
ATG4A-201ENST00000343524 SELENOIQ9C0D9 397 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 SLC25A18Q9H1K4 315 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 OR51V1Q9H2C8 321 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 MTIF3Q9H2K0 278 aaKnown RBP7.4□□□□□ -1.23
ATG4A-201ENST00000343524 SIRT7Q9NRC8 400 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 CYTL1Q9NRR1 136 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 ZCCHC3Q9NUD5 404 aaKnown RBP7.4□□□□□ -1.23
ATG4A-201ENST00000343524 POT1Q9NUX5 634 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 DOK5Q9P104 306 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 IL20RAQ9UHF4 553 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 SHPKQ9UHJ6 478 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 TRPV2Q9Y5S1 764 aa7.4□□□□□ -1.23
ATG4A-201ENST00000343524 TRANK1O15050 2925 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 A0A0A6YYH2 397 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 ARL5CA6NH57 179 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 A6NJ64 397 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 ZNF726A6NNF4 738 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 M0QZK8 103 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 DVL1O14640 695 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 PQBP1O60828 265 aaKnown RBP7.39□□□□□ -1.23
ATG4A-201ENST00000343524 GGCTO75223 188 aaKnown RBP7.39□□□□□ -1.23
ATG4A-201ENST00000343524 OR2C1O95371 312 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 CYB5AP00167 134 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 LRG1P02750 347 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 AMY2AP04746 511 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 DCNP07585 359 aaKnown RBP7.39□□□□□ -1.23
ATG4A-201ENST00000343524 METTL15P1P0C7V9 234 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 LYL1P12980 280 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 CYBAP13498 195 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 CHATP28329 748 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 SERPINA4P29622 427 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 ADH7P40394 386 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 MAP3K8P41279 467 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 RPS10P46783 165 aaKnown RBP7.39□□□□□ -1.23
ATG4A-201ENST00000343524 LSM6P62312 80 aaKnown RBP7.39□□□□□ -1.23
ATG4A-201ENST00000343524 TRA2BP62995 288 aaKnown RBP7.39□□□□□ -1.23
ATG4A-201ENST00000343524 B4GALNT1Q00973 533 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 TOMM34Q15785 309 aaPredicted RBP7.39□□□□□ -1.23
ATG4A-201ENST00000343524 CDKN3Q16667 212 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 MOGAT2Q3SYC2 334 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 C14orf28Q4W4Y0 310 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 MRPL14Q6P1L8 145 aaKnown RBP7.39□□□□□ -1.23
ATG4A-201ENST00000343524 ZNF529Q6P280 563 aa7.39□□□□□ -1.23
ATG4A-201ENST00000343524 FAM220AQ7Z4H9 259 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms