RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 OR10H5Q8NGA6 315 aa15.42■□□□□ 0.06
CLDN4-201ENST00000340958 ABHD17AQ96GS6 310 aa15.42■□□□□ 0.06
CLDN4-201ENST00000340958 MNTQ99583 582 aa15.42■□□□□ 0.06
CLDN4-201ENST00000340958 TIMP4Q99727 224 aa15.42■□□□□ 0.06
CLDN4-201ENST00000340958 CDADC1Q9BWV3 514 aa15.42■□□□□ 0.06
CLDN4-201ENST00000340958 MRPL13Q9BYD1 178 aaKnown RBP15.42■□□□□ 0.06
CLDN4-201ENST00000340958 SEC61A2Q9H9S3 476 aa15.42■□□□□ 0.06
CLDN4-201ENST00000340958 ISYNA1Q9NPH2 558 aa15.42■□□□□ 0.06
CLDN4-201ENST00000340958 COPS3Q9UNS2 423 aa15.42■□□□□ 0.06
CLDN4-201ENST00000340958 TLN1Q9Y490 2541 aaKnown RBP15.41■□□□□ 0.06
CLDN4-201ENST00000340958 CYTIPO60759 359 aa15.41■□□□□ 0.06
CLDN4-201ENST00000340958 PDGFAP04085 211 aa15.41■□□□□ 0.06
CLDN4-201ENST00000340958 QDPRP09417 244 aa15.41■□□□□ 0.06
CLDN4-201ENST00000340958 GADD45AP24522 165 aa15.41■□□□□ 0.06
CLDN4-201ENST00000340958 PSMA1P25786 263 aaKnown RBP15.41■□□□□ 0.06
CLDN4-201ENST00000340958 GUCA1AP43080 201 aaPredicted RBP15.41■□□□□ 0.06
CLDN4-201ENST00000340958 CAPZA2P47755 286 aa15.41■□□□□ 0.06
CLDN4-201ENST00000340958 OR12D2P58182 307 aa15.41■□□□□ 0.06
CLDN4-201ENST00000340958 TIMM50Q3ZCQ8 353 aa15.41■□□□□ 0.06
CLDN4-201ENST00000340958 TP53I3Q53FA7 332 aa15.41■□□□□ 0.06
CLDN4-201ENST00000340958 SOWAHCQ53LP3 525 aaPredicted RBP15.41■□□□□ 0.06
CLDN4-201ENST00000340958 SSX6Q7RTT6 188 aa15.41■□□□□ 0.06
CLDN4-201ENST00000340958 DPY19L4Q7Z388 723 aa15.41■□□□□ 0.06
CLDN4-201ENST00000340958 FAM220AQ7Z4H9 259 aa15.41■□□□□ 0.06
CLDN4-201ENST00000340958 RFLNBQ8N5W9 214 aa15.41■□□□□ 0.06
CLDN4-201ENST00000340958 ZFP41Q8N8Y5 198 aa15.41■□□□□ 0.06
CLDN4-201ENST00000340958 ABHD3Q8WU67 409 aa15.41■□□□□ 0.06
CLDN4-201ENST00000340958 ZNF649Q9BS31 505 aa15.41■□□□□ 0.06
CLDN4-201ENST00000340958 EXOSC4Q9NPD3 245 aaKnown RBP15.41■□□□□ 0.06
CLDN4-201ENST00000340958 SPRR3Q9UBC9 169 aa15.41■□□□□ 0.06
CLDN4-201ENST00000340958 B3GNT3Q9Y2A9 372 aa15.41■□□□□ 0.06
CLDN4-201ENST00000340958 PHYHO14832 338 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 MEP1BQ16820 701 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 OTPQ5XKR4 325 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 ABLIM2Q6H8Q1 611 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 Q6ZS92 163 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 AAED1Q7RTV5 226 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 PHC2Q8IXK0 858 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 MCHR2Q969V1 340 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 OR2M2Q96R28 347 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 CHCHD6Q9BRQ6 235 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 GLTPQ9NZD2 209 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 KLHL9Q9P2J3 617 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 IKZF2Q9UKS7 526 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 IGKV1D-43A0A0B4J1Z2 117 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 PSMD9O00233 223 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 MAGEB4O15481 346 aaPredicted RBP15.4■□□□□ 0.06
CLDN4-201ENST00000340958 TMCC2O75069 709 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 SLC43A1O75387 559 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 GABARAPO95166 117 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 MPZL1O95297 269 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 CPEP16870 476 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 CELP19835 753 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 RPS27P42677 84 aaKnown RBP15.4■□□□□ 0.06
CLDN4-201ENST00000340958 SELENOPP49908 381 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 ENTPD1P49961 510 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 GBX2P52951 348 aaPredicted RBP15.4■□□□□ 0.06
CLDN4-201ENST00000340958 DOC2BQ14184 412 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 SSX1Q16384 188 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 SLC18B1Q6NT16 456 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 SLC16A12Q6ZSM3 486 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 CDC20BQ86Y33 519 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 FNDC9Q8TBE3 224 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 WBP1Q96G27 269 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 DOK1Q99704 481 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 DCUN1D5Q9BTE7 237 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 OCEL1Q9H607 264 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 EMC3Q9P0I2 261 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 POLR1DQ9Y2S0 133 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 FLVCR1Q9Y5Y0 555 aa15.4■□□□□ 0.06
CLDN4-201ENST00000340958 CFAP46Q8IYW2 2715 aa15.39■□□□□ 0.05
CLDN4-201ENST00000340958 ZNF716A6NP11 495 aa15.39■□□□□ 0.05
CLDN4-201ENST00000340958 K7EM74 188 aa15.39■□□□□ 0.05
CLDN4-201ENST00000340958 GPR171O14626 319 aa15.39■□□□□ 0.05
CLDN4-201ENST00000340958 KRT8P05787 483 aa15.39■□□□□ 0.05
CLDN4-201ENST00000340958 TACSTD2P09758 323 aa15.39■□□□□ 0.05
CLDN4-201ENST00000340958 LAP3P28838 519 aa15.39■□□□□ 0.05
CLDN4-201ENST00000340958 TAS2R43P59537 309 aa15.39■□□□□ 0.05
CLDN4-201ENST00000340958 VBP1P61758 197 aa15.39■□□□□ 0.05
CLDN4-201ENST00000340958 PLEKHG7Q6ZR37 379 aa15.39■□□□□ 0.05
CLDN4-201ENST00000340958 VASH1Q7L8A9 365 aaPredicted RBP15.39■□□□□ 0.05
CLDN4-201ENST00000340958 RBMXL3Q8N7X1 1067 aaKnown RBP15.39■□□□□ 0.05
CLDN4-201ENST00000340958 RPL3LQ92901 407 aaKnown RBP15.39■□□□□ 0.05
CLDN4-201ENST00000340958 TMEM203Q969S6 136 aa15.39■□□□□ 0.05
CLDN4-201ENST00000340958 INTS12Q96CB8 462 aaKnown RBP15.39■□□□□ 0.05
CLDN4-201ENST00000340958 WDYHV1Q96HA8 205 aa15.39■□□□□ 0.05
CLDN4-201ENST00000340958 BCL7BQ9BQE9 202 aa15.39■□□□□ 0.05
CLDN4-201ENST00000340958 OR51E2Q9H255 320 aa15.39■□□□□ 0.05
CLDN4-201ENST00000340958 MARCH7Q9H992 704 aa15.39■□□□□ 0.05
CLDN4-201ENST00000340958 NDUFB11Q9NX14 153 aa15.39■□□□□ 0.05
CLDN4-201ENST00000340958 TNRC6AQ8NDV7 1962 aaKnown RBP15.39■□□□□ 0.05
CLDN4-201ENST00000340958 SLC22A1O15245 554 aa15.38■□□□□ 0.05
CLDN4-201ENST00000340958 ATE1O95260 518 aa15.38■□□□□ 0.05
CLDN4-201ENST00000340958 IGHG3P01860 377 aa15.38■□□□□ 0.05
CLDN4-201ENST00000340958 CPN1P15169 458 aa15.38■□□□□ 0.05
CLDN4-201ENST00000340958 EIF2B1Q14232 305 aaKnown RBP15.38■□□□□ 0.05
CLDN4-201ENST00000340958 CTF1Q16619 201 aa15.38■□□□□ 0.05
CLDN4-201ENST00000340958 CDONQ4KMG0 1287 aa15.38■□□□□ 0.05
CLDN4-201ENST00000340958 PLXDC2Q6UX71 529 aa15.38■□□□□ 0.05
CLDN4-201ENST00000340958 SYS1Q8N2H4 156 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms