RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 LHX6Q9UPM6 363 aa8.75□□□□□ -1.01
HOXA1-201ENST00000343060 DTX4Q9Y2E6 619 aa8.75□□□□□ -1.01
HOXA1-201ENST00000343060 HIF3AQ9Y2N7 669 aa8.75□□□□□ -1.01
HOXA1-201ENST00000343060 BRCA2P51587 3418 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 TBC1D3IA0A087WXS9 549 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 C9orf170A2RU37 121 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 DBX1A6NMT0 343 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 EFCAB7A8K855 629 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 FAM171A2A8MVW0 826 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 ZNF736B4DX44 427 aaPredicted RBP8.74□□□□□ -1.01
HOXA1-201ENST00000343060 B3GALT2O43825 422 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 CYB5AP00167 134 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 CRHP06850 196 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 ADH5P11766 374 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 ALOX5APP20292 161 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 PTAFRP25105 342 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 MESP2Q0VG99 397 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 PPP1R1AQ13522 171 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 ELOCQ15369 112 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 ZNF141Q15928 474 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 GXYLT1Q4G148 440 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 FCRL6Q6DN72 434 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 ZNF704Q6ZNC4 412 aaPredicted RBP8.74□□□□□ -1.01
HOXA1-201ENST00000343060 JAZF1Q86VZ6 243 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 ETFBKMTQ8IXQ9 262 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 ZFP82Q8N141 532 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 C15orf54Q8N8G6 183 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 OR4K17Q8NGC6 315 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 SLC39A7Q92504 469 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 MRGPRFQ96AM1 343 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 FOXRED1Q96CU9 486 aaPredicted RBP8.74□□□□□ -1.01
HOXA1-201ENST00000343060 SEC22AQ96IW7 307 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 PRRT1Q99946 306 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 LMF2Q9BU23 707 aaKnown RBP8.74□□□□□ -1.01
HOXA1-201ENST00000343060 LMAN2LQ9H0V9 348 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 WDR76Q9H967 626 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 SLC22A11Q9NSA0 550 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 RNF186Q9NXI6 227 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 KLK13Q9UKR3 277 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 ZNF346Q9UL40 294 aaKnown RBP8.74□□□□□ -1.01
HOXA1-201ENST00000343060 KCNK6Q9Y257 313 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 IGKV1D-42A0A075B6H8 117 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 CPED1A4D0V7 1026 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 IGLON5A6NGN9 336 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 OR52A4PA6NMU1 304 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 C4orf47A7E2U8 309 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 PHYHO14832 338 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 ZNF208O43345 1280 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 FOXS1O43638 330 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 NARSO43776 548 aaKnown RBP8.74□□□□□ -1.01
HOXA1-201ENST00000343060 FGF17O60258 216 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 KAT7O95251 611 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 CT62P0C5K7 136 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 SLC35G6P0C7Q6 338 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 FSTP19883 344 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 ID2Q02363 134 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 EXOSC7Q15024 291 aaKnown RBP8.74□□□□□ -1.01
HOXA1-201ENST00000343060 GFOD2Q3B7J2 385 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 RNF212Q495C1 297 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 TCEAL5Q5H9L2 206 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 WDR38Q5JTN6 314 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 UNQ6126/PRO20091Q6UXV3 157 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 ZNF600Q6ZNG1 722 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 DOK4Q8TEW6 326 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 SMARCD2Q92925 531 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 SAT2Q96F10 170 aaPredicted RBP8.74□□□□□ -1.01
HOXA1-201ENST00000343060 CCNL2Q96S94 520 aaPredicted RBP8.74□□□□□ -1.01
HOXA1-201ENST00000343060 PHB2Q99623 299 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 CDC6Q99741 560 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 TCEAL7Q9BRU2 100 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 TWSG1Q9GZX9 223 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 CST11Q9H112 138 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 TREM1Q9NP99 234 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 LPAR3Q9UBY5 353 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 MSRAQ9UJ68 235 aa8.74□□□□□ -1.01
HOXA1-201ENST00000343060 GOLGA4Q13439 2230 aaKnown RBP8.73□□□□□ -1.01
HOXA1-201ENST00000343060 LTBP2Q14767 1821 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 EIF1AYO14602 144 aaKnown RBP8.73□□□□□ -1.01
HOXA1-201ENST00000343060 OR2T1O43869 369 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 IGKV1D-16P01601 117 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 LYL1P12980 280 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 PGAM2P15259 253 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 NFYBP25208 207 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 PSMB6P28072 239 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 SDHAP31040 664 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 EIF1AXP47813 144 aaKnown RBP8.73□□□□□ -1.01
HOXA1-201ENST00000343060 CAV2P51636 162 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 SNRPEP62304 92 aaKnown RBP8.73□□□□□ -1.01
HOXA1-201ENST00000343060 FAM53BQ14153 422 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 KCNAB1Q14722 419 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 DEFB134Q4QY38 66 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 PAPD4Q6PIY7 484 aaKnown RBP8.73□□□□□ -1.01
HOXA1-201ENST00000343060 SLC16A13Q7RTY0 426 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 RCBTB1Q8NDN9 531 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 FAM174AQ8TBP5 190 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 NUDCD2Q8WVJ2 157 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 PTX4Q96A99 478 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 ARL5BQ96KC2 179 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 SMIM8Q96KF7 97 aa8.73□□□□□ -1.01
HOXA1-201ENST00000343060 TSSK2Q96PF2 358 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms